Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00788 ATGGATTTTGGGTTTGGTGAAGAGAGAGGTAAGTTACCTTTTTCATACTCGTCTTCCTCTTCCTCTCCTTCCTCTTCTTCGCAGTACAAAACAGCCAATCTGATGCCTCTAGGCAACAACGAAAGCTGGGAGTCTCGTCTTTACGACAACTACCAGCAGCAGCCGAGAGGGTTTGAGCTGATGGCTGCAAACGACGAAGTAGGGAGGAGGTATGGAGATTCAGACGGCCATGGGAGTAGAGGAAGCTTTTGTATGGAGAAGGAGCACATGTTTGACAAAGTTGTCACCCCTAGTGACGTCGGAAAACTGAATCGGCTGGTAATTCCGAAACAGCACGCAGAAAAGTATTTTCCTCTTGATTCATCCACCAACGAGAAAGGTCTCCTTCTAAATTTCGAAGATCGGAATGGAAAGCCATGGCGATTCCGGTACTCCTACTGGAATAGCAGCCAAAGCTACGTTATGACAAAAGGATGGAGCCGGTTTGTCAAGGAGAAGAAGCTAGACGCAGGCGACATTGTTTCCTTCCAGCGTGGAGTTGGGGAGGCGGGAAAAGACCATCTTTACATCGACTGGTGGCGCCGCCCAGAAGCGTCTGCACCAGCAGCGACGCTTGGCGGAAACATAGCACTAATTCCACACCAATTCTCATTCCACCACCACCATTCAGTCCCTTGGAGCCCTTTGCTCCTCCGTCCCATGCCGGCTGCAACATCCTTGTCTATGCCACGGGACCACTTGCACTTGTCGCAATTAAACAACAATGTCGTCCACAGAGGAGGTGCCGCCGTTTACGGTGGGGTGATGAACCCAAACCCACAACCAAATTGCTCAAACGGGTCGATTGTTTACTTCAGGTCGGCACCAGCAGGGCCACAAGTGCAACCATTGGGGGCGGCGCAAGTTCAACCGGGAGGTGGAGTGGAGCGGATGGTCTTTGATTCGGTCCCAGTGGTCCACGGAAAAGTGGCTGCCAAGAGACTGAGGCTATTTGGAGTTAACATGGAGTGCCCCACACCAGAATCCAACGGTAGCCGGGAGGCGGCCGGATCTCATCAGCTGCCTCGTCTTCCTTCTTCCAATTCTCAGTCTCCTCTTCAAGTGAAGCTCATTAACAGCACCCCAATCCCTCCCCATTTTCTCAACAACGAAAAACCTACTTCCATGTCCTTAGATTTCGACATTTGA 1188 51.26 MDFGFGEERGKLPFSYSSSSSSPSSSSQYKTANLMPLGNNESWESRLYDNYQQQPRGFELMAANDEVGRRYGDSDGHGSRGSFCMEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGEAGKDHLYIDWWRRPEASAPAATLGGNIALIPHQFSFHHHHSVPWSPLLLRPMPAATSLSMPRDHLHLSQLNNNVVHRGGAAVYGGVMNPNPQPNCSNGSIVYFRSAPAGPQVQPLGAAQVQPGGGVERMVFDSVPVVHGKVAAKRLRLFGVNMECPTPESNGSREAAGSHQLPRLPSSNSQSPLQVKLINSTPIPPHFLNNEKPTSMSLDFDI 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32848880 32850067 - BLOR11969 Blo03g00788 58252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00788 395 Pfam B3 DNA binding domain 91 195 IPR003340 GO:0003677
Blo03g00788 395 Gene3D - 84 202 IPR015300 -
Blo03g00788 395 CDD B3_DNA 89 190 IPR003340 GO:0003677
Blo03g00788 395 MobiDBLite consensus disorder prediction 339 365 - -
Blo03g00788 395 MobiDBLite consensus disorder prediction 13 33 - -
Blo03g00788 395 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 59 360 IPR044800 GO:0003700
Blo03g00788 395 MobiDBLite consensus disorder prediction 1 33 - -
Blo03g00788 395 ProSiteProfiles B3 DNA-binding domain profile. 91 196 IPR003340 GO:0003677
Blo03g00788 395 SUPERFAMILY DNA-binding pseudobarrel domain 88 197 IPR015300 -
Blo03g00788 395 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 59 360 - -
Blo03g00788 395 SMART B3_2 91 196 IPR003340 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g00788 Blo19g00130 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00788 Blo-Chr3:32848880 Blo12g00198 Blo-Chr12:12940147 1.06E-89 dispersed
Blo14g00593 Blo-Chr14:9848701 Blo03g00788 Blo-Chr3:32848880 2.37E-08 transposed
Blo19g00130 Blo-Chr19:3745824 Blo03g00788 Blo-Chr3:32848880 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12128 PF02362 B3 1.50E-28 CL0405 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00788 - - tcc:18605928 384.8