Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00789 ATGGCGGTTGCAACCACTAAGCTTCTTGTATCTGACATTGCATCAGAAGTTAATGTTGTCCCTCCAAACTATGTCCGACCAATCTCTGACCGTCCTAATCTGTCACATGTTCTCTTTGACGTTTCCATTCCTCTCATTGATCTTAATGACCTCTACGGTCATCGTCGTTCTACTATCATCCAACAGATTGCCACCGCTTGCAAGCAAGATGGTTTTTTTCAGGTAAAGAACCATGGAGTGCCGGAAGAGATGATGGGAAACATGCTGGATTTGGCGAGGGAGTTTTTCCGGTTACCGGAGAGCGAAAGGCTGAAGAGTTACTCCGAAGACCCGAGGAAGACAACAAGGCTTTCGACCAGTTTTAACGTCAAGACGGAGAAGGTGTCCAATTGGAGAGATTTTCTGCGACTCCATTGTTACCCTCTGGAAAACTATGTTCATGAATGGCCCTCAAACCCTCCCTCTTTCCGAAAGGAAGTGGCGGAGTACTGCACCAGCGTGAGAGGACTGGTGCAGAGACTGCTGGAAGCCATGTCCGAGAGCTTGGGGCTGGAAAGAGAGTTCATATGGAAGACGGCGATCGGAAAACATGGGCAGCACATGGCGATGAACTACTATCCATCCTGCCCTCAGCCGGAGCTCACCTACGGCCTACCTTCCCACACCGACCCTAACCTCATCACCGTCCTCCTCCAAGACCATGTGCCTGGTTTACAAGTTTACAGAAATGGAAAGTGGGTAGCTGTTAATCCCATTCCCAACACCTTCATTGTCAACATCGGCGATCAAATGCAGGTTCTAAGCAACAATGCGTACAAAAGTGTTCTTCATCGAGCCATAGTTAACAGCAGGGTCGAACGGATATCCATCCCGACGTTCTACTGTCCGTCTCCAGATGCACTGATCGGTCCGGCGAAGGGCTTGATAGATTCTGATCGGCTGGCAGTTTATCGAGATTTTACGTACGCCGAATACTTTGAGAAATTCTGGAACAGAGGACTCGAATCTGAATGCTGTTTGGATATATGCACTGATTGGTCTGGTGAAGAGCTGATAGATTCTGATGGTGGGCAGTTTATCGAGATTTTAAGTCAAGATCTGGTTCAACCACAAGAAATTGGTATCAGAGTCATTTCGATCGGGATGGCAAAAGCGAGTTCTAAGAAGAGTGAAGATCATTGGCAGCGAATGGAACGATCTGACACTAAGCATGACGAGATTATGTTGGCGTTAAATCAACAGTTACAACTGCAAGCATATGCGAGGCAAAAACAACCTACAGACGGTGAAACGGAAGTTAAAGAACTAGAGATTGTTGCTCCAGATTTCACATCCACAAAAATAGCAGTTGAAGAACTAAAGATTGTTGCTCCAGATTTCACATCTATAGAAACGGAAATTGAAGAACTAGAAATGGTTGCTCTAGATTTCACATCCACAATTGCAACAGGAAGTCTAATTTTGAAAAATGAGTTGAAGAATACGGATGTGAGGTATTTTCTTCCTACGGATTTTGTGAAAAAAGTTGAAATAGGAAGTCCAGTTTTGGACAATAATTTGGATGTTCAAGAGGTGGATCGAGGCACTAGTGGTTTCTTCATTGTTAGAGATTCAGAATCTGAATCGGATCAACAAGTGACTGTTGAGTCCCTCCTACCACATTTCACTGGGCGGATAAAAACCAATGGACATGTTTCAAATCTACAATGTCATTATCAGTCTTCTGAAAACTTGTTGTCATTACATAACATGTTTATATTTGATCCAGGTGGAAGGAATTTATCCTTGGAAGGTAAAGTTGTTCAGAACAACTTTGTCTATGAATGTACCATGTTGGTGCATCCTATTCATAGCAACATACCACCTATGAAACTAATGAGACATCCAGAATTTTTTGATAATGATGGCAATGGAAAGTTAGAAGATGAAGCACGAAAATACTTGCAGTTTCTCAATGCGGCTGATTATTGTCAAGGCAAGGGTGTTTTTCCTTTGGACCTTGAACTTGAAAGTACGTTGAACAAATCTAATGAAATAATTACAGTTTTTGATTTTAGATTGAGAGATCTGCTTGTGGCATCATTTCTGAATATAGTTTGTTCTCCTCATAATGAAACAGAGAGCTGCACCTTCTAA 2136 42.93 MAVATTKLLVSDIASEVNVVPPNYVRPISDRPNLSHVLFDVSIPLIDLNDLYGHRRSTIIQQIATACKQDGFFQVKNHGVPEEMMGNMLDLAREFFRLPESERLKSYSEDPRKTTRLSTSFNVKTEKVSNWRDFLRLHCYPLENYVHEWPSNPPSFRKEVAEYCTSVRGLVQRLLEAMSESLGLEREFIWKTAIGKHGQHMAMNYYPSCPQPELTYGLPSHTDPNLITVLLQDHVPGLQVYRNGKWVAVNPIPNTFIVNIGDQMQVLSNNAYKSVLHRAIVNSRVERISIPTFYCPSPDALIGPAKGLIDSDRLAVYRDFTYAEYFEKFWNRGLESECCLDICTDWSGEELIDSDGGQFIEILSQDLVQPQEIGIRVISIGMAKASSKKSEDHWQRMERSDTKHDEIMLALNQQLQLQAYARQKQPTDGETEVKELEIVAPDFTSTKIAVEELKIVAPDFTSIETEIEELEMVALDFTSTIATGSLILKNELKNTDVRYFLPTDFVKKVEIGSPVLDNNLDVQEVDRGTSGFFIVRDSESESDQQVTVESLLPHFTGRIKTNGHVSNLQCHYQSSENLLSLHNMFIFDPGGRNLSLEGKVVQNNFVYECTMLVHPIHSNIPPMKLMRHPEFFDNDGNGKLEDEARKYLQFLNAADYCQGKGVFPLDLELESTLNKSNEIITVFDFRLRDLLVASFLNIVCSPHNETESCTF 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32915484 32918961 + BLOR11970 Blo03g00789 58253

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00789 711 Pfam 2OG-Fe(II) oxygenase superfamily 199 296 IPR044861 -
Blo03g00789 711 PANTHER PROTEIN DMR6-LIKE OXYGENASE 2-LIKE 5 338 - -
Blo03g00789 711 Gene3D - 4 333 IPR027443 -
Blo03g00789 711 Pfam non-haem dioxygenase in morphine synthesis N-terminal 43 151 IPR026992 -
Blo03g00789 711 SUPERFAMILY Clavaminate synthase-like 14 333 - -
Blo03g00789 711 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 5 338 - -
Blo03g00789 711 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 196 296 IPR005123 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00789 K24028 DMR6, DLO; salicylic acid 3-hydroxylase [EC:1.14.11.-] - qsu:112039312 547.74
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00013 Blo-Chr3:1091194 Blo03g00789 Blo-Chr3:32915484 3.07E-44 dispersed
Blo03g00789 Blo-Chr3:32915484 Blo03g00792 Blo-Chr3:32989624 0 dispersed
Blo04g00474 Blo-Chr4:3924975 Blo03g00789 Blo-Chr3:32915484 2.74E-59 dispersed
Blo16g00079 Blo-Chr16:2182628 Blo03g00789 Blo-Chr3:32915484 2.63E-67 dispersed
Blo03g00789 Blo-Chr3:32915484 Blo03g00791 Blo-Chr3:32954546 0 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g274 . . Bda06g01126 . . . . . . Cmo16g01283 . Cma15g01333 . Car15g01198 . . . . . . . . . . . . . . . . . . . . . Lsi07g01105 . . . Blo03g00789 . . . . Bpe11g00380 . . . . Cmo15g01395 . Cma16g01237 . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007284 0 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 0 1 1 1 1 3 2 1 1 1 1 3 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo03g00789 Blo_Chr03 FPKM 21.579403 19.020529 26.286646 21.564508 16.858362 18.628696 15.958627 22.773687 21.155096 24.023243