Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00790 ATGCGAAAACTTTGCATAGCAGTTGTGCTTTGTGTCGTATTTGTGAGCATAGAAGTTGTCGGTGGTGTTAAAGCGGACAGTCTCGCTATTTTGACTGATACTGCTCATTTGCTGTCCGATGTGGCTGCCTTTGCAATTTCCCTGTTTTCCATTTGGACATCTGGGTGGGAGGCAACTCCTCGGCAGTCTTATGGTTTCTTCCGAATTGAATATTGGGTGCTCTTTCAAGGGCTTTCTGATGTTTGTGTTTCCGCCTTCGGTCTAGTGGTTAATATAGCCATGGCTCTGCTACTCGGCCACAATCACAGCCATTTGCATGGCCACAGTCACGACCATGGGGCCGGGGTTCATGGGGATAGCCATGAGGATCATGACGAAAGGCATCGACACGGAATAAGTGTAACAGCCACCCACCACCACCACCAAGGTGGCTCGAAGAACAACGATAAGCATCAACATTCCCACAAGGAAAATCTGACTGAGCCCCTTCTCGATAGACCAAAGACTAGTCAGGACAAACAAAAGCAACAAAGAAACATCAATGTCCAAGGCGGATATCTACACGTACTAGGAGCCTCCATACAAAGCGTTGGAATCATGATTGGTGGGGCAATCATATGGTTCAAGCCCGAGTGGAAGATTTGA 645 47.75 MRKLCIAVVLCVVFVSIEVVGGVKADSLAILTDTAHLLSDVAAFAISLFSIWTSGWEATPRQSYGFFRIEYWVLFQGLSDVCVSAFGLVVNIAMALLLGHNHSHLHGHSHDHGAGVHGDSHEDHDERHRHGISVTATHHHHQGGSKNNDKHQHSHKENLTEPLLDRPKTSQDKQKQQRNINVQGGYLHVLGASIQSVGIMIGGAIIWFKPEWKI 214
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 32936706 32937419 - BLOR11971 Blo03g00790 58254
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00790 214 MobiDBLite consensus disorder prediction 107 126 - -
Blo03g00790 214 Gene3D Cation efflux protein transmembrane domain 1 79 IPR027469 -
Blo03g00790 214 Pfam Cation efflux family 5 73 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Blo03g00790 214 PANTHER METAL TOLERANCE PROTEIN A1 77 214 - -
Blo03g00790 214 PANTHER METAL TOLERANCE PROTEIN A1 1 70 - -
Blo03g00790 214 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 70 - -
Blo03g00790 214 MobiDBLite consensus disorder prediction 135 179 - -
Blo03g00790 214 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 77 214 - -
Blo03g00790 214 SUPERFAMILY Cation efflux protein transmembrane domain-like 2 210 IPR027469 -
Blo03g00790 214 MobiDBLite consensus disorder prediction 108 126 - -
Blo03g00790 214 MobiDBLite consensus disorder prediction 147 173 - -
Blo03g00790 214 TIGRFAM CDF: cation diffusion facilitator family transporter 2 71 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00790 Blo-Chr3:32936706 Blo03g00794 Blo-Chr3:33037777 3.45E-104 proximal
Blo19g00131 Blo-Chr19:3799205 Blo03g00790 Blo-Chr3:32936706 2.28E-112 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00790 K14689 - qsu:112039309 261.536