Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00801 ATGGAGGTCTTTCAGATTTCTAACTCTACTCTGCTTGTGTCCCTTTTTGCAACTTTCTTTCTCTCTACGTTCACTGTTCCATGTTATTCATTCATTTCGTTCGTGTTTGGGGATTCTCTCGTTGACGCCGGGAACAATAATTACATATTTACCCTATCGAAGGCGGATTCCCCTCCTTATGGCATCGACTTCGAGGCCTCTGGCGGCCAACCCACCGGAAGATTCACCAATGGGCAATCTCTAGGAGCAGCCTCTTTCCCTCCACCTTACTTGGCACCAAATACGAAAGATGAGACAGTGATTCTGAGAGGAATCAATTACGCTTCAGGAGCCTCTGGGATTTTGGATGAAACTGGCTTCATTTTTTTGGGAAGAATTCCTCTGAGGGTACAAGTGAATAATTTCGAGGAAACTAGGGCTTACTTGGCTCAACGAAAAGGGGAGAATCAAACAAATGAGTCACTAAAAAAGGCTATCTTCTCTCTAACCATTGGATCAAACGATGTTCTTAACTCTATCCAACCCTCCATTCCATTTTTCACTGATCGCGAGGCTAAGGACTTCTCCACTATTCAGCAAGACACTATGATTTCAAACTTGACCCTAAACCTTAAGCGATTGCACAAGTTAGGAGCAAGAAAATTTGTGGTAGTTGGAATTGGACCTTTAGGATGCATACCCTTTGTACGTGCATTGAAGTTGCAACCAAGTGGAGAGTGCTCAGCCGAAGTGAATAGCTTAATCCAAGGTTATAATAAGAAACTTAGTAAGATGCTACATCAACTAAACCAAGAACTCGGTCCCGAGGCCATCTTCATTTACGCTAATTCCTACGATATAGTCACGAAGATTATAGCTAATTTTCGCCAATATGGGTTTGAGAATGCCAATGAGCCATGTTGTGGAGGATACTTCCCACCCTTTGTTTGCTTTAAAAATCGGAGTGGGAACTTGTCGTCTTCATTGTGTGAGGATCGATCGAAGTATGTGTTTTGGGATGCATACCACCCCACAGAAGCTACGAACATAATCATCGCCAATGAGTTAATAAATGGCGATCCGAGTATTATGTTTCCAATCAACATCCGTCAGCTTTCTAGCTACATGTCGTAG 1113 42.86 MEVFQISNSTLLVSLFATFFLSTFTVPCYSFISFVFGDSLVDAGNNNYIFTLSKADSPPYGIDFEASGGQPTGRFTNGQSLGAASFPPPYLAPNTKDETVILRGINYASGASGILDETGFIFLGRIPLRVQVNNFEETRAYLAQRKGENQTNESLKKAIFSLTIGSNDVLNSIQPSIPFFTDREAKDFSTIQQDTMISNLTLNLKRLHKLGARKFVVVGIGPLGCIPFVRALKLQPSGECSAEVNSLIQGYNKKLSKMLHQLNQELGPEAIFIYANSYDIVTKIIANFRQYGFENANEPCCGGYFPPFVCFKNRSGNLSSSLCEDRSKYVFWDAYHPTEATNIIIANELINGDPSIMFPINIRQLSSYMS 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33209751 33211525 - BLOR11982 Blo03g00801 58265

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00801 370 CDD SGNH_plant_lipase_like 34 353 IPR035669 -
Blo03g00801 370 Pfam GDSL-like Lipase/Acylhydrolase 34 348 IPR001087 GO:0016788
Blo03g00801 370 Gene3D SGNH hydrolase 33 352 IPR036514 -
Blo03g00801 370 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 21 367 - -
Blo03g00801 370 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN 21 367 - -
Blo03g00801 370 SUPERFAMILY SGNH hydrolase 106 351 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00801 - - - pvy:116120921 514.998
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00801 Blo-Chr3:33209751 Blo04g01027 Blo-Chr4:13745781 1.17E-94 dispersed
Blo03g00801 Blo-Chr3:33209751 Blo16g00424 Blo-Chr16:16562720 1.47E-94 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g244 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa05g00163 Chy09g01334 . Blo03g00801 . . . . Bpe11g00371 . . . . . . . . . . . Bhi12g00084 . . . . . Lcy12g1518 Cla01g00145 Cam01g0150 Cec01g0146 Cco01g0152 Clacu01g0145 Cmu01g0145 Cre09g2361 Lsi09g00136 . . Cme09g01882
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013076 0 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo03g00801 Blo_Chr03 FPKM 5.098929 4.257987 1.333379 1.335146 5.305667 5.083283 4.446037 1.807583 1.213946 1.660079