Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00811 ATGTTTACATGCGTAGCATGCACGAAGAAACTGGGAAAGGCAGAGAGAGGAAGAGAGGAAGAAGAAATGGTGGGAAGCAGTAGCACCCCAAGTACAAAAGAAGCCGTCAAAAGCCTGACGGCGCAGATTAAGGAGATGGCGTTGAAATTCTCTGGCGCCTACAGGCAACGCAAGCCATGCGTGGCCCCAGGAATGTGCAAGAAAAATCATAGACCTCACTCAGGTGTTGACATGGCTGACTCGAATGGAACTCCATATCCCTTCGATGGAGGTGGAAGCTCAACTGCAACACAGCCATGGAAGTTCGCGGGCGTTGCTCATGCCACGACTTCTCGATCAAATGCGAGAATTTCTCACGTTGCCTCTGTCTCCACTGGATCTTATAACGTGGTGTTAGAAGATGAGAACGAGCCAAAGGAGTGGGCGGCACAGGTTGAGCCTGGTGTTCTCATTACTTTTATGTCACTCCCTAATGGTGGAAATGATCTAAAACGTATTCGCTTCTGTCGGGACATGTTTAACAAATGTCAAGCTCAGCAATGGTGGGGCGAAAACTATGACCTGATCATGGAGCTTTACAATGTCCAGAGATTCAACCGGCAGGCTCTTCACACTCCGCCGAGGTCGGAAGATGTGGTATACTCTCTCGATGCATCACGAATGACAAGCTCATCACGGGACGACGGCTCTGTTTCGATTAGCAATGTAAGCGACGTCGAGTCCGAATGGGTTGAGGAGGACGAACCCGGTGTGTATATAACTATCAGACAACTTCTGGACGGGACCCGAGAGCTTCGTCGCGTCCGATTTAGTCGGGAAAAGTTTGGCGAGGTAAGAGCTAAGCAATGGTGGGAAGAGAATAGAGAGAGAGTGGAAGCGCGGTACCTATGA 891 49.94 MFTCVACTKKLGKAERGREEEEMVGSSSTPSTKEAVKSLTAQIKEMALKFSGAYRQRKPCVAPGMCKKNHRPHSGVDMADSNGTPYPFDGGGSSTATQPWKFAGVAHATTSRSNARISHVASVSTGSYNVVLEDENEPKEWAAQVEPGVLITFMSLPNGGNDLKRIRFCRDMFNKCQAQQWWGENYDLIMELYNVQRFNRQALHTPPRSEDVVYSLDASRMTSSSRDDGSVSISNVSDVESEWVEEDEPGVYITIRQLLDGTRELRRVRFSREKFGEVRAKQWWEENRERVEARYL 296
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33497112 33498641 + BLOR11992 Blo03g00811 58275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00811 296 PANTHER PROTEIN BREVIS RADIX-LIKE 1 215 296 - -
Blo03g00811 296 Pfam Transcription factor BRX N-terminal domain 26 60 IPR027988 -
Blo03g00811 296 ProSiteProfiles BRX domain profile. 139 194 IPR013591 -
Blo03g00811 296 Pfam Transcription factor regulating root and shoot growth via Pin3 139 193 IPR013591 -
Blo03g00811 296 Pfam Transcription factor regulating root and shoot growth via Pin3 240 295 IPR013591 -
Blo03g00811 296 ProSiteProfiles BRX domain profile. 241 296 IPR013591 -
Blo03g00811 296 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 212 - -
Blo03g00811 296 PANTHER PROTEIN BREVIS RADIX-LIKE 1 215 296 IPR044532 -
Blo03g00811 296 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 212 IPR044532 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00811 Blo-Chr3:33497112 Blo06g00745 Blo-Chr6:30650359 4.40E-09 dispersed
Blo19g00147 Blo-Chr19:5144319 Blo03g00811 Blo-Chr3:33497112 1.58E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00811 - - dzi:111291464 359.762