Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00836 ATGGCTGGTTTGGATTTAGGCAATCGTTATGTTCATCCGCTTCACTTACCAGACTTGCACCTCCAAAGGCCTGTTCAGTCTCATCAACCTGCAAATTCTGAGGAAGATCTCAATCATGGCGGTCACTTTTCTGCTGATGATGGATCTCACCAAGGCTTAGACCTTGTCGGAGGTAACGCCGGAGATATCATTGGCCGACGCCCTCGCGGGAGGCCTCCCGGATCCAAAAATAAGCCTAAGCCGCCGGTTATAATCACACGGGAGAGTGCCAACACTCTTCGAGCTCATATTCTCGAGGTTGGCAGTGGCAGTGATGTGTTCGACTGTGTCGCTACCTACGCTCGCCGTAGGCAGCGCGGGATCTGCATCTTGAGCGGGAGTGGCACGGTGACTAATGTTAGCTTGAGACAACCGGCGGTGGCTGGGGCCGTCGTAACCCTACATGGGAGATTTGAGATACTATCGCTTTCTGGCTCGTTTTTGCCTCCTCCTGCTCCTCCTGGAGCGACGAGTCTGACGATATTTCTGGCAGGCGGTCAAGGGCAAGTGGTGGGTGGAAGTGTCGTTGGAGAGCTCACTGCAGCTGGGCCTGTAATCCTCATCGCCGCATCGTTTACTAATGTGGCCTACGAGAGACTTCCGTTGGACGAGGAGGAGAATCTGCCTGTGCAGCCGTCTGATTCTCCGGCGACTGGAAGTGGTAGTGGCGTGGGGAATAACCCATTTACGGATCCTTCTTCCGGACTTCCTTTCTACAATCTGCCGCTTAATTTACAGAACGTTCAGCTTCCGGGCGATGGTTGGGCAAATAATTCAGTAGCTCGTCCTCCATTTTGA 837 53.41 MAGLDLGNRYVHPLHLPDLHLQRPVQSHQPANSEEDLNHGGHFSADDGSHQGLDLVGGNAGDIIGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGSGSDVFDCVATYARRRQRGICILSGSGTVTNVSLRQPAVAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVILIAASFTNVAYERLPLDEEENLPVQPSDSPATGSGSGVGNNPFTDPSSGLPFYNLPLNLQNVQLPGDGWANNSVARPPF 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 34084725 34085561 + BLOR12017 Blo03g00836 58300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00836 278 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 278 IPR014476 GO:0003680
Blo03g00836 278 MobiDBLite consensus disorder prediction 24 83 - -
Blo03g00836 278 Gene3D - 93 225 - -
Blo03g00836 278 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 1 278 - -
Blo03g00836 278 MobiDBLite consensus disorder prediction 224 246 - -
Blo03g00836 278 MobiDBLite consensus disorder prediction 218 246 - -
Blo03g00836 278 CDD DUF296 94 177 IPR005175 -
Blo03g00836 278 PIRSF ESCAROLA 9 278 IPR014476 GO:0003680
Blo03g00836 278 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 207 IPR005175 -
Blo03g00836 278 ProSiteProfiles PPC domain profile profile. 90 227 IPR005175 -
Blo03g00836 278 SUPERFAMILY AF0104/ALDC/Ptd012-like 90 222 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g00836 Blo19g00177 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00265 Blo-Chr2:2557818 Blo03g00836 Blo-Chr3:34084725 2.00E-107 dispersed
Blo03g00836 Blo-Chr3:34084725 Blo16g00638 Blo-Chr16:25541665 3.52E-112 dispersed
Blo19g00177 Blo-Chr19:7583163 Blo03g00836 Blo-Chr3:34084725 1.86E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00836 - - jre:108994023 390.963