Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00838 ATGGATCTGCGTGAAGTTCCGCCTCCGCCACCTTCTGCAGCATCAAATATGATGGTTGGAGTTGGACCTAACCCGTACCCGACTTCCATGTCTAACTCGAATAATGCTATGATGGGCCATAATTCGACTGCAGCTCACATGATGTCGCCCGCTTCTCGGTTTCCGTTCAACTCTGTGATCAGTCCTGTGTCGAAGCCTTTAGATTCGCAAAATCCTAGTCTTTTTGATGGATCGCCGCCGGGATTGCGTACCGGTGGGTTTAACATTGAAACGGAGAAGAAAAAGAGAGGACGACCTAGGAAGTACTCGCCGGATGGTAACATTGCTTTGGGATTATCGCCCACTCCAGTGGGTCAGGGGAATTCGAGTGGCACTCCATTTTCAGAGCCACCGGCGAAGAAGAACAGAGGCAGGCCGCCCGGCTCCGGAAAGAAGCAAATGGACGCTTTGGGTAGGACGGGTGGAGTTGGTTTTACTCCCCATGTTATCCTGGTGAATCCTGGAGAGGATATAGCATCCAAAATCATGGCCTTTTCCGAGCAAGGTCCAAGAGCCATATGTGTTCTTTCCGCATACGGTGCAGTCTGCAATGTCACACTTTGTCAACCAGCTTCTTCTGGCGGCACTATGAGCTACGAGCTAATTGCATGGTTACAGGGATTAATTTTATTTCTTCTCGATTGTTTGTATATGCAGAGAACGATATTCGGGAAATATGAACTTATTTCTCTATCTGGTTCCTACTTGTTTGCTGAAAATCATGGTAGTCGGAGGCGGTCCGGTGGTCTGAGTGTGATCCTGGCCGGAGCAGATGGCCGAGTTCTTGGTGGTGGAGTTACCGGAATATTACTGGCTGCAACTCAAGTACAGGTTATTGTGGGGAGTTTTATCGTGGACGAGAAAAAAATGAACTCGAATATCCTCAAGTCTAGCTCGTCTTCCGCACCGCCCCAAATGCTAAACTTCGGTATGCAAGGGACGGCTGCCAGCCCGTCCTCGCAAATGGCCTCCAGTGATTCATCTGACGAAAATCGGAGCAGCCCTCTCAACCGCCCCCCAGTCATTTACAACAACACCGCCCAACCGAACCAAAATAACCTGCAGATGTATCGATTATGGGCCGACCAAACGCAACATTGA 1140 49.65 MDLREVPPPPPSAASNMMVGVGPNPYPTSMSNSNNAMMGHNSTAAHMMSPASRFPFNSVISPVSKPLDSQNPSLFDGSPPGLRTGGFNIETEKKKRGRPRKYSPDGNIALGLSPTPVGQGNSSGTPFSEPPAKKNRGRPPGSGKKQMDALGRTGGVGFTPHVILVNPGEDIASKIMAFSEQGPRAICVLSAYGAVCNVTLCQPASSGGTMSYELIAWLQGLILFLLDCLYMQRTIFGKYELISLSGSYLFAENHGSRRRSGGLSVILAGADGRVLGGGVTGILLAATQVQVIVGSFIVDEKKMNSNILKSSSSSAPPQMLNFGMQGTAASPSSQMASSDSSDENRSSPLNRPPVIYNNTAQPNQNNLQMYRLWADQTQH 379
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 34108482 34111914 - BLOR12019 Blo03g00838 58302
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00838 379 Gene3D - 160 311 - -
Blo03g00838 379 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 37 347 IPR039605 GO:0003680
Blo03g00838 379 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 37 347 - -
Blo03g00838 379 MobiDBLite consensus disorder prediction 114 129 - -
Blo03g00838 379 MobiDBLite consensus disorder prediction 65 148 - -
Blo03g00838 379 Pfam Plants and Prokaryotes Conserved (PCC) domain 160 296 IPR005175 -
Blo03g00838 379 ProSiteProfiles PPC domain profile profile. 154 317 IPR005175 -
Blo03g00838 379 SUPERFAMILY AF0104/ALDC/Ptd012-like 158 297 - -
Blo03g00838 379 CDD DUF296 159 296 IPR005175 -
Blo03g00838 379 SMART AT_hook_2 93 105 IPR017956 GO:0003677
Blo03g00838 379 SMART AT_hook_2 133 145 IPR017956 GO:0003677
Blo03g00838 379 MobiDBLite consensus disorder prediction 88 102 - -
Blo03g00838 379 MobiDBLite consensus disorder prediction 308 361 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Blo03g00838 Blo19g00178 BCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00838 Blo-Chr3:34108482 Blo17g00908 Blo-Chr17:29889996 7.48E-64 dispersed
Blo10g00324 Blo-Chr10:4887239 Blo03g00838 Blo-Chr3:34108482 2.58E-37 transposed
Blo19g00178 Blo-Chr19:7602466 Blo03g00838 Blo-Chr3:34108482 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00838 - - zju:107430497 382.874