Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00840 ATGGTCGAGAGGCCATTCTGCTGGGAGCTCGACGAGAAAGAGGAGAGGAGAGGGAGAACGAGCGAACGCTCGGGGGGCGACGGGGACAGACGACGACTGCCCGGAGAGAGATCGCAACGTAGAACGTATCGACGGACGTCGGTGAGCGACGAACGAGCAACGGCGTCTGCGATCTCAGAGGGAATTGACAGAGGCGAAGGGAAGGCAGTGGCGTTTTGGAAGAATGGGTGTGGGGACTTGTTGGAGAAGTTGTCCTCGTTCTCAGCTCTTCTTGGACTTTCTTCAGATTTAGGTACTGTATGTAGAGGAATGCTTGAACTAGGAGTAGTAAAAGATAAAGAACAAACAATAGCAAGCGGAGATGATGGATTTGGCGTGGAAATAAAGTACTTCATTTACTTTCACAAGACATGGAGCTTGCTAGCTTCTGGTCAAAATGCTTTCAGTACCGGATCTTTTCAATCCAAGAATTGCTTGACTGGAGATGCCTTGTTCTTGGATATTTTCTTCTGGTTTCCTTTGTTAATTGCACTTAGGGGTTGTTTCGTGCTCATTAATCAGCACAAAAGGTGTAATGCAAGTTTTTATTTAGATTTGGGCTGGATCCTATCTGCAGTTGTTCAAAGCATTGCTGATACAACGTCCTGCCTTAACTTTTTCAAAACATCTTCCAAGTTAGCAGGAAACTTTGTAGTTCATAAAATATCCGAGGTTAACTGTGAGTTACTTTCTTCACGGAAAGCATTCTTCTTGAGCTACACCATTTCAGTTGGTGTTGGGCTCCTATTGTCTCGATATGTTCTGTGGTACAATCTAATAAAGGAAGTAGGTGATGGAACTTTTGGGAGTGTTTGGCGAGCTATTAATAAGCAGACTGGTGAAGTTGTTGCAATCAAGAAAATGAAGAAAAAATATTATTCATGGAAAGAATGTGTAAATCTTAGAGAAGTGAAGTCTTTGCGGCAGATGAGCCATCCTAATATTGTGAAGCTTAAGGAAGTAATCATGGAGCATGACGTATTGTATTTTGTGTTTGAGTATATGGAATGCAATCTGTACCAACTCATGAAGGATAGGAATAAACTTTTCTCTGAAGCTGAAATCCGAAATTGGTGTTTCCAAGTATTTCAAGGTCTTGCCTACATGCATCAATGTGGATATTTCCATCGTGATTTGAAACCAGAGAATCTGTTGGTTGCAAAAGAGGAAATCAAAATTGCTGATTTCGGCCTTGCAAGGGAAATTGCATCCCAACCACCCTTTACAGAGTATGTTTCAACGCGATGGTATCGAGCACCTGAAGTACTTCTTCAATCTAACCTATATGGTGTTAAAGTTGACTTATGGGCAATGGGTGCTATCATGGCTGAGTTGTTTACTCTCCGTCCTTTATTTCCAGGTGTGAGTGAAGCAGATGAAATTTGCAAAATATGCAGTATTATTGGTAGCCCAACATTGGAATCATGGGCAGATGGGCTTTACCTTGCAAAAGATATTAATTACCAATTCCCACAAGTTGCAGGTGCTCCCCTCTCTCTCGTGATTCCATCAGCTAGTCCTGATGCAATCAACCTTATTACATCACTCTGTTCTTGGGATCCTTCTAAAAGGCCTTCAGCAGTTGAGGCCCTCCGGCATCCTTTCTTCCATGGTTGCTATTATGTTCCGCCATCCCTTCGGCCTAGGGCAGTCGGCACCAGAACTCCTCCTGGAGAGCACACAAGGGATTTGAGAGAGAACAAAGTTGGTCTGATTAAAGAAGAATTGCAGAAGGAATTGTATCCCATGCGAGTTCATGCAGCAGGACCAAAGGAACAACAAAGCTCTTGGCGATACTCTGGCTCTGTACCTCACTCTAAGATCTCAAGCAATTTCTCTTCTCGGAAGTCTTATGCTCCTGTGAACTTAGGTGTCCAGCGGAAGCTGAACATGTTGAATGAGGATCCAACTAGTAATGATAAATTTGTGAAGAGCTATGCCGGACAACCAAAATATCGACCTCCAGGAAAAGACAGCCCTAATTCCACTTATAAGGAAAGGAACAGCAATAATACACATGGTGTTTCAGATGTGGCAGAAAAGTTTGGAAAACTGACGATGGGAAATCGCAGGCAATTGCCCCGTCCCCCAGCCATGAAGGCTGGTGTGAAGTGGGTTGGTGAATCTAGAGACTTGTATATGAGGCCTCCCCAAGAGATTCAACCCATCAAACCTTTTGCCAGAAAAGTGGTGGGATGA 2238 43.7 MVERPFCWELDEKEERRGRTSERSGGDGDRRRLPGERSQRRTYRRTSVSDERATASAISEGIDRGEGKAVAFWKNGCGDLLEKLSSFSALLGLSSDLGTVCRGMLELGVVKDKEQTIASGDDGFGVEIKYFIYFHKTWSLLASGQNAFSTGSFQSKNCLTGDALFLDIFFWFPLLIALRGCFVLINQHKRCNASFYLDLGWILSAVVQSIADTTSCLNFFKTSSKLAGNFVVHKISEVNCELLSSRKAFFLSYTISVGVGLLLSRYVLWYNLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWKECVNLREVKSLRQMSHPNIVKLKEVIMEHDVLYFVFEYMECNLYQLMKDRNKLFSEAEIRNWCFQVFQGLAYMHQCGYFHRDLKPENLLVAKEEIKIADFGLAREIASQPPFTEYVSTRWYRAPEVLLQSNLYGVKVDLWAMGAIMAELFTLRPLFPGVSEADEICKICSIIGSPTLESWADGLYLAKDINYQFPQVAGAPLSLVIPSASPDAINLITSLCSWDPSKRPSAVEALRHPFFHGCYYVPPSLRPRAVGTRTPPGEHTRDLRENKVGLIKEELQKELYPMRVHAAGPKEQQSSWRYSGSVPHSKISSNFSSRKSYAPVNLGVQRKLNMLNEDPTSNDKFVKSYAGQPKYRPPGKDSPNSTYKERNSNNTHGVSDVAEKFGKLTMGNRRQLPRPPAMKAGVKWVGESRDLYMRPPQEIQPIKPFARKVVG 745
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 34120859 34135932 - BLOR12021 Blo03g00840 58304

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00840 745 ProSiteProfiles Protein kinase domain profile. 270 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g00840 745 SUPERFAMILY Protein kinase-like (PK-like) 269 554 IPR011009 -
Blo03g00840 745 MobiDBLite consensus disorder prediction 13 57 - -
Blo03g00840 745 MobiDBLite consensus disorder prediction 606 625 - -
Blo03g00840 745 Gene3D Transferase(Phosphotransferase) domain 1 349 554 - -
Blo03g00840 745 SMART serkin_6 270 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g00840 745 Pfam Protein kinase domain 270 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g00840 745 MobiDBLite consensus disorder prediction 13 48 - -
Blo03g00840 745 CDD STKc_MAK_like 270 549 - -
Blo03g00840 745 MobiDBLite consensus disorder prediction 644 688 - -
Blo03g00840 745 MobiDBLite consensus disorder prediction 602 625 - -
Blo03g00840 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 387 399 IPR008271 GO:0004672|GO:0006468
Blo03g00840 745 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 269 677 - -
Blo03g00840 745 Gene3D Phosphorylase Kinase; domain 1 268 348 - -
Blo03g00840 745 ProSitePatterns Protein kinases ATP-binding region signature. 276 300 IPR017441 GO:0005524
Blo03g00840 745 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 269 677 - -
Blo03g00840 745 MobiDBLite consensus disorder prediction 674 688 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00840 K08829 MAK; male germ cell-associated kinase [EC:2.7.11.22] - jre:109014249 633.254
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00840 Blo-Chr3:34120859 Blo13g00180 Blo-Chr13:6894448 1.75E-65 dispersed
Blo03g00840 Blo-Chr3:34120859 Blo18g00803 Blo-Chr18:23452152 1.31E-57 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g880 . . . . . . Bma07g00966 Bma14g00111 Cmo06g00611 Cmo16g00575 . . . . . Cpe14g00445 . . . . . . . . Cla10g00110 Cam10g0105 Cec10g0114 Cco10g0115 Clacu10g0111 Cmu10g0958 Cre10g0368 . . . . Lsi07g01139 . . Cme06g02415 Blo03g00840 . Bda07g00139 . Bpe08g01075 . . . . . . Cma06g00604 Cma16g00526 Car06g00539 Car16g01140 . . . . . . . . . . . . . . . . . Csa03g00109 Chy06g02196 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005380 1 2 1 3 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 1 2 40
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84192 PF00069 Pkinase 1.30E-74 CL0016 Blo PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo03g00840 Blo_Chr03 FPKM 8.716187 8.472183 10.389348 12.299887 23.168621 21.647724 23.608624 17.314117 15.934009 15.323741