Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00841 ATGAAGCATAAAGATGGCAAACCAGGGCCTCATTCGGAGAGAACTGCCAAAGTCGTTCCCATGGCTATTCTGATTGTCGTGTTATGTGGGCTTTCATTTTATCTTGGTGGGATCTTTTGTTCTGAGAATGAAAGATACAATAACAAAAAAGCCATTGAAGATCTTCCAAAATCGGCCAAATCTTCCAAGGAATTGTCGATTTCTCCCCTCCAAGTTAAATCCACGGCCTTTCTCGAATGTAGCGGTGACTACCAAGATTATACTCCTTGCACCGATCCGAAGAGATGGAAAAAATACGGCACCCATCGGCTTACATTCATGGAGCGCCATTGCCCGCCTGCATTCGAGAGGAAAGAATGCCTGATTCCACCCCCGAATGGATATAAACCCCCCATCAGATGGCCAAAGAGCCGAGACGAATGTTGGTATAGGAATGTGCCGTATGATTGGATCAATACGCAAAAGTCTAATCAAAATTGGCTTAGGAAAGAAGGCGAAAAGTTCCAGTTTCCCGGCGGTGGCACGATGTTTCCGAATGGCGTTGGGGAGTATGTCGATTTTATGCAAGATCTCATACCGGGTATGAGAGACGGAAGTGTCCGTACTGCCATCGATACTGGCTGCGGGGTTGCAAGTTGGGGAGGCGATCTGCTGGATCGAGGAATTTTGACAGTTTCTCTCGCGCCAAGAGACAACCACGAAGCTCAAGTCCAGTTTGCTTTGGAGCGAGGTATTCCGGCGATCCTCGGCATTATTTCAACGCAAAGACTTCCTTTTCCGTCGAGCGCATTCGATATGGCTCATTGCTCGAGATGCCTTATCCCATGGACTGAATTTGGAGGCATATACTTACTAGAGATCGGCCGGATTCTTCGACCGGGAGGCTTTTGGGTCTTGTCAGGCCCACCCATCAACTACGAACGTCACTGGCGAGGTTGGAACACGACGGTGGAAGAACAGAAAGGAGACTACGAAAAGTTACAAAAACTACTAACCTCGATGTGCTTCAAATTATACGACAAAAAAGACGATATAGCGGTTTGGCAGAAAACGACCGACAACAGTTGCTACGAAAAGCTAGCCGTACCCGACTCCTACCCGCCAAAATGCGACGACAGCGTCGAACCCGATTCCGCATGGTACACTCCGTTGCGAGGCTGTGTGGTGGTTCCAAATTCGAATCTGAAGAAATCGAGCTTGACCGCCTTACCCAAATGGCCTGCTCGGCTCCATATTGCACCTGAACGGATCGGAAATCTTCACGGTGGGAGTATTAGTTCTTTTAAGCATGACGATAGTAAGTGGAAGGTTCGAGTCAAGCACTACAAAAAGTTGCTCCCTGCCATTGGGACCGATAAGATAAGAAATGTTATGGACATGAATACTGTTTATGGAGGTTTTGCTGCCTCCATTATCGACGATCCTTTGTGGGTGATGAACGTCGTTTCTTCCTACGCCGCCAATACACTGGCTGTCGTCTATGATCGGGGTCTGATCGGAACTTATCATGACTGGTGCGAGGCTTTTTCGACGTATCCTCGAACCTATGATCTCCTCCACCTTGACGGCCTCTTCACGGCGGAAAACCACAGATGCGAGATGAAGTACGTGCTGTTGGAGATGGACCGGATCCTTCGTCCTAGCGGGTACGTAATAATTCGGGAATCAAGCTATTATGTGGACGCCATAGCCACCATTGGCAAGGGAATGCGATGGGGGTGTCGGAAAGAACAAACTGAATACGAAATCGAAAGCGAGAAGATTCTCATCTGCCAGAAAAAACTCTGGTACTCGTCCAGTCCCAGCGCCAGATGA 1815 48.37 MKHKDGKPGPHSERTAKVVPMAILIVVLCGLSFYLGGIFCSENERYNNKKAIEDLPKSAKSSKELSISPLQVKSTAFLECSGDYQDYTPCTDPKRWKKYGTHRLTFMERHCPPAFERKECLIPPPNGYKPPIRWPKSRDECWYRNVPYDWINTQKSNQNWLRKEGEKFQFPGGGTMFPNGVGEYVDFMQDLIPGMRDGSVRTAIDTGCGVASWGGDLLDRGILTVSLAPRDNHEAQVQFALERGIPAILGIISTQRLPFPSSAFDMAHCSRCLIPWTEFGGIYLLEIGRILRPGGFWVLSGPPINYERHWRGWNTTVEEQKGDYEKLQKLLTSMCFKLYDKKDDIAVWQKTTDNSCYEKLAVPDSYPPKCDDSVEPDSAWYTPLRGCVVVPNSNLKKSSLTALPKWPARLHIAPERIGNLHGGSISSFKHDDSKWKVRVKHYKKLLPAIGTDKIRNVMDMNTVYGGFAASIIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDWCEAFSTYPRTYDLLHLDGLFTAENHRCEMKYVLLEMDRILRPSGYVIIRESSYYVDAIATIGKGMRWGCRKEQTEYEIESEKILICQKKLWYSSSPSAR 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 34150508 34153551 - BLOR12022 Blo03g00841 58305

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00841 604 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 599 - -
Blo03g00841 604 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 438 559 IPR029063 -
Blo03g00841 604 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 331 IPR029063 -
Blo03g00841 604 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 86 593 IPR004159 GO:0008168
Blo03g00841 604 Gene3D Vaccinia Virus protein VP39 176 357 IPR029063 -
Blo03g00841 604 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 1 599 IPR004159 GO:0008168
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00841 - - - pop:112327021 1086.63
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00841 Blo-Chr3:34150508 Blo19g00148 Blo-Chr19:5176248 0 dispersed
Blo18g00616 Blo-Chr18:10039479 Blo03g00841 Blo-Chr3:34150508 1.24E-07 dispersed
Blo03g00841 Blo-Chr3:34150508 Blo19g00119 Blo-Chr19:3402907 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g882 . . . . . Bpe07g00056 Bma07g00965 Bma14g00112 . . . . . . . . Cpe02g00603 . . . . . . . . . . . . . . Cone8ag0527 Cone12ag0529 . . . . . . Blo03g00841 . Bda07g00138 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003245 2 3 2 3 2 1 3 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 0 1 6 4 1 50
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo03g00841 Blo_Chr03 FPKM 6.603448 7.897712 11.704872 12.356701 15.021637 15.138767 16.435186 0.0 0.0 0.0