Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00861 ATGACGGATTATGGATTATCGACGACGGCGATGAATCTTTGGACGGACGAGAATGCGTCGGTGATGGACGCCTTCTTGAATTCTGATCTTTCTTCTTTCTGGGCTCAGCCTCCTCAGAACCACCCTTCCTCCGCCTCTACATCTGCTCCTCTCTCCCAATCCCAGCCGTCTGCGGTGGCTTTCTCCCAGGAGAGTCTGCAGCAACGTCTGCAGGCGGTGATCGACGGAGCTCGCGAGAGGTGGACGTACGCGATATTCTGGCAGTCCTCTTACGATTACTCCGGCCCGTCGATTTTAGGGTGGGGTGATGGGTATTACAAAGGGGATGAAGGAAAAGGAGCGACCAGAGCCAATACTCCCACTTCTGCTGCGGAGCAGGAGCACCGGAGAAAAATTCTTCGGGAGCTCAACTCACTAATTTCAGGCTCGGCCGCCGCTTCAGACGACCCCGTCGATGAAGTCGTCACCGACACCGAGTGGTTCTTCTTGGTTTCGATGACCCAAACTTTCGTCAACGGGAGTGGATTGCCCGGTCAGGCTTTGTTCAGTTCCCGACCGGTGTGGGTTTCCGGGCCTGATCGACTAGCGACGTCTACCTGCGAACGGGCTCGGCAGGCTCAGGCCTTCGGGTTGCAGACGATAGTATGTATACCCTCTCCCAACGGAGTGGTTGAATTGGGCTCGACGGAGGTCATTTTGCAGAGCGCCGATCTGACGAATAAAGTAACTGTTTTGTTCAATTTCAATAATCTGGAGGCTGGTTCGTGGCCCTTAGACAGTGCTGACCAAGCTCAAACAGACCCATCTTCTCTCTGGCTGAACGATCCATCTGAAATTAAGGAACCGGCTAGCTCAATCCCATTCCCATCTTCCATGGCTCCAGCTTCAACTACTCAGGAAGCTTCAAAGCCAATCAACATCGAAAATCGAAGGTCATTGGAGAATCCGTCCAATCCACAATCGCCTCGGATGCAGATGCAGACGTTCTTCGGTGTAGGATTGAATTTTTCCAGTTACGGATGCAAGCCGGAATCCGGCGATATTCTCAACTTTGGTGAAAGTAAAAGGAGTTCTTGTGATAACGGCAGCTTGTTCTCCGGCCATTCTCAGATCATTCCTGAGGAGCCCGTGAAAAAGAAGAGATCGCCTGGTTCTAGAGGAAGTAACGAAGATGGGATGCTGTCGTTTACTTCCGGCATGATTTTGCCATCTTCAGGCGTGAAATCAAGTGGATGCGGAGTTGATTCAGATCATTCCGATCTCGAAGCTTCAGTGGTTCGTAAGGCAGATAGTAGCAGAGTAGTAGAACCAGAGAAGAAGCCTCGAAAAAGAGGAAGAAAACCAGCAAACGGAAGAGAAGAGCCATTAAATCACGTCGAAGCAGAACGACAGAGAAGAGAGAAGCTAAACCAGAGGTTCTACGCTCTCAGAGCTGTAGTTCCAAACGTGTCGAAAATGGACAAAGCTTCCCTTCTCGGCGACGCCATTTCTTACATCAACGAGCTCAAATCCAAGCTTCAAACTTCAGAATCAGAAAACGAAGAATTGCAGGTACAGTTAGATTCAGCGAAAAAGGATTTGGCCAACAAAGAAAATCGCTATACAAGATCGAAACAAGACCAAGAACAGAAGATATCAAATCAAAATGGAGGTAAACTTTCTGAGATGGACATTGATGTAAAAATACTGGGTTGGGACGCCATGATCCGAATTCAATGCAGTAAGAAAAACCATCCAGCTGCTACGTTAATGGCGGCTCTAAAGGAATTACACTTGGAAGTTCACCATGCGAGCATGTCAGTGATGAATAACTTGATGATCCAACAAGCGACAGTGAAGATGGGGAGTAGATTTTACACTCAAGAACAGCTCAAAAATGCTCTGTCGTCAAAATTAAGCGATACCCGATGA 1911 48.72 MTDYGLSTTAMNLWTDENASVMDAFLNSDLSSFWAQPPQNHPSSASTSAPLSQSQPSAVAFSQESLQQRLQAVIDGARERWTYAIFWQSSYDYSGPSILGWGDGYYKGDEGKGATRANTPTSAAEQEHRRKILRELNSLISGSAAASDDPVDEVVTDTEWFFLVSMTQTFVNGSGLPGQALFSSRPVWVSGPDRLATSTCERARQAQAFGLQTIVCIPSPNGVVELGSTEVILQSADLTNKVTVLFNFNNLEAGSWPLDSADQAQTDPSSLWLNDPSEIKEPASSIPFPSSMAPASTTQEASKPINIENRRSLENPSNPQSPRMQMQTFFGVGLNFSSYGCKPESGDILNFGESKRSSCDNGSLFSGHSQIIPEEPVKKKRSPGSRGSNEDGMLSFTSGMILPSSGVKSSGCGVDSDHSDLEASVVRKADSSRVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQTSESENEELQVQLDSAKKDLANKENRYTRSKQDQEQKISNQNGGKLSEMDIDVKILGWDAMIRIQCSKKNHPAATLMAALKELHLEVHHASMSVMNNLMIQQATVKMGSRFYTQEQLKNALSSKLSDTR 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 34437532 34439442 + BLOR12042 Blo03g00861 58325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00861 636 MobiDBLite consensus disorder prediction 259 323 - -
Blo03g00861 636 CDD bHLH_AtAIB_like 450 525 - -
Blo03g00861 636 MobiDBLite consensus disorder prediction 525 550 - -
Blo03g00861 636 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 66 246 IPR025610 -
Blo03g00861 636 SMART finulus 459 508 IPR011598 GO:0046983
Blo03g00861 636 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 456 521 IPR036638 GO:0046983
Blo03g00861 636 MobiDBLite consensus disorder prediction 36 60 - -
Blo03g00861 636 MobiDBLite consensus disorder prediction 259 273 - -
Blo03g00861 636 Pfam Helix-loop-helix DNA-binding domain 457 502 IPR011598 GO:0046983
Blo03g00861 636 Gene3D - 445 535 IPR036638 GO:0046983
Blo03g00861 636 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 453 502 IPR011598 GO:0046983
Blo03g00861 636 PANTHER TRANSCRIPTION FACTOR MYC2 43 633 - -
Blo03g00861 636 MobiDBLite consensus disorder prediction 357 463 - -
Blo03g00861 636 MobiDBLite consensus disorder prediction 420 463 - -
Blo03g00861 636 Coils Coil 499 544 - -
Blo03g00861 636 MobiDBLite consensus disorder prediction 388 412 - -
Blo03g00861 636 MobiDBLite consensus disorder prediction 289 323 - -
Blo03g00861 636 PANTHER MYC 43 633 IPR045084 GO:0003700|GO:0006355
Blo03g00861 636 MobiDBLite consensus disorder prediction 525 540 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00993 Blo-Chr2:38538853 Blo03g00861 Blo-Chr3:34437532 0 dispersed
Blo03g00803 Blo-Chr3:33254700 Blo03g00861 Blo-Chr3:34437532 3.74E-19 dispersed
Blo03g00861 Blo-Chr3:34437532 Blo19g00189 Blo-Chr19:8412187 0 dispersed
Blo03g00858 Blo-Chr3:34406074 Blo03g00861 Blo-Chr3:34437532 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12133 PF14215 bHLH-MYC_N 1.30E-53 CL0161 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00861 K13422 - vvi:100250607 807.749