Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00879 ATGGAACTTTTTCCTGCTCAACCAGATTTGTCTCTGCAAATCAGCCCTCCAAACTCCAATCACTCGTCAGGTTGGAGAAGAAGAAGAGAAGAAGAGGTGGATTTGGGTTTCTGGAAAATAGCTTTAGATTCAAGAACCTCCATCTCATCAATGGCGAAAAGTGACAATTATTTTGATCTTTCTCTCTCTAATCCACGTCTCACTGAACCTAACCCAAACAATTTTCATCACCTTCAAAGTGTTAACGGCAATCTCTTGCAGACCTTCCAACCAAACCAGTTGCCTCACCTCCATAATCTCCATCAACAGAAGATTTTACATCATCATCAACCACTTCTCAATAACCACCAGCATCAGCGTGAGCTTGGTCCTGAGCTTGGATTCTTGAGACCCATTAGAGGGATTCCAGTTTATCAGAATCCTCCTCCTTTTTCATTTGCTCAACACCGTAATTTAGACTCCACTTCTTTGTCTTCCTCCATTGTTAACAGTAGTTCAACTTCTTCAAGCTCGTATCAGGCACAAGGTCTTATGCGATCGAGATTCTTATCAAGATTTCCAGCCAAACGTTCAATGAGAGCGCCGAGGATGCGGTGGACTACCACTCTACATGCTCATTTTGTTCATGCTGTTGAGCTCTTAGGCGGCCATGAAAGGGCTACACCAAAGTCAGTTCTTGAGCTTATGGATGTGAAAGATCTCACCTTGGCCCATGTTAAATCCCATTTACAGATGTATAGAACCGTGAAGACCACTGACAGAGCTGCAGGTTCTTCAGATTTGTACGAGAACGGGTCTTCTGGGGATAATACGGAAGAGTTAATGGTTGATGTTCATAATCCAAGAAGAGGGCCTGAGCTTTCTATTCAGAAGGGAAGGCAAAATGCTCATCAAGACAAGGATTACGGCGGACTTTGGTGCAATTCTTCAAGCAGGGAAGCTTGGTTGCATGGAAAACCAAATGATTCCTGCCGAAACTTATCATCCATGGAGAAAGAATTGGATCCAAAGAGCTTAAGCTATGAGAGAATATCCGATATAAGCTCATCAACAAATCTTTCGGGGACTGAAGAGGGTTTTAGAGGGAGAATCTGGTGCTACCCAGATGAGAAAACTGGAGGAAAAAGAAAGGGAAAAGAAAAGAAAGGGAAAAGAAAAGAAAAGAAAGGAAAGGAAAAAGAAAAGAAAGGAAAAGGAAAAAGAAAAAGGAAAGAGCCAAAGAAGAAGACAAGAAAGACAGAGGGGAAACAAAAGAAGAAGAGCTGTGGGGGTATAAAACTAAAGCATGTCCTTTTCCCTATCAAGTTGTGA 1311 42.18 MELFPAQPDLSLQISPPNSNHSSGWRRRREEEVDLGFWKIALDSRTSISSMAKSDNYFDLSLSNPRLTEPNPNNFHHLQSVNGNLLQTFQPNQLPHLHNLHQQKILHHHQPLLNNHQHQRELGPELGFLRPIRGIPVYQNPPPFSFAQHRNLDSTSLSSSIVNSSSTSSSSYQAQGLMRSRFLSRFPAKRSMRAPRMRWTTTLHAHFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAGSSDLYENGSSGDNTEELMVDVHNPRRGPELSIQKGRQNAHQDKDYGGLWCNSSSREAWLHGKPNDSCRNLSSMEKELDPKSLSYERISDISSSTNLSGTEEGFRGRIWCYPDEKTGGKRKGKEKKGKRKEKKGKEKEKKGKGKRKRKEPKKKTRKTEGKQKKKSCGGIKLKHVLFPIKL 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 34644808 34649160 + BLOR12060 Blo03g00879 58343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00879 436 MobiDBLite consensus disorder prediction 377 416 - -
Blo03g00879 436 SUPERFAMILY Homeodomain-like 192 248 IPR009057 -
Blo03g00879 436 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 351 IPR044847 GO:0000976|GO:0006355|GO:0010158
Blo03g00879 436 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 195 248 IPR006447 GO:0003677
Blo03g00879 436 MobiDBLite consensus disorder prediction 1 27 - -
Blo03g00879 436 Gene3D - 194 251 - -
Blo03g00879 436 MobiDBLite consensus disorder prediction 371 424 - -
Blo03g00879 436 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 351 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00879 Blo-Chr3:34644808 Blo19g00245 Blo-Chr19:12987645 0 dispersed
Blo03g00879 Blo-Chr3:34644808 Blo18g00480 Blo-Chr18:5818249 1.81E-50 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12137 None None None None Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00879 - - qsu:112010545 474.167