Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00893 ATGGAAACCCAGAAAACTGGAGATTTTCCCGATTGGTACTCTCCTGAAACGGGGATTTATCAGAGCATATTTCCCCCTGTAAATCTTCCAACCGACCCGTGTCTCGACGTCGTCTCGTTCATCTTCTCCAATCAACTTAATGGGCAGGTGGCTCTCATTGATTCTTCTTCTGGGTATCGTCTCTCTTACTCAGACCTCTATTCTTTGGTCAAATCCATGGCCGCTGGGCTTCACAATGCGGGCGTTTCTCAAGGTGACGTCGTTCTGATTCTACTTCCTAATTCCATTTTCTATCCAATCATTCTTATGGGCGTTTTGTATTTGGGCGCGATTGTTACCACCATGAATCCTCGAAGCAGTATTTCAGAAATTAAGAAACAATGCGCCGAATGCAATGTTTGCTTCGCTTTTACTGAAAGCGAGAGCGTTGAGAAATTACAGGCGTTGGGATTTCCTGTTGTTGGGGTTCCAGAAAATGTTGATTTAGATTCGAAGCCTGTAGGATTCTCATCTTTTTATCAGTTTATTTCTTGTAGTCTGGATTCGACGAAGAGGCCAGTGATTAATCAGCAAGATACAGCCGCCATTTTGTTTTCATCAGGAACAACAGGAGCGAGCAAGGGGGTTGTGCTTACTCATAGGAATTTCATCGCCATGGTTGAGCTCTTCGTCCGATTCGAAGCTTCCCTGTACAACTATTCGAGCTGGAACAACGTTGTTTTAGCCATTTTGCCTATGTTTCACATATACGGGCTCTGCCATTTTTGTCTGGGATTATTCTCCTTGGGTTGTTGCATAGTTGTAATGAAAAGGTTTGACTCTAATGAGATGGTCAAGGCCATTGAAAGAGAGAGAGTCACCCACCTAACAGTCGTTCCACCCATTTTGAGATCATTGACGAACGCTGCAAAGCAATTTAATGGAAGTTTGCAGAGTTTGAAGCAGGTTTGCTGTGGGGCAGCTCCTGTGAGCAAAACAGAAATAGATAAATTTGTTCGTCTTCTTCCTCACGTCGATTTCATTCAGGGCTATGGTATGACTGAGTCTACAGCAGTAGCAACTCGTGGGTTCAACACAAAGAAGTTTAAGAATTATTCTTCAGCAGGTCTTCTGGCCCCAAGCATGGAAGCTAAGGTTGTGGATTGGAAAAGTGGTTCTTCCTTGCCTCCTGGAGATTGTGGGGAGCTTTGTTTGCGCGGACCGTCCGTGATGAAAGGATATTTAAACAATGCCGAGACAACATTATTGACGATAGACCATGACGGTTGGCTGCACACTGGAGATATCGTTTACTTTGACCATGATGGCTACTTGTATATTGTCGATCGAGCGAAAGAGATGATTAAATACAAAGGATTTCAGATTGCTCCAGCTGATTTAGAAGCTATCTTGATTTCACATCCTAAGATTTTGGATGCAGCTGTTACAGCTCAGAAGGACGAGGAATGTGGGGAAATACCAGTGGCGTTCGTGGTCGTGAAACCGACCGGGGCGGGGCTTTCTCATCAAGATGTTATGAGCTATGTTGCTAAACAGGTTGCGCCATACAAGAAAGTTAGGAAGGTGGTATTTGCAAAATCAATCCCTAAGTCTCCTGCTGGGAAGATTCTCAGAAGAGAACTTAAAAATCAAATGTCTTCAAAGCTCTGA 1650 43.94 METQKTGDFPDWYSPETGIYQSIFPPVNLPTDPCLDVVSFIFSNQLNGQVALIDSSSGYRLSYSDLYSLVKSMAAGLHNAGVSQGDVVLILLPNSIFYPIILMGVLYLGAIVTTMNPRSSISEIKKQCAECNVCFAFTESESVEKLQALGFPVVGVPENVDLDSKPVGFSSFYQFISCSLDSTKRPVINQQDTAAILFSSGTTGASKGVVLTHRNFIAMVELFVRFEASLYNYSSWNNVVLAILPMFHIYGLCHFCLGLFSLGCCIVVMKRFDSNEMVKAIERERVTHLTVVPPILRSLTNAAKQFNGSLQSLKQVCCGAAPVSKTEIDKFVRLLPHVDFIQGYGMTESTAVATRGFNTKKFKNYSSAGLLAPSMEAKVVDWKSGSSLPPGDCGELCLRGPSVMKGYLNNAETTLLTIDHDGWLHTGDIVYFDHDGYLYIVDRAKEMIKYKGFQIAPADLEAILISHPKILDAAVTAQKDEECGEIPVAFVVVKPTGAGLSHQDVMSYVAKQVAPYKKVRKVVFAKSIPKSPAGKILRRELKNQMSSKL 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 34855723 34858536 - BLOR12074 Blo03g00893 58357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00893 549 SUPERFAMILY Acetyl-CoA synthetase-like 45 546 - -
Blo03g00893 549 Pfam AMP-binding enzyme C-terminal domain 460 535 IPR025110 -
Blo03g00893 549 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 548 - -
Blo03g00893 549 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 9 548 - -
Blo03g00893 549 Gene3D - 18 445 IPR042099 -
Blo03g00893 549 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Blo03g00893 549 Gene3D - 446 548 IPR045851 -
Blo03g00893 549 CDD 4CL 29 541 - -
Blo03g00893 549 Pfam AMP-binding enzyme 47 450 IPR000873 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00893 Blo-Chr3:34855723 Blo17g00714 Blo-Chr17:20865662 1.05E-160 dispersed
Blo03g00893 Blo-Chr3:34855723 Blo03g01079 Blo-Chr3:37191931 3.24E-144 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00893 K01904 - zju:107434556 739.954