Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00901 ATGGGCAACAGCGAGATGGATAAAACAACTAAAGAGGAGTTGAAGACAACGCCTGCTTCCACGCAGGAGCAATCCCCAACTACGAGCAGTGGTACAGTTAATCCTGACTGGTCAGGATTTCAGGCTTATTCTCCTATGCCTCCTCATGGGTTCTTGGCATCGAGTCCTCAAGCTCATCCATATATGTGGGGTGTTCAGCATATAATGCCTCCTTATGGCACTCCTCCCTATGTTGCTATGTATCCCCACGGTGGCATATACGCTCATCCATCCATTCCTCCGGGTCCATATCCTTTTAGTCCTTTTGCTGCTCCTTCTCCAAATGGCATCACTGAAGCTTCTGTAAATACAACGGGTGGATTTGACACAGATGTCAAACACTCGGACGCAAAGGAAAAATTACCCATTAAAAGATCGAAAGGAAGCCTGGGCAGTTTGAATATGATTACTGGGAAGAATAATGAGCTTGGTAAAATGTCAGGAGCATCTGCTAATGGAATATACTCTAAAAGTGCTGATAGTGCAAGTGAAGGAACGAGTGACGGAAGTGATGACAATTCTGACAATGATTCGCAATTGAAGACAAGTTGTGGACAAGACTCCTCAGAAGCAGCGACATTTCAAAATGGCAGCTCTGTGCATGGTGCTAAAAATGGAGGACCAAATGGAACTTCAATGGCGAATCAGTCAATGACCATCATACCGGCTGCTGGAGTACCCGGGTCTGTACCTGGTCCCACTACCATCTTAAATATAGGAATGGACTATTGGGCGGCTCCGGCTTCTTCCGCTGTCCCTCCTGCCTTGAAGGCAAATCCAGTTGCTGCTGGATCGCGCGATCAGTCTCAGCTTTGGTTGCAGGATGAGCGAGAGCAAAAACGACAGAGACGGAAACAATCAAACCGAGAATCTGCTCGTCGTTCTCGGCTGCGGAAGCAGGTGGAATGTGATGAACTGGCTCAACGGGCTGAAGTGTTGAAAGATGAAAATGCCAACCTCAGATCCGAAGTGAATCGAATCAGAAGCGAGTATGAGCAACTTCTCTCGGAGAATTCCTCGCTTAAGGAAAGATTAGTGGAAATTCCCGAAAAGGAGCCGACGAAGTCGAGCGAGGAAAAGAAACAGACTACGCAGTCGGAGCTCAGGAAAGGGGGTAAGTAA 1161 47.46 MGNSEMDKTTKEELKTTPASTQEQSPTTSSGTVNPDWSGFQAYSPMPPHGFLASSPQAHPYMWGVQHIMPPYGTPPYVAMYPHGGIYAHPSIPPGPYPFSPFAAPSPNGITEASVNTTGGFDTDVKHSDAKEKLPIKRSKGSLGSLNMITGKNNELGKMSGASANGIYSKSADSASEGTSDGSDDNSDNDSQLKTSCGQDSSEAATFQNGSSVHGAKNGGPNGTSMANQSMTIIPAAGVPGSVPGPTTILNIGMDYWAAPASSAVPPALKANPVAAGSRDQSQLWLQDEREQKRQRRKQSNRESARRSRLRKQVECDELAQRAEVLKDENANLRSEVNRIRSEYEQLLSENSSLKERLVEIPEKEPTKSSEEKKQTTQSELRKGGK 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 35019511 35024664 + BLOR12082 Blo03g00901 58365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00901 386 MobiDBLite consensus disorder prediction 268 313 - -
Blo03g00901 386 PANTHER BZIP TRANSCRIPTION FACTOR 68 1 378 - -
Blo03g00901 386 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 378 IPR044827 GO:0003700|GO:0006355|GO:0043565
Blo03g00901 386 MobiDBLite consensus disorder prediction 356 386 - -
Blo03g00901 386 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 296 311 IPR004827 GO:0003700|GO:0006355
Blo03g00901 386 SMART brlzneu 289 353 IPR004827 GO:0003700|GO:0006355
Blo03g00901 386 MobiDBLite consensus disorder prediction 124 138 - -
Blo03g00901 386 Pfam Disordered region downstream of MFMR 132 266 - -
Blo03g00901 386 SUPERFAMILY Leucine zipper domain 293 348 IPR046347 GO:0003700|GO:0006355
Blo03g00901 386 MobiDBLite consensus disorder prediction 168 229 - -
Blo03g00901 386 Pfam bZIP transcription factor 289 351 IPR004827 GO:0003700|GO:0006355
Blo03g00901 386 Pfam G-box binding protein MFMR 1 93 IPR012900 -
Blo03g00901 386 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 291 354 IPR004827 GO:0003700|GO:0006355
Blo03g00901 386 MobiDBLite consensus disorder prediction 284 298 - -
Blo03g00901 386 MobiDBLite consensus disorder prediction 1 41 - -
Blo03g00901 386 MobiDBLite consensus disorder prediction 15 39 - -
Blo03g00901 386 CDD bZIP_plant_GBF1 294 344 IPR045314 GO:0003700|GO:0006355
Blo03g00901 386 Gene3D - 291 346 - -
Blo03g00901 386 Coils Coil 309 357 - -
Blo03g00901 386 MobiDBLite consensus disorder prediction 351 386 - -
Blo03g00901 386 MobiDBLite consensus disorder prediction 124 147 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00901 Blo-Chr3:35019511 Blo05g00785 Blo-Chr5:28923433 6.55E-54 dispersed
Blo07g01347 Blo-Chr7:33618402 Blo03g00901 Blo-Chr3:35019511 4.91E-07 dispersed
Blo03g00901 Blo-Chr3:35019511 Blo06g00126 Blo-Chr6:5096307 2.52E-60 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12139 PF16596 MFMR_assoc 2.00E-49 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00901 K09060 - vvi:100243644 493.812