Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00917 ATGGCGCAAGCATCGACGGCTGGAGGATGCGGTGGTGGTGGTTTGACAGTCTGGGGAGGGGAGGTTCCAAGAGCTCACGCAGCTATGGCTTTAGTTCAGCTAATCAATGGAGGATACCACGTTATCACCAAAGTTGCTCTCAATGTCGGTATTAACCAGCTTGTTTTCTGCCTCTTTCGTGACCTTCTCGCCCTCTCCATCCTCGTCCCCGTCGCCTATGTCCGTGAGAAACGAGCTCGCCCGCCGATGACAAGACACCTCCTCTTATCATTCTTCTTTCTTGGTTTAACTGGAATATTTGGCAATCAGCTTTTGTTTCTCATTGGTCTTGGCTATACAAATCCAACTTATGCTGCTGCTATACAGCCTTCCATTCCAGTTTTCACATTTCTCTTTGCTGCTGTAATGGGAACAGAAAGAGTGAACTTTCTCAAATTGGAAGGCCAGTCCAAAATTTTGGGGACGCTCATCTGTGTGTCTGGAGCCATATTGATGGTTTTATTCCGTGGTCCAGCTTTAATTGGAAATGCAGGGATAGACTTAGCCTTCCAAAGTGAAATAACTGTGAGGGGTCAGCTAGAACTGGCTGGATGGTTGGTGTCTAGTTTTATGGCATTTGGGCTAGATCATTTTCACCTTGGAGTGCTGTGCCTAATAGGGAACTGCATGTGCATGGCTGCTTTTTTGGCCATTCAGGCATCAATTTTGAAAAAGTATCCTGCCAACCTATCAGTGACTGCATATTCATACATCTTCGGTACAGTACTGATGGTGATAACATCATTAATTATGGCCAACAAGTCAACCGACTGGAGTTTGGCACAATCGGAAGTTCTTGCCGTTCTCTATGCTGGTATTGTGGCATCTGCCTTTAACTATGGACTCATAACCTGGGGTAACAAAATCTTGGGGCCTGCATTAGTGGCTCTCTACAATCCACTTCAACCTGCCGCTACCGCTCTCCTATCCAGAATCTTCCTCGGAAGCCCGGTTTACTGTGGAAGTGTATTTGGAGGGGGTTTGATCATAGCTGGTCTTTATATGGTAACATGGGCAACACACAGAGAGCAGCAACAAGCAGCTTTGGGGATGGGGGGAGTTCATGCAACTCGGGACTCTGAGCCACTCATTAACAAGGACTGA 1143 46.89 MAQASTAGGCGGGGLTVWGGEVPRAHAAMALVQLINGGYHVITKVALNVGINQLVFCLFRDLLALSILVPVAYVREKRARPPMTRHLLLSFFFLGLTGIFGNQLLFLIGLGYTNPTYAAAIQPSIPVFTFLFAAVMGTERVNFLKLEGQSKILGTLICVSGAILMVLFRGPALIGNAGIDLAFQSEITVRGQLELAGWLVSSFMAFGLDHFHLGVLCLIGNCMCMAAFLAIQASILKKYPANLSVTAYSYIFGTVLMVITSLIMANKSTDWSLAQSEVLAVLYAGIVASAFNYGLITWGNKILGPALVALYNPLQPAATALLSRIFLGSPVYCGSVFGGGLIIAGLYMVTWATHREQQQAALGMGGVHATRDSEPLINKD 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 35175615 35179735 + BLOR12098 Blo03g00917 58381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00917 380 Pfam EamA-like transporter family 29 166 IPR000620 GO:0016020|GO:0016021
Blo03g00917 380 Pfam EamA-like transporter family 213 350 IPR000620 GO:0016020|GO:0016021
Blo03g00917 380 PANTHER WAT1-RELATED PROTEIN 22 379 IPR030184 GO:0016021|GO:0022857
Blo03g00917 380 PANTHER WAT1-RELATED PROTEIN 22 379 - -
Blo03g00917 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 355 - -
Blo03g00917 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 60 169 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00917 Blo-Chr3:35175615 Blo01g01580 Blo-Chr1:55602734 2.16E-72 dispersed
Blo03g00917 Blo-Chr3:35175615 Blo03g01511 Blo-Chr3:42001529 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00917 - - csv:101222886 572.778