Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00921 ATGAGCGATACGGATTGTTCCAATACTCGGAAAATCCGAAACATATGCATACTGGCCCATGTTGATCACGGCAAAACTACGCTTGCCGACCATCTGATTGCCGCGTCGGGTGGCGGCGTACTCCACCCAAAGCTGGCTGGCCGCCTTCGATTCATGGACTATCTGGACGAAGAGCAAAGGCGGGCTATAACAATGAAAAGCTCTTCTATCGCTCTTGCCTACAGAGACTATTCAATAAACCTCATAGACTCCCCTGGACATATGGACTTCTGTAGTGAGGTTTCAACTGCTGCTAGACTCAGCGATGGGGCTTTGGTGCTGGTTGATTCGGTGGAGGGCGTTCACATTCAAACACACGCAGTTTTGCGCCAAGCTTGGATTGAGAAGCTAACACCTTGTTTAGTTCTTAATAAGATTGATAGATTGATTTGTGAGTTGAAGTTGAGCCCCATAGAAGCCTATAACCGGCTGTTGAGGATCATTCATGAAGTTAATGGGATTATGAGTGCATATAAGTCGGAGAAGTATTTGTCGGATGTGGATTCGTTACTAGCTGGACCTTCATTTTATGCATCAAAACTTGGGGCTAGTGTAGCCACTTTGAAGAAGGCATTGTGGGGGCCTCGTTATTTCAACCCAAAAACGAAGATGATTGTGGGAAAGAAGGGATTAAGTGGTGGAAGTAAAGCTCGGCCGATGTTTGTTCAGTTCGTGTTGGAGCGGCTATGGGAAGTGTACAAGGCAGCTTTGGACTCCGATGGGGACAAAGATGTTCTTAGAAAAGTTAATAGCACATTTAATTTGAACGTTCCAGCCCGTGAGCTGTCTAACAAGGATCCGAAAGTTGTTCTTCAAGCTATTATGAGCCGGTGGCTTCCTTTGTCCGAGGCAATACTTTCAATGGTTGTCAAGTGTATGCCAGACCCAATTGCAGCACAATCATTTCGAATATCACCTCCATGCGTTGCTTTTGTGTCCAAAATGTTTGCTGTTCCAATGAAAATGATTCCTCAGAGGGGGCCCCAAGGGGAGATTGTGAGCAACTTATCCAACGAGGGGGGAGTAGGTGACTCAGATGAGTGTTTTCTGGCGTTTGCACGGGTATTTAGCGGCGTACTTTGTTCGGGGCAGAAAATTTTTGTGCTCTCTGCTTTGTATGATCCATTACTAGAGGAATCGATGGAGAAGCATGTTCAGGAGGCTGAGTTGCATTCATTGTACTTAATGATGGGGCAAGGCTTAAAACCAGTGAGATCCGTTAAGGCAGGGAATGTTGTGGCCATACGTGGTCTTGGCCAGCATATCTTGAAAAGTGCAACTCTTTCGTCTACAAAATATTGTTGGCCTTTCTCTAGTATGGAATTTCAAGTTTCTCCAACACTTAGAGTTGCAATCGAACCTTCTGACCCCGCAGATATGGTTGCACTTTTAAGAGGCTTAAGACTTCTAAATCGAGCAGACCCATTTGTAGAGGTCACTGTTTCTGCTAGAGGGGAACATGTTCTCGCTGCGGCCGGAGAAGTTCATCTTGAGAGATGCATAAAGGATTTGAAAGAGAGATTTGCCAAGGTAAGCTTGGAAGTCTCTCCACCTCTTGTATCTTATAAAGAGACTATCGAAGGAGAGAGCAGTAAAGTTTCCGAAAGTAAAAGATCAAGATTAGGACAAAATGAGAGTTCGGTGGAAACAATTAAAAAGCGTATAATGGAAGCTGTTTTTAGCGACATTTCGCCGACAAACGAGAAAGATAACGATGGAGACCGAGCTGACAAGTATAAAGCAATGTGGTTGAAACTCCTCGAGAGGATTTGGGCTCTTGGACCTCGGCAGATTGGTCCAAACATTCTATTTACCCCAGAGTTTAAAAGGAAGGATTCTGAAAATTTTGCAGAGAGTTTTGAGAGTAGTGTTGTATCTGGATTTCAGTTGGCTACAGCGGCTGGACCTTTATGTGATGAACCAATGTGGGGCTTGGGATTTATTGTCGAAGCCTATGTTTATCCATCGACTGATCACCCGCATGAACTTGAAATGTCCATACTCTCCGATCAGCGAGGAATTTTCACCGGACAAGTTATGACAGCAGTCAAAGAGGCTTGTAGAAGTGCTCTACTTCAAAAGAAGCCTCGGCTGGTTGAAGCCATGTACTTTTGTGAATTGAGCACACCCACTGAATACCTCGGATCTATGTATGCTGTACTGGCCCGAAGGCGGGCCCGTGTTTTGAAGGAAGAAATGCAAGAGGGTTCGTCTTTGTTTACCGTCCATGCATATGTGCCGGTTTCCGAGAGCCTCGGCTTTGCAGACGAGTTAAGAAGATGGACATCTGGAGCTACTAGTGCTCTCCTTGTGCTTAGCCATTGGGAAGCTCTTCCTGAAGATCCTTTCTTTGTACCCAAGACGGAAGAAGAAATTGAAGAGTTTGGAGACGGTTCGAGTGTGCTTCCTAATACAGCCCGGAAACTCATTGATGCAGTCCGAAGGCGAAAAGGTCTTCCCGTTGAAGAAAAAGTTGTCCAACACGCAACAAAGCAGAGGACTTTGGCCCGGAAAGTGTAA 2559 45.45 MSDTDCSNTRKIRNICILAHVDHGKTTLADHLIAASGGGVLHPKLAGRLRFMDYLDEEQRRAITMKSSSIALAYRDYSINLIDSPGHMDFCSEVSTAARLSDGALVLVDSVEGVHIQTHAVLRQAWIEKLTPCLVLNKIDRLICELKLSPIEAYNRLLRIIHEVNGIMSAYKSEKYLSDVDSLLAGPSFYASKLGASVATLKKALWGPRYFNPKTKMIVGKKGLSGGSKARPMFVQFVLERLWEVYKAALDSDGDKDVLRKVNSTFNLNVPARELSNKDPKVVLQAIMSRWLPLSEAILSMVVKCMPDPIAAQSFRISPPCVAFVSKMFAVPMKMIPQRGPQGEIVSNLSNEGGVGDSDECFLAFARVFSGVLCSGQKIFVLSALYDPLLEESMEKHVQEAELHSLYLMMGQGLKPVRSVKAGNVVAIRGLGQHILKSATLSSTKYCWPFSSMEFQVSPTLRVAIEPSDPADMVALLRGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCIKDLKERFAKVSLEVSPPLVSYKETIEGESSKVSESKRSRLGQNESSVETIKKRIMEAVFSDISPTNEKDNDGDRADKYKAMWLKLLERIWALGPRQIGPNILFTPEFKRKDSENFAESFESSVVSGFQLATAAGPLCDEPMWGLGFIVEAYVYPSTDHPHELEMSILSDQRGIFTGQVMTAVKEACRSALLQKKPRLVEAMYFCELSTPTEYLGSMYAVLARRRARVLKEEMQEGSSLFTVHAYVPVSESLGFADELRRWTSGATSALLVLSHWEALPEDPFFVPKTEEEIEEFGDGSSVLPNTARKLIDAVRRRKGLPVEEKVVQHATKQRTLARKV 852
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 35220131 35223259 + BLOR12102 Blo03g00921 58385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00921 852 PRINTS GTP-binding elongation factor signature 60 68 IPR000795 GO:0003924|GO:0005525
Blo03g00921 852 PRINTS GTP-binding elongation factor signature 14 27 IPR000795 GO:0003924|GO:0005525
Blo03g00921 852 PRINTS GTP-binding elongation factor signature 132 141 IPR000795 GO:0003924|GO:0005525
Blo03g00921 852 PRINTS GTP-binding elongation factor signature 96 107 IPR000795 GO:0003924|GO:0005525
Blo03g00921 852 PRINTS GTP-binding elongation factor signature 80 90 IPR000795 GO:0003924|GO:0005525
Blo03g00921 852 CDD eEF2_snRNP_like_C 713 792 - -
Blo03g00921 852 Gene3D Yeast translation eEF2 (G' domain) 189 292 - -
Blo03g00921 852 Pfam Elongation factor Tu GTP binding domain 11 169 IPR000795 GO:0003924|GO:0005525
Blo03g00921 852 CDD EF2_II 320 444 - -
Blo03g00921 852 PANTHER ELONGATION FACTOR-LIKE GTPASE 1 8 851 - -
Blo03g00921 852 SUPERFAMILY EF-G C-terminal domain-like 713 811 IPR035647 -
Blo03g00921 852 Gene3D - 542 707 IPR014721 -
Blo03g00921 852 Gene3D - 709 844 - -
Blo03g00921 852 SMART EFG_C_a 710 799 IPR000640 -
Blo03g00921 852 Gene3D Translation factors 303 456 - -
Blo03g00921 852 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 10 310 IPR000795 GO:0003924|GO:0005525
Blo03g00921 852 SUPERFAMILY Translation proteins 316 453 IPR009000 -
Blo03g00921 852 SUPERFAMILY EF-G C-terminal domain-like 457 531 IPR035647 -
Blo03g00921 852 Pfam Elongation factor Tu domain 2 363 441 IPR004161 GO:0005525
Blo03g00921 852 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 8 851 - -
Blo03g00921 852 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 307 IPR027417 -
Blo03g00921 852 Gene3D Elongation Factor G (Translational Gtpase), domain 3 458 534 - -
Blo03g00921 852 Gene3D - 2 188 IPR027417 -
Blo03g00921 852 CDD aeEF2_snRNP_like_IV 530 717 - -
Blo03g00921 852 SUPERFAMILY Ribosomal protein S5 domain 2-like 533 712 IPR020568 -
Blo03g00921 852 Pfam Elongation factor G C-terminus 711 795 IPR000640 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00921 Blo-Chr3:35220131 Blo04g00650 Blo-Chr4:5687685 2.27E-24 dispersed
Blo03g00921 Blo-Chr3:35220131 Blo13g00321 Blo-Chr13:18130516 6.73E-137 transposed
Blo03g00921 Blo-Chr3:35220131 Blo04g01262 Blo-Chr4:25545836 2.71E-136 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00921 K03234 K14536 mnt:21386190 1191.02