Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00925 ATGGCTGTTGTTACCTTCTCTGATCTCCATACTGAAGCTGGCTTGAAATCACTGGATGATTTCCTCTTTGGAAAATCTTACATTTCCGGGGACAAGCTATCTAAAGATGATATAAAGGTTTTTGCGGTTATTTCTAACAGGCCGTCTGATTCCTTTCCTAATGCTGCTAGTTGGTATGATTGTGTCTCTTCTCATCTTGCCCCAAGTTTCCCTGGAAAAGCTACCGGTGTAAGAGTCGGTGGTAAAGCTGCCGCTCTTAAAGATGCCCCTGCCGAGAAACTTGAGAAGGAAGTTCCTGCTGAAGAAGATGATGACGACCTTGGTCTCTTTGATGATGAAACGGAAGAGGATAAGAAAGTGGCAGAAGAGAGGGAGGCAGCCAAAAAATCATCCAGCAAGAAGAAAGAGAGTGGAAAATCTTCTGTTCTTTTGGATGTAAAACCATGGGATGACGAAACAGACATGAAGAAACTAGAAGAAGCAGTTCGCAGTATTGAGATGCCTGGTCTCTTGTGGGGTGCATCAAAACTTGTGCCAGTTGGATATGGAATAAAGAAGCTGCAGATCATGCTCACCATCGTCGATGACCTCGTTTCGGTCGATGCCCTTATAGAGGAACAGCTTACAGTCGAGCCATGCAATGAGTACATCCAAAGCTGTGACATTGCTGCCTTCAACAAAATCTAA 687 44.25 MAVVTFSDLHTEAGLKSLDDFLFGKSYISGDKLSKDDIKVFAVISNRPSDSFPNAASWYDCVSSHLAPSFPGKATGVRVGGKAAALKDAPAEKLEKEVPAEEDDDDLGLFDDETEEDKKVAEEREAAKKSSSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSIEMPGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDALIEEQLTVEPCNEYIQSCDIAAFNKI 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 35241421 35244613 + BLOR12106 Blo03g00925 58389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00925 228 CDD EF1B 142 228 IPR014038 GO:0003746|GO:0006414
Blo03g00925 228 PANTHER ELONGATION FACTOR 1-BETA 2 4 228 - -
Blo03g00925 228 SUPERFAMILY GST C-terminal domain-like 11 66 IPR036282 -
Blo03g00925 228 Gene3D - 132 228 IPR014717 -
Blo03g00925 228 MobiDBLite consensus disorder prediction 98 112 - -
Blo03g00925 228 SMART EF1_GNE_2 139 228 IPR014038 GO:0003746|GO:0006414
Blo03g00925 228 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 217 228 IPR001326 GO:0003746|GO:0005853|GO:0006414
Blo03g00925 228 MobiDBLite consensus disorder prediction 88 134 - -
Blo03g00925 228 MobiDBLite consensus disorder prediction 113 134 - -
Blo03g00925 228 Pfam EF-1 guanine nucleotide exchange domain 141 228 IPR014038 GO:0003746|GO:0006414
Blo03g00925 228 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 4 228 - -
Blo03g00925 228 SUPERFAMILY eEF-1beta-like 136 228 IPR036219 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00925 Blo-Chr3:35241421 Blo04g01173 Blo-Chr4:20660905 4.98E-85 dispersed
Blo03g00925 Blo-Chr3:35241421 Blo03g01516 Blo-Chr3:42044857 2.23E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00925 K03232 - pvy:116130992 311.997