Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo03g00925 | ATGGCTGTTGTTACCTTCTCTGATCTCCATACTGAAGCTGGCTTGAAATCACTGGATGATTTCCTCTTTGGAAAATCTTACATTTCCGGGGACAAGCTATCTAAAGATGATATAAAGGTTTTTGCGGTTATTTCTAACAGGCCGTCTGATTCCTTTCCTAATGCTGCTAGTTGGTATGATTGTGTCTCTTCTCATCTTGCCCCAAGTTTCCCTGGAAAAGCTACCGGTGTAAGAGTCGGTGGTAAAGCTGCCGCTCTTAAAGATGCCCCTGCCGAGAAACTTGAGAAGGAAGTTCCTGCTGAAGAAGATGATGACGACCTTGGTCTCTTTGATGATGAAACGGAAGAGGATAAGAAAGTGGCAGAAGAGAGGGAGGCAGCCAAAAAATCATCCAGCAAGAAGAAAGAGAGTGGAAAATCTTCTGTTCTTTTGGATGTAAAACCATGGGATGACGAAACAGACATGAAGAAACTAGAAGAAGCAGTTCGCAGTATTGAGATGCCTGGTCTCTTGTGGGGTGCATCAAAACTTGTGCCAGTTGGATATGGAATAAAGAAGCTGCAGATCATGCTCACCATCGTCGATGACCTCGTTTCGGTCGATGCCCTTATAGAGGAACAGCTTACAGTCGAGCCATGCAATGAGTACATCCAAAGCTGTGACATTGCTGCCTTCAACAAAATCTAA | 687 | 44.25 | MAVVTFSDLHTEAGLKSLDDFLFGKSYISGDKLSKDDIKVFAVISNRPSDSFPNAASWYDCVSSHLAPSFPGKATGVRVGGKAAALKDAPAEKLEKEVPAEEDDDDLGLFDDETEEDKKVAEEREAAKKSSSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSIEMPGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDALIEEQLTVEPCNEYIQSCDIAAFNKI | 228 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 35241421 | 35244613 | + | BLOR12106 | Blo03g00925 | 58389 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo03g00925 | 228 | CDD | EF1B | 142 | 228 | IPR014038 | GO:0003746|GO:0006414 | |
Blo03g00925 | 228 | PANTHER | ELONGATION FACTOR 1-BETA 2 | 4 | 228 | - | - | |
Blo03g00925 | 228 | SUPERFAMILY | GST C-terminal domain-like | 11 | 66 | IPR036282 | - | |
Blo03g00925 | 228 | Gene3D | - | 132 | 228 | IPR014717 | - | |
Blo03g00925 | 228 | MobiDBLite | consensus disorder prediction | 98 | 112 | - | - | |
Blo03g00925 | 228 | SMART | EF1_GNE_2 | 139 | 228 | IPR014038 | GO:0003746|GO:0006414 | |
Blo03g00925 | 228 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 2. | 217 | 228 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
Blo03g00925 | 228 | MobiDBLite | consensus disorder prediction | 88 | 134 | - | - | |
Blo03g00925 | 228 | MobiDBLite | consensus disorder prediction | 113 | 134 | - | - | |
Blo03g00925 | 228 | Pfam | EF-1 guanine nucleotide exchange domain | 141 | 228 | IPR014038 | GO:0003746|GO:0006414 | |
Blo03g00925 | 228 | PANTHER | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER | 4 | 228 | - | - | |
Blo03g00925 | 228 | SUPERFAMILY | eEF-1beta-like | 136 | 228 | IPR036219 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g00925 | Blo-Chr3:35241421 | Blo04g01173 | Blo-Chr4:20660905 | 4.98E-85 | dispersed | |
Blo03g00925 | Blo-Chr3:35241421 | Blo03g01516 | Blo-Chr3:42044857 | 2.23E-33 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo03g00925 | K03232 | - | pvy:116130992 | 311.997 |