Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00972 ATGGGGAAGGTGGCTCTTGGTTTGGCGATGGGCGTAGCGGCGGCGACTTGCGCAGTTGCTGCGGTTATGGTGAGTAGAAGGGTGAAGAGCAGAAACAAATGGAGGAGAGTGGTTGGGGTGTTGAGGGAGCTAGAGGAAGCTTGTGATACGCCAGTTAGGAGGCTTAAACAAGTAGTGGATGCTATGGCCGTGGAGATGCATGCTGGTTTGGCCTCCGAAGGTGGTTCCAAACTCAAAATGCTACTCACTTTTGTTGATGACCTACCTAATGGGAGTGAGAAAGGAACTTTTTACGCTCTTGATTTGGGTGGAACTAATTATAGAGTCTTAAGGGTCCGATTGAGAGGTAGAAGATCCTCCTCCGTAATAGAACATGATGTGGAACGGCAGCCAATTCCTCAACATTTAATGACTGGTACAAGCGAGGATTTATTTGAGTACATTGCTTCATCAATAAAGGAGTTTGTTGATAAAGAAGATGAATCCAAGTTTTCATTGGCCAGTAGAAGGGAACTGGGGTTTACATTCTCTTTTCCCGTGAAGCAAACTTCTGTATCATCGGGCTTGTTAATTAAGTGGACAAAAGGATTTTCTATTGAGGATACGGTGGGAAAAGAGGTGGCCGGATATTTACAAGCAGCTTTGTTGAGAAAGAGTCTAGATATGAGAGTTGCAGCGTTGATTAATGACACCGTGGGAACATTAGCCCTTGGACATTATCATGATGAGGACACTGTTGCTGCGGTGATCATTGGAACGGGTACAAATGCTTGTTATTTGGAGCGGACAGATGCCATTATCAAGTGTCAGGGCCTTCTTACAAGTTCTGGGTGTATGGTTGTCAACATGGAATGGGGAAGCTTTTGGTCATCTCACTTGCCTAGAACATCTTACGATGTTGATTTAGATGCAGATAGCCCCAATCCAAATGAGCAGGGCTTTGAGAAAATGATTTCAGGGATGTATTTGGGCGACATTGTGAGGAGAGTGATCTTTAAGATGTCTCAAGTGTCTGATACTTGTGTCCCTGCTTCTTCAAGGTTATCCATGCCCTTTGTTTTGAGAACACCATTAATGGCCGCCATGCATGAAGATGACTCCCCAGACTTATCTGAGGTAGCACGGATCTTGAAAGATGTCTTCGAGATCCCGGAAGTCTCATTACATGTCCGGAAGCTTGTAGTAAAAGTATGCGATGTGGTGGCTCGAAGAGCAGCCCGACTGGCAGCTGCAGGCATTGTGGGTATTCTAAAGAAGATCGGGCGGGATGGGAGCGGTGGAATTACAGGCGGCAGAATCAGAAGTGATACAGAAATTCGAAGAAGCGTAATAGCAATAGAAGGGGGATTATATTCAAGTTATACAACCTTTAGAGACTATTTGCATGAAAGTTTAGTCGAAATCCTCGGAGAAAAGGTTGCAAAACATGTGATTCTCAAAGTCACTGAAGATGGGTCAGACTTCTTCTTCTTCGCGTCGAGTCTCGACTCCTACGAGCGGAGAGGCGACGAAGAAGTAGAGAGCCAACTCAGGCGAGCGCTTCGTGACTCAGGCGGCGTCCTAGATGGAGGACTAGTGAAAATTTCTCCTGAGGTTGCTGATGCTTTGTCCCGCGGGCATCCTGTCGTGGCTCTCGAATCCACCATCATCTCTCATGGGATGCCATATCCTCAAAATTTGGAAACTGCAAAGGAGGTGGAGAATATAGTGAGGGAGAATGGAGCAGTTCCTGCCACTATTGCAATTTTAGATGGCATTCCATGCGTAGGTCTGAGTAAAGAAGAACTGGAAAGGCTGGCTAATTTGGGAACAAAAGCTCAGAAGACGGCTCGAAGGGACATTGCACAAGTTGTTGCAAGCAGAGGAAATGGTGCAACTACTGTCTCTGGAACCATGTTTTTTGCTTCTATGGTTGGTATTCCTGTGTTTGTGACCGGAGGCATTGGTGGAGTCCATAGGCATGGCGAGCAAACCATGGATGTATCTTCTGATCTCACTGAGCTTGGAAGGACCCCTGTAGCAGTTATCTCTGCCGGTGTAAAATCAATACTAGATATACCCAGGACTCTTGAATATTTGGAAACCCAAGGAGTCTGTGTTGCTACTTACCAATCAAACGAGTTTCCCGCATTTTTCGCCGAAACAAGCGGCTCCAAGGCTCCCCACCGTTTGGACTCCCCAGAAGAAGCTGCACGACTCATCGATGCAAGCATGGAGCTTAGGCTTGGAAATGGAATTCTAATTGCTGTTCCTATTCCAAAAGAGCATGCAGCCTCCGGAAACTCGATCGAGTATGCAATAAAAAAGGCTCTACAAGAAGCCAGAACAATGCTCTCGTTGGTTCTCGGATCGCTGTCGCACTTGCTGTCCTCAGAAATAGATATTGCACAGGCGAACCCGGTCGGGTGTCATAGAAGAATGATCTCGAGTCTATCATCGGCTTCTATTGATGAAGATGGTTCGTCTTCATCACCTCTTCAATTCTTTTCCATGATGTCTCTTTCACCAACCTTCGGATCGCCATATCCATGGCTCAGAGAGCTGAAATCTGAAGAAAGGGGCCTGTATCTGATCCATTTGCTGCTAACTTGTGCAAATCATGTGGCCTCTGGCAGCCTTGAAAATGCAAATATTTCCTTGGAGCAAATCTCCCATCTGGCCTCCCCAGTTGGCGATACAATGCAGCGGATTGCTGCTCATTTCACTGAGGCGCTTGGCGATCGAATCCTCAAATCTTTGCCGGGGATCTACAAGGCTCGATATTTGACTCAAATCCCTGTTGTTTCTGAGGAATTTGTTGTTAGAAAACTGTTTTTCGAAATGTTTCCATTCCACAAAGTGGCTTTTTTGCTGACAAATCAAGCCATTATGGAAGCCATGGAGGGAGAAAAGATGGTTCATATTATTGATCTCCATGCTGCTGAACCAGCGCAGTGGGTTGCCCTTCTTCAAGCTTTGAGCTCCAGACCAGATGGTCCACCCCATTTGAGACTCACTGGAGTTCATCAACAGAAAGAGGTTTTGGATCATATGGCTCGAAGACTAACTGAAGAAGCCGAAAAATTGGATATTCCTTTTCAGTTCAATTCGATAGTCTGCAAATTGGAGAATCTAGTCATTGAAAATCTTCGTGTAAAAACTGGGGAAGCTCTTGCAATTAGCTCAGTTCTTCAATTGCACACCCTTTTGGCCTCGGACGAAGAACCTCAAAGAAGAAGTTTAAATGGAGCTCAATTTTATCGAAATGTGCAAGCGAACAACGGACCGATGGGAGAGTTGATCGATAAAGAGATGGTTAATGGGTGTAGTCCGAGCTCCGATTCGGCCTCCTCTTCGCCATTATCGCAGTCTAGTTCGACGAAGATAGATAGTTTTCTCAATGCCTTATCGGTTTTGACCCCGAAAGTGATGGTAGTTACAGAGCAAGACTGTAATCACAATGGATCCACTCTCATGGAGAGGCTATTGGAAGCTCTCCACTCATATGCAGCCATTTTCGACTGCTTGGAGTTCACCATGGGAAGAACTCCGTATGAGAGACTGAAGGTGGAGAAGATGATATTCGGAGAGGAAATCAAGAACATCATTGCTTGCGAGGGAATCGAACGGAAGGCAAGGCACGAAAAGCTTGAGAAATGGATTCATCGGCTCGAATCGGTCGGGTTTGGAAATGTGAATTTGAGCAACTACGGCATTTCACAAGTGAAAAGGTTGTTGTTGGGCTATGGCTGCGACGGATACAGGATCAAGGAAGAGAGCGGCTGCGTGGTCATCTGTTGGCACGACCGGCCGTTGTTTTCGGTGTCGGCTTGGAGGGATAGGAGGTAG 3828 46.19 MGKVALGLAMGVAAATCAVAAVMVSRRVKSRNKWRRVVGVLRELEEACDTPVRRLKQVVDAMAVEMHAGLASEGGSKLKMLLTFVDDLPNGSEKGTFYALDLGGTNYRVLRVRLRGRRSSSVIEHDVERQPIPQHLMTGTSEDLFEYIASSIKEFVDKEDESKFSLASRRELGFTFSFPVKQTSVSSGLLIKWTKGFSIEDTVGKEVAGYLQAALLRKSLDMRVAALINDTVGTLALGHYHDEDTVAAVIIGTGTNACYLERTDAIIKCQGLLTSSGCMVVNMEWGSFWSSHLPRTSYDVDLDADSPNPNEQGFEKMISGMYLGDIVRRVIFKMSQVSDTCVPASSRLSMPFVLRTPLMAAMHEDDSPDLSEVARILKDVFEIPEVSLHVRKLVVKVCDVVARRAARLAAAGIVGILKKIGRDGSGGITGGRIRSDTEIRRSVIAIEGGLYSSYTTFRDYLHESLVEILGEKVAKHVILKVTEDGSDFFFFASSLDSYERRGDEEVESQLRRALRDSGGVLDGGLVKISPEVADALSRGHPVVALESTIISHGMPYPQNLETAKEVENIVRENGAVPATIAILDGIPCVGLSKEELERLANLGTKAQKTARRDIAQVVASRGNGATTVSGTMFFASMVGIPVFVTGGIGGVHRHGEQTMDVSSDLTELGRTPVAVISAGVKSILDIPRTLEYLETQGVCVATYQSNEFPAFFAETSGSKAPHRLDSPEEAARLIDASMELRLGNGILIAVPIPKEHAASGNSIEYAIKKALQEARTMLSLVLGSLSHLLSSEIDIAQANPVGCHRRMISSLSSASIDEDGSSSSPLQFFSMMSLSPTFGSPYPWLRELKSEERGLYLIHLLLTCANHVASGSLENANISLEQISHLASPVGDTMQRIAAHFTEALGDRILKSLPGIYKARYLTQIPVVSEEFVVRKLFFEMFPFHKVAFLLTNQAIMEAMEGEKMVHIIDLHAAEPAQWVALLQALSSRPDGPPHLRLTGVHQQKEVLDHMARRLTEEAEKLDIPFQFNSIVCKLENLVIENLRVKTGEALAISSVLQLHTLLASDEEPQRRSLNGAQFYRNVQANNGPMGELIDKEMVNGCSPSSDSASSSPLSQSSSTKIDSFLNALSVLTPKVMVVTEQDCNHNGSTLMERLLEALHSYAAIFDCLEFTMGRTPYERLKVEKMIFGEEIKNIIACEGIERKARHEKLEKWIHRLESVGFGNVNLSNYGISQVKRLLLGYGCDGYRIKEESGCVVICWHDRPLFSVSAWRDRR 1275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 35821317 35839737 - BLOR12153 Blo03g00972 58436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00972 1275 Gene3D - 83 486 - -
Blo03g00972 1275 SUPERFAMILY Actin-like ATPase domain 23 242 IPR043129 -
Blo03g00972 1275 Hamap Pseudouridine-5'-phosphate glycosidase [psuG]. 530 874 IPR007342 GO:0004730
Blo03g00972 1275 PANTHER HEXOKINASE-3 1 487 - -
Blo03g00972 1275 Pfam Hexokinase 41 240 IPR022672 GO:0005524|GO:0005975|GO:0016773
Blo03g00972 1275 SUPERFAMILY Actin-like ATPase domain 244 486 IPR043129 -
Blo03g00972 1275 MobiDBLite consensus disorder prediction 1094 1115 - -
Blo03g00972 1275 Gene3D Indigoidine synthase domain 523 783 IPR022830 GO:0016798
Blo03g00972 1275 PRINTS Hexokinase family signature 247 261 - -
Blo03g00972 1275 PRINTS Hexokinase family signature 312 334 - -
Blo03g00972 1275 PRINTS Hexokinase family signature 172 197 - -
Blo03g00972 1275 PRINTS Hexokinase family signature 98 114 - -
Blo03g00972 1275 PRINTS Hexokinase family signature 224 240 - -
Blo03g00972 1275 PRINTS Hexokinase family signature 394 416 - -
Blo03g00972 1275 ProSiteProfiles GRAS family profile. 848 1272 IPR005202 -
Blo03g00972 1275 PANTHER HEXOKINASE 1 487 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Blo03g00972 1275 Pfam Hexokinase 247 486 IPR022673 GO:0005524|GO:0005975|GO:0016773
Blo03g00972 1275 ProSiteProfiles Hexokinase domain profile. 35 495 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Blo03g00972 1275 MobiDBLite consensus disorder prediction 1101 1115 - -
Blo03g00972 1275 Gene3D - 61 483 - -
Blo03g00972 1275 ProSitePatterns Hexokinase domain signature. 172 197 IPR019807 GO:0004396|GO:0005524|GO:0006096
Blo03g00972 1275 Pfam Indigoidine synthase A like protein 531 776 IPR007342 GO:0004730
Blo03g00972 1275 SUPERFAMILY Indigoidine synthase A-like 525 774 IPR022830 GO:0016798
Blo03g00972 1275 Pfam GRAS domain family 857 1272 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00972 Blo-Chr3:35821317 Blo04g00411 Blo-Chr4:3372427 0 dispersed
Blo03g00972 Blo-Chr3:35821317 Blo01g00528 Blo-Chr1:5814410 4.22E-180 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12145 PF03514 GRAS 6.60E-134 CL0063 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00972 K00844 - qsu:112003471 679.093