Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00974 ATGGCTGAAACTCCGAGGAGGAGCCTCCGATCACCTGCCAAAAACAATCTCTCGCCGCTTTCTAATCAGAAACTCACTTCTCCAATCGCGATCCCACAAGCCCTAACTCCTTCAAGGTCGACGCGACGGCATTCAGTTGGACTAGACTCGATTAGGAAGAATTGCGATGAGGAAATTGAGAATTCCTTTGGAATTTCTGTCAAAAGAAGGAGAGATGCTGAATTTATGGAGGGATTCGAGCCCAAGACGCCTCGTAGATCTATTCGATTTGGTGAAGATATTAGAGAAGATTGCGAAGAAACTTCTAGTAATGGGGCAATCAGTGGAGTTCGAAAACAACGGGAAACTGAGACAAGTGATGAACTAGCGAAAACTACAAAATCTGCAAAAGGACGTCAGAATGTGAAGCATCGAGAGGGGACCCATCCTTTGGAAGATACGTTCTCTCCTGTGTCACCCGAACAAACAGAGACAAAGAAGAGGAGATACAACGAAAAAACAGTGGCTAGAAAAGCTTTGGCTTCAAAGAATGTAATATCTGGCAATAAGAAGAAGAGTGATATGGGATCAAAGAGACGCGTGTACTATAGAAAAGTGGTCTACGATGGAGGAGAATTTGAAGTGAAAAACGATGTATATGTGAAGAGGAGAGAGGACGGGAGCTCGGATGATGAACCGGAAATGGAAGACTGTAGAATGTGCTTCGCGTCTGGAAAGGCTGTAATGATTGAATGCGATGATTGTTTAGGTGGGTTCCATTTGAAATGCTTGAAGCCGCCTTTGAAGGAGATTCCTGAGGGGGATTGGATTTGTGAATTTTGTCAGGCTCGCAAAATGGGTAAAAATGTGGCGCTTCCAAAACCTCCAAAGGGAAAAAAACTGAGCAGGACGATGAGAGAGAAGCTACTATTTGGTGATCTGTGGGCTGCTCGCATTGAAAATTTATGGAAGGAGGCTGACGGTAGCTACTGGTGCCGAGTTCGTTGGTATATAATCCCAGACGAGACTTCAGCTGGAAGGCAAGCACATAACTTGAGGAGGGAGCTTTATCTCACGAATGATTATGCTGACATTGAGATGGAAACCATTATTCGACAGTGTAATGTCATGAGCCCAAAAGAATATGCCAGGGCAAAAAATGAAGGGGATGACATCTTCTTATGCGAGTATGAGTATGACATTCGTTGGCACAGTTTCAGGCGCATTGCTGATATAGATGATGTTGAAGAGGATGGAGGAGCAACTAACAGTGATGAAGATTGGAATTTTAGCAAGGATTCAGACTCTGATACAGATGAAGAGTTAGAGTATGAAGAAGAGACTGAGAAAAATTTACGAGCCAGATCATCCATAGCTCAAGATTCAGCTGCAAACTCAAGGAAGGGAAAGTTCTTTGGACTTCAAAAGATAGGGGTGAAGAAAATCCCGGACCATGTGAGATGCCACAAGCAAACTGAACTCGAGAAAGCAAAGGCAGCACTTACTTTAGCATCATTACCAAAGTCTCTACCTTGCAGGAATAAAGAAATGGAGGAGATAACTGCATTTATAAAAGGAGCGATTAGTGATGACAAATGTTTGGGGCGTTGCCTTTATATCCATGGTGTTCCTGGAACTGGCAAGACGATGACTGTACTTGCGGTATTGAGAAATCTAAAGGGCGAAGTTGATTCTGGAAGTATAAGACCTCACTGTTTTGTAGAGGTTAATGTTCTAAAGCTAGCATCACCAGAAAACATATATAGGGTTATATATGAGGCATTAACTGGGCACAGAGTTAGTTGGAAAAAAGCTCTTCAATTGCTGACCGAACGCTTTTCAGATGGAAATCAAGCTGCCAAAGAGGATGAAAGACCTTGTGTTCTGCTCATTGATGAGCTTGATCTTCTTGTAACAAGAAATCAGTCGGTTCTGTACAACATTCTCGATTGGCCAACTAAACCACACGCCAATTTGGTTGTGATAGGGATAGCAAATACTATGGATCTTCCAGAAAAGTTGCTTCCCCGTATTTCAAGTCGCATGGGCATTGAAAGACTTTGCTTTGGCCCCTATAATTATCAGCAGCTTCAAGAAATAATCTCAAGTCGCCTCAAAGGAATTAATGCATTTGAAAAACAAGCTATAGAATTTGCATCAAGGAAGGTAGCAGCTATTTCAGGAGATGCACGACGTGCACTTGAGATATGCAGGCGCGCTGCGGAAATTGCTGATTACCATTTAAAGTTGACTAAAACTTCTAATGTTGTTTCAGAAGGAAAAGAGCTTGTTGTTATGGCCGAGGTAGAAGCAGCCATTCAGGAAATGTTCCAAGCGCCTCATATTCAAGTGATGAAAAACAGTTCCAAAATTAGTAAAATATTTTTGACAGCTATGGTTCATGAACTCTATAAGTCTGGAATGGGCGAAACCACCTTTGAAAAGCTGGCAATGGTTGTTTCATGTCTCTGTACGAGCAATGGAGAAACATTTCCTGGATATGATGCACTGTTGAAAGTTGGTTGTAAGTTGGGCGAAAGCAGAATTATTTTATGTGAAGCAGGAGCTAAGCACATGTTGCAAAAATTACAGTTCAATTTCCCAAGTGATGATGTGTCATTTGCGTTAAAGGGCAGCAAGGAGCTTCCATGGTTGGCCAAGTATTTATAA 2649 42.24 MAETPRRSLRSPAKNNLSPLSNQKLTSPIAIPQALTPSRSTRRHSVGLDSIRKNCDEEIENSFGISVKRRRDAEFMEGFEPKTPRRSIRFGEDIREDCEETSSNGAISGVRKQRETETSDELAKTTKSAKGRQNVKHREGTHPLEDTFSPVSPEQTETKKRRYNEKTVARKALASKNVISGNKKKSDMGSKRRVYYRKVVYDGGEFEVKNDVYVKRREDGSSDDEPEMEDCRMCFASGKAVMIECDDCLGGFHLKCLKPPLKEIPEGDWICEFCQARKMGKNVALPKPPKGKKLSRTMREKLLFGDLWAARIENLWKEADGSYWCRVRWYIIPDETSAGRQAHNLRRELYLTNDYADIEMETIIRQCNVMSPKEYARAKNEGDDIFLCEYEYDIRWHSFRRIADIDDVEEDGGATNSDEDWNFSKDSDSDTDEELEYEEETEKNLRARSSIAQDSAANSRKGKFFGLQKIGVKKIPDHVRCHKQTELEKAKAALTLASLPKSLPCRNKEMEEITAFIKGAISDDKCLGRCLYIHGVPGTGKTMTVLAVLRNLKGEVDSGSIRPHCFVEVNVLKLASPENIYRVIYEALTGHRVSWKKALQLLTERFSDGNQAAKEDERPCVLLIDELDLLVTRNQSVLYNILDWPTKPHANLVVIGIANTMDLPEKLLPRISSRMGIERLCFGPYNYQQLQEIISSRLKGINAFEKQAIEFASRKVAAISGDARRALEICRRAAEIADYHLKLTKTSNVVSEGKELVVMAEVEAAIQEMFQAPHIQVMKNSSKISKIFLTAMVHELYKSGMGETTFEKLAMVVSCLCTSNGETFPGYDALLKVGCKLGESRIILCEAGAKHMLQKLQFNFPSDDVSFALKGSKELPWLAKYL 882
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 35863924 35870576 - BLOR12155 Blo03g00974 58438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00974 882 SMART PHD_3 230 275 IPR001965 -
Blo03g00974 882 Gene3D - 680 772 - -
Blo03g00974 882 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 493 740 IPR027417 -
Blo03g00974 882 ProSiteProfiles Zinc finger PHD-type profile. 228 277 IPR019787 -
Blo03g00974 882 SMART AAA_5 527 681 IPR003593 -
Blo03g00974 882 MobiDBLite consensus disorder prediction 1 48 - -
Blo03g00974 882 CDD AAA 508 684 - -
Blo03g00974 882 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 163 878 - -
Blo03g00974 882 Pfam BAH domain 310 399 IPR001025 GO:0003682
Blo03g00974 882 MobiDBLite consensus disorder prediction 9 44 - -
Blo03g00974 882 MobiDBLite consensus disorder prediction 98 161 - -
Blo03g00974 882 MobiDBLite consensus disorder prediction 410 454 - -
Blo03g00974 882 SMART BAH_4 262 403 IPR001025 GO:0003682
Blo03g00974 882 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 1 163 878 IPR020793 -
Blo03g00974 882 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 285 IPR013083 -
Blo03g00974 882 Pfam AAA lid domain 704 741 IPR041083 -
Blo03g00974 882 MobiDBLite consensus disorder prediction 113 144 - -
Blo03g00974 882 Gene3D - 299 442 IPR043151 -
Blo03g00974 882 Pfam ATPase family associated with various cellular activities (AAA) 532 678 IPR003959 GO:0005524|GO:0016887
Blo03g00974 882 Pfam PHD-finger 231 276 IPR019787 -
Blo03g00974 882 ProSitePatterns Zinc finger PHD-type signature. 231 274 IPR019786 -
Blo03g00974 882 Gene3D - 483 679 IPR027417 -
Blo03g00974 882 ProSiteProfiles BAH domain profile. 286 403 IPR001025 GO:0003682
Blo03g00974 882 MobiDBLite consensus disorder prediction 425 439 - -
Blo03g00974 882 SUPERFAMILY FYVE/PHD zinc finger 220 281 IPR011011 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00974 Blo-Chr3:35863924 Blo06g00137 Blo-Chr6:5498926 1.59E-06 dispersed
Blo03g00974 Blo-Chr3:35863924 Blo03g00975 Blo-Chr3:35880661 4.96E-101 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12146 PF00004 AAA 5.60E-20 CL0023 Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00974 K02603 - zju:107412606 1195.65