Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00975 ATGGAGGGATTCGAGCCCAAGACGCCACGTAGATCTATTCGATTTGGTGGAGATATTAGAGAAGATTGTGAAGAAACTTCTGGCAATGGGACAATCGGTGGAGTTCGAAAACAACAGGAAACTGAGACAAGTGATGACCCAGCGAAAAGCCCAAAATCTGCAAAAGGACGTCAGAATGTGAAGCAAAGAGAGAGGACCCATCCCTTGGAAGATACGTTCTCTCCTGAGTCACCCAAACAAACGGAGAAAAAGAAGAGGAGATACAATGAAAAAACAGTGGCTAAAAAAGCTTTGGCTTCAAAGAATATAATATCTGACAAAAAGAAGAAGAGTGAAATGGTATCAAAGAGACGTGTGTACTATAAAAAAGTAGTCTATGATGGAGGAGAATTTGAAGTGAAAAATGATGTATATGTGAAGAAGAGAGAGGACGGGAGCTCGGATGATGAACCCGAAATGGAAGAGTGTAGAATATGCTTCGCGTCTGGAAAGGCTGTAATGATTGAATGCGATGATTGTTTAGGTGGTTTCCATTTGAAATGCTTGAAGCCGCCTTTGAAGGAGATTCCTGAGGGCGATTGGATTTGTGAATTTTGTCAGGCTCACAAAATGGGTAAAAATGTGGCGCTTCCAAAACCTCCAAAGGGAAAAAAACTGAGCAGGACGATGAGAGAGAAGCTACTATCTGGTGATCTGTGGGCTGCTCGCATTGAAAATTTATGGAAGGAGGCTGACGGTAGCTACTGGTGCCGAGTTCGTTGGTATATAATCCCGGACGAGACTTCAGCTGGAAGGCAACCACATAACTTGAGGAGGGAGCTTTATCTCACTAATGATTATGCTGACATTGAGTGTAATGTCATGAGCCCAAAAGAATATGCCAGGGCAAAAAATGAAGGGGATGACGTCTTCTTATGTGAGTATGAGTATGACATTCGTTGGCACAGTTTCAGGCGCATTGCTGATATAGATGATGTTGATGAGGATGGAGAAGCAACTAACAGTGATGAAGATTGGAATTTTAGCAAGGATTCAGACTCTGATACAGATGAAGAGTTAGAGTATGAAGAAGAGACTGAGAAAAATTTACAAGCCAGATCATCCTTAGCTCAAGATTCAGCTGCAGAAGAGGGAAAGTTCTTTGGACTTCAAAAGATAGGGGTGAAGAAGATCCTGGAGCATGTGAGATGCCACAAGCAAACTGAACTCGAAAAAGCTAAGGCAGCACTTACTTTGGCATCATTACCAAAGTCTCTACCTTGCAGGAATAAAGAAATGGAGGAGATAACTGCATTTATAAAAGGAGCTATTAGTGATGACAAATGTTTGGGGCGTTGCCTTTATATCCATGGTGTTCCTGGAACTGGCAAGACGATGACTGTACTTGTGGTATTGAGAAATCTAAAGGGCAAAGTTGATTCTGGAAGAATAAGACCTCACTGTTTTGTGGAGGTTAATGTTCTAAAGCTAGCATCACCAGAAAACATATATAGGGTTATATATGAGGCATTAACTGGGCACAGAGTTAGTTGGAAAAAAGCTCTTCAATTGCTGACTGAACGCTTTTCAGACGGAAATAAAGCTCCCAAAGAGGATGAAAGACCTTGTGTTCTGCTCATTGATGAGCTTGATCTTCTTGTAACAAGAAATCAGTCGGTAGCAGCTATTTCAGGAGATGCACGACGTGCACTTGAGATATGCAGGCGCGCTACGGAAATTGTTGATTACCATTTAAAGTTGACTAAAACTTCTAATGCTGTTTCAGAAGGAAAAGAGCTTGTTGTTATGGCCGAGGTAGAAGCAGCCATTCAGGAAATGTTCCAAGCGCCTCATATTCAAGTGATGAAAAACAGTTCCAAAATGAGTAAAATATTTTTGACAGCTATGGTTCATGAACTCTATAAGTCTGGAATGGGCGAAACCACCTTTGAAAAGCTGGCAATGGTTATTTCATGTCTCTGTACGAGCAATGGAGAAACATTTCCTGGATATGATGCACTGTTGAAAGTTGGTTGTAAGTTGGGCGAAAGCAGAATTATTTTATGTGAAGCAGGAGCTAAGCACATGTTGCAAAAATTACAGTTCAATTTCCCAAGTGATGATGTGTCATTTGCTTTAAAAGGCAGCAAGGAGCTTCCATGGTTGGCCAACTTGTTGGTGGGCTGTGGGCTTGACATTGGACCACCCAATGGAGGTGCAAGGTTGGTCAAGCTTGACCTCCGGCCCAAACCTACTGACGCTAACTTGAATGCAAATGAGCGAGCAATGCTGTAG 2274 42.08 MEGFEPKTPRRSIRFGGDIREDCEETSGNGTIGGVRKQQETETSDDPAKSPKSAKGRQNVKQRERTHPLEDTFSPESPKQTEKKKRRYNEKTVAKKALASKNIISDKKKKSEMVSKRRVYYKKVVYDGGEFEVKNDVYVKKREDGSSDDEPEMEECRICFASGKAVMIECDDCLGGFHLKCLKPPLKEIPEGDWICEFCQAHKMGKNVALPKPPKGKKLSRTMREKLLSGDLWAARIENLWKEADGSYWCRVRWYIIPDETSAGRQPHNLRRELYLTNDYADIECNVMSPKEYARAKNEGDDVFLCEYEYDIRWHSFRRIADIDDVDEDGEATNSDEDWNFSKDSDSDTDEELEYEEETEKNLQARSSLAQDSAAEEGKFFGLQKIGVKKILEHVRCHKQTELEKAKAALTLASLPKSLPCRNKEMEEITAFIKGAISDDKCLGRCLYIHGVPGTGKTMTVLVVLRNLKGKVDSGRIRPHCFVEVNVLKLASPENIYRVIYEALTGHRVSWKKALQLLTERFSDGNKAPKEDERPCVLLIDELDLLVTRNQSVAAISGDARRALEICRRATEIVDYHLKLTKTSNAVSEGKELVVMAEVEAAIQEMFQAPHIQVMKNSSKMSKIFLTAMVHELYKSGMGETTFEKLAMVISCLCTSNGETFPGYDALLKVGCKLGESRIILCEAGAKHMLQKLQFNFPSDDVSFALKGSKELPWLANLLVGCGLDIGPPNGGARLVKLDLRPKPTDANLNANERAML 757
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 35880661 35888219 + BLOR12156 Blo03g00975 58439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00975 757 Gene3D - 399 556 IPR027417 -
Blo03g00975 757 ProSiteProfiles Zinc finger PHD-type profile. 153 202 IPR019787 -
Blo03g00975 757 MobiDBLite consensus disorder prediction 1 25 - -
Blo03g00975 757 MobiDBLite consensus disorder prediction 328 368 - -
Blo03g00975 757 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 1 553 715 IPR020793 -
Blo03g00975 757 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 1 109 553 IPR020793 -
Blo03g00975 757 SMART BAH_4 187 321 IPR001025 GO:0003682
Blo03g00975 757 MobiDBLite consensus disorder prediction 343 358 - -
Blo03g00975 757 Gene3D - 95 346 IPR043151 -
Blo03g00975 757 Pfam PHD-finger 156 201 IPR019787 -
Blo03g00975 757 Pfam BAH domain 235 317 IPR001025 GO:0003682
Blo03g00975 757 MobiDBLite consensus disorder prediction 39 92 - -
Blo03g00975 757 MobiDBLite consensus disorder prediction 1 92 - -
Blo03g00975 757 ProSitePatterns Zinc finger PHD-type signature. 156 199 IPR019786 -
Blo03g00975 757 SUPERFAMILY FYVE/PHD zinc finger 146 206 IPR011011 -
Blo03g00975 757 SMART PHD_3 155 200 IPR001965 -
Blo03g00975 757 CDD AAA 424 552 - -
Blo03g00975 757 ProSiteProfiles BAH domain profile. 211 334 IPR001025 GO:0003682
Blo03g00975 757 Pfam AAA lid domain 550 577 IPR041083 -
Blo03g00975 757 Pfam ATPase family associated with various cellular activities (AAA) 448 551 IPR003959 GO:0005524|GO:0016887
Blo03g00975 757 SMART AAA_5 443 580 IPR003593 -
Blo03g00975 757 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 147 217 IPR013083 -
Blo03g00975 757 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 553 715 - -
Blo03g00975 757 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 109 553 - -
Blo03g00975 757 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 409 576 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00975 Blo-Chr3:35880661 Blo06g00137 Blo-Chr6:5498926 2.26E-34 dispersed
Blo03g00974 Blo-Chr3:35863924 Blo03g00975 Blo-Chr3:35880661 4.96E-101 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12147 PF00004 AAA 4.00E-10 CL0023 Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00975 K02603 - rcu:8274440 718.383