Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00976 ATGGCTGATCCGACTAAGAAATTATCATTTTCTCGATGCATTTGTGATGGAGATTTGGTCATTGTCTACGAAAGGCATGACAACATGAAAGCGATCAAATTATGCGAAGGCTCAACATTTCAAAATCGATTCGGAGTATTTAAACATTGTGATTGGATTGGGAAGCCTTTTGGTTCCAAAGTTTTCAGTAATAAGGGAGGGTTTATCTACTTATTGGCACCTACGCCCGAGTTGTGGACTTTGGTGCTAAGCCATAGGACTCAGATTCTTTACATTGCAGACATAAGCTTTGTAATAATGTACATGGAGATTGTTCCGGGCTGTTTAGTTCTTGAATCAGGAACTGGAAGTGGGTCTTTAACCACCTCTCTTGCTCGAGCTGTGGCACCAACCGGACATGTTTATACCTTCGATTTCCATGATCAAAGGGCTGCATCAGCGAGGGAGGATTTTGAGAAGATTGGGCTGAGCAGCTTAGTCACTGTTGGTGTTAGAGATATTCAGGGTGAAGGGTTTCCTGCTGAGTTATCCGGAGCTGCAGATTCCGTTTTCCTGGACCTTCCTCAACCCTGGCTTGCCATTCCTTCCGCCGAAAAAATGTTGAAAGAAGACGGTATTTTGTGTTCCTTCTCCCCATGCATTGAGCAAGTACAACGATCGGCCGAAGCTCTTAAATCGAAGTTTAGAGATATTAGGACCTTTGAGATTCTCCTACGCACGTATGAAGTTAGAGAAGGAACATCCGATCGCAATCAACCCAACGGGCCCTGTTCTACAGGTCTTGTTCCATGCAAGAGGCGGCGGCAAAGATCAAACGAGGCAGTCGAAATGATTCCGGCTCCTTTCATGGCTTCCATCGCCGTTAGTACCTGCTACCTCCCTTCTCTCCGTCTCCGATCACGAACTCCGAATTTAGTTTCCAGTTCTCGATCCAGATTGTCTCTTCGCAGTAGTATCTCCGATTACGCTGCTTCTGATGGCGGGTTTAGAACGGGCGATGGAATTGGATTGGTTCGTTTAAACCATTGGAAGTTATCCAAAGGAGCTTACGATTGTAGAATTACTCGTGGAAATGGTGGTTCTGGAGCTGTCAGAGCTGCTGCTGCGGCTGCTAATGCTTCTTCTTCTTCTTCTTCTTCTTCCCCTGCGTTACCTCAACCTGCTCAGCCATGGCAAGGTGCGGCGATTAAGCCGCTAATCGCTTCACTTGCTACAGGTGTCATTCTCTGGTTTGTTCCGGTGCCCTCCGGTGTTTCTCGTAATGCATGGCAGTTGCTTGCGATTTTCTTGGCCACAATTGTTGGCATTATCACTCAGCCGTTGCCTCTTGGTGCTGTGGCTTTGATGGGATTAGGCGCTTCCGTTCTTACCAAAACCTTAACTTTCTCTGCTGCATTCTCCGCGTTTGGAGATCCGATCCCCTGGCTTATTGCGCTTGCCTTCTTCTTTGCACGAGGCTTTATTAAGACCGGACTTGGTAATAGAATTGCTTATCAATTTGTTTCTCTGTTTGGTAGCTCCTCCTTGGGATTGGGGTACAGTTTAGTGTTCAGTGAGGCTTTGTTGGCACCGGCGATTCCATCGGTCTCAGCTAGAGCTGGAGGAATTTTCCTTCCTCTGGTTAAATCTCTTTGCGTAGCATGCGGTAGCAATGTTGGGGACGGCACAGAGGGTCGACTCGGATCCTGGTTGATGCTTACTTGCTTCCAAACTTCGGTGATTTCATCCTCCATGTTCTTAACAGCTATGGCAGCCAATCCATTGAGTGCAAATTTGACGTTTAATACGATTAAACAAACAATTGGGTGGACAGATTGGGCAAAGGCAGCAATTGTACCTGGAATGATTTCGCTGATTGTAGTGCCATTGCTTCTGTATTTGATTTATCCGCCATCTGTGAAGAGTAGTCCTGATGCTCCCAAGCTTGCGAGGGAGAGGTTGGAGAAGATGGGGCCAATGACCAAAAACGAAATTATAATGGCTATGACACTTCTTCTCACGGTTGGGCTTTGGATTTTCGGAGGGATGCTGGGTGTGGATGCTGTCACTGCTGCGATTTTAGGGCTTTCTGTTCTTCTTGTATCTGGCGTTGTGACCTGGAAGGAGTGCTTGGCCGAATCAGTGGCCTGGGATACATTGACGTGGTTTGCTGCTCTTATTGCTATGGCTGGCTATCTCAACAAGTATGGCCTCATCTCTTGGTTTAGCCAAACAGTTGTCAAGTTTGTAGGAGGACTGGGTCTTTCCTGGCAGGCATCTTTTGGCATTCTAGTTCTTCTCTATTTCTACTCTCACTACTTCTTTGCAAGTGGGGCTGCCCACATTGGCGCCATGTTTACAGCCTTTTTGTCAGTGGCTAGCGCGTTGGGGACTCCACCATACTTTGGAGCTATGGTTCTCTCCTTCCTCTCCAATCTCATGGGCGGTCTAACCCACTACGGCATTGGATCAGCCCCCATCTTCTACGGAGCGAACTACGTGCCCCTCGGAAAATGGTGGGGCTATGGCTTCCTCATATCCGTTGTCAATATCATTATTTGGCTTGGTATTGGCGGAGTTTGGTGGAAGGCCATCGGCTTGTGGTGA 2586 47.41 MADPTKKLSFSRCICDGDLVIVYERHDNMKAIKLCEGSTFQNRFGVFKHCDWIGKPFGSKVFSNKGGFIYLLAPTPELWTLVLSHRTQILYIADISFVIMYMEIVPGCLVLESGTGSGSLTTSLARAVAPTGHVYTFDFHDQRAASAREDFEKIGLSSLVTVGVRDIQGEGFPAELSGAADSVFLDLPQPWLAIPSAEKMLKEDGILCSFSPCIEQVQRSAEALKSKFRDIRTFEILLRTYEVREGTSDRNQPNGPCSTGLVPCKRRRQRSNEAVEMIPAPFMASIAVSTCYLPSLRLRSRTPNLVSSSRSRLSLRSSISDYAASDGGFRTGDGIGLVRLNHWKLSKGAYDCRITRGNGGSGAVRAAAAAANASSSSSSSSPALPQPAQPWQGAAIKPLIASLATGVILWFVPVPSGVSRNAWQLLAIFLATIVGIITQPLPLGAVALMGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTEGRLGSWLMLTCFQTSVISSSMFLTAMAANPLSANLTFNTIKQTIGWTDWAKAAIVPGMISLIVVPLLLYLIYPPSVKSSPDAPKLARERLEKMGPMTKNEIIMAMTLLLTVGLWIFGGMLGVDAVTAAILGLSVLLVSGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQASFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPYFGAMVLSFLSNLMGGLTHYGIGSAPIFYGANYVPLGKWWGYGFLISVVNIIIWLGIGGVWWKAIGLW 861
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 35912334 35917005 + BLOR12157 Blo03g00976 58440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00976 861 Pfam tRNA methyltransferase complex GCD14 subunit 67 248 IPR014816 GO:0016429|GO:0030488|GO:0031515
Blo03g00976 861 ProSiteProfiles tRNA (adenine(57)-N(1)/adenine(58)-N(1) or adenine(58)-N(1)) (EC 2.1.1.219 or EC 2.1.1.220) family profile. 17 299 IPR014816 GO:0016429|GO:0030488|GO:0031515
Blo03g00976 861 CDD ArsB_NhaD_permease 433 855 - -
Blo03g00976 861 CDD AdoMet_MTases 110 207 - -
Blo03g00976 861 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 363 861 - -
Blo03g00976 861 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 363 861 IPR030676 -
Blo03g00976 861 Gene3D - 8 75 - -
Blo03g00976 861 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 244 IPR029063 -
Blo03g00976 861 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 413 855 IPR001898 GO:0016020|GO:0022857|GO:0055085
Blo03g00976 861 Pfam Sodium:sulfate symporter transmembrane region 398 861 IPR001898 GO:0016020|GO:0022857|GO:0055085
Blo03g00976 861 Gene3D Vaccinia Virus protein VP39 76 300 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00976 Blo-Chr3:35912334 Blo04g01395 Blo-Chr4:33523976 4.46E-149 dispersed
Blo03g00976 Blo-Chr3:35912334 Blo03g00977 Blo-Chr3:35936683 1.42E-125 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00976 - - csv:101204366 901.738