Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01027 ATGGATCTAGATAGCACCTCATTAGTTGAGGATGCTAATGGTCATACTGATCAATATCCTGGTGGTTTGCCTTCAAATTCACTTCAGTTACTTGACATTTCACAGAATCCTAAGAATGAAAGAGAAGAATGGGCTGCTACACGAATCCAAACAACCTTTCGAGGATTTCTGGCTAGGAGAGCTCTCCGAGCTTTGAAAGGATTAGTGAGACTTCAAGCTCTTGTCAGGGGTCATGCTGTCAGAAAGCAAGCTGCAATAACACTTCGATGTATGCAAGCTTTAGTGAGAGTTCAGGCTCGGGTCAGAGCAAGGCGCGTTCGTCTTGCATTAGAAAGCGAAACATCTCAACAAAAGTTTCAACAACAACTCGAAAATCAGGCTCGTGTTAGAGAAATAGAGGAAGGGTGGTGTGACAGTGTAGGATCTGTTGAAGAAATTCAAGCCAAGTTGTTGAAGAGGCAGGAGGCTGCAGCCAAGCGTGAGAGAGCCATGGCATATGCTCTGGCTCATCAGTGGCAAGCAGGATCAAGACAGCAAACCACTCCATCAGGGTTCGAACCGGATAAGAGCAGCTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTCCGTCCTTGGGAGAATCGTTTTCTTGACATTAATCTCCGAGATGGAGTGATGATGCAAGAGAATGAATCGGCTGAGGCTAGAAATAGTAGTGGATCTCAGTCAAAAGCTAGTGGAAAGAAGCCTAATGTTTCAGTTGCTCAATCTAATCTCTCAAACCAGAAAACCGCCCCTTCTAATTCCGAGGTCTCTGATTCTTCTCCCACTAAATCAGCAGGCTTGCTCGAGTCCATGGCGACCCAGAAGCCAAAGTCTAAGCCTTCTTATAAAAAGACACCTGAAGAAGTAAAAAAACCAGTTGTTGGATCAAGATCTCTGAGCAATCCAAACGAGCCGTCGACTTCGTTAGATAAACCTGCAAAAAAGCGGTTATCTCTGCCTAATACTGGAACTTGTAGCTCTCTTTCAATGAGGAATTCCAGCCGACATAGAGGAAAATCGAGCACCGGTTCTCTCAAGCCCGTCAAAGATAACTCTAAGCTCGACGGAAAAGATGAAGAAAAACACGGTAAAATCCTTCTCACTAGCTATTGA 1140 44.91 MDLDSTSLVEDANGHTDQYPGGLPSNSLQLLDISQNPKNEREEWAATRIQTTFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLALESETSQQKFQQQLENQARVREIEEGWCDSVGSVEEIQAKLLKRQEAAAKRERAMAYALAHQWQAGSRQQTTPSGFEPDKSSWGWNWLERWMAVRPWENRFLDINLRDGVMMQENESAEARNSSGSQSKASGKKPNVSVAQSNLSNQKTAPSNSEVSDSSPTKSAGLLESMATQKPKSKPSYKKTPEEVKKPVVGSRSLSNPNEPSTSLDKPAKKRLSLPNTGTCSSLSMRNSSRHRGKSSTGSLKPVKDNSKLDGKDEEKHGKILLTSY 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 36556078 36559433 + BLOR12208 Blo03g01027 58491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01027 379 MobiDBLite consensus disorder prediction 225 288 - -
Blo03g01027 379 MobiDBLite consensus disorder prediction 328 357 - -
Blo03g01027 379 Pfam IQ calmodulin-binding motif 44 63 IPR000048 GO:0005515
Blo03g01027 379 Gene3D - 39 86 - -
Blo03g01027 379 SMART iq_5 64 85 IPR000048 GO:0005515
Blo03g01027 379 SMART iq_5 41 63 IPR000048 GO:0005515
Blo03g01027 379 MobiDBLite consensus disorder prediction 359 379 - -
Blo03g01027 379 MobiDBLite consensus disorder prediction 1 27 - -
Blo03g01027 379 PANTHER IQ-DOMAIN 5-RELATED 9 334 - -
Blo03g01027 379 ProSiteProfiles IQ motif profile. 42 70 IPR000048 GO:0005515
Blo03g01027 379 PANTHER IQ-DOMAIN 5-RELATED 9 334 - -
Blo03g01027 379 MobiDBLite consensus disorder prediction 224 379 - -
Blo03g01027 379 ProSiteProfiles IQ motif profile. 66 93 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01027 Blo-Chr3:36556078 Blo18g00281 Blo-Chr18:2953121 1.13E-45 dispersed
Blo13g00915 Blo-Chr13:31675462 Blo03g01027 Blo-Chr3:36556078 2.57E-13 dispersed
Blo03g01027 Blo-Chr3:36556078 Blo01g01460 Blo-Chr1:53769300 1.22E-57 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01027 - - pvy:116141055 423.32