Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01051 ATGAATAAAGTTCCTCTAGAAAAGCTGAAGATTTTAAGACTTTTCTTTTGTTTTCGGAAGAAACTTTGCTGGTTTTTTCTATTTCCTGTTGTTTTATCTGCTAGTAATGAGGGGCCAAGTTTTGATTTTGGAGAGCTGGAAGAAGCAATTGTTCTGCAGGGAGTTGGGTTGAGAAATGATGAAGCCAGAGCAGCGCTTTTCACCGGAAAGCCAGCTACTTTGGAAATTTTCCCTTCCTGGCCTGGGAGTTCAAAGTTAGGAGGAGAGAGCAGTGATTCGGGATCAGCTATGAACAAGCTCGCTGCAAGCAAAGCTGAGGGCTACTCAGAACAAGAATCTCCGATGAGCAAAAAGTCGTCTTCCTCTTCAGATAATCAGGGTTTTGATCAGAATATTGATCTGCGATCTCAACTGCCAGAAAAGACGTCGAGGCGTTTGGCTCAAAACAGAGCAGCAGCGAAAAAGAGTCGTCTCAGAAAGAAGGTTTACATACAGCAGCTGGAAGCAAGTAGAACGAAGCTTTCTCAGATTGAACAAGTGCTCCAACGATCTCACTCTCAGGGATTGTTCTCTGCTTCTTCTTCTACTGCTGCCCCCATCAGCTCCGGAGGTGTAGTTTTCGACATGGAATATACGAGATGGCTAGAGGACGATCAGCGGCAGATGACTGAGCTAAGATCGGGTTTGGAGGCGCATTTATCAGACGATGATCTCCGATCAACAGTGGATGAGTACATTTCTCATTACGATGAAATTTTTCGTCTAAAAGGGGTGGTAGCCAAATCCGACGTCTTCCATTTGATCACCGGAACATGGATAACTACAGCCGAGCGATGTTTTCTCTGGATGGGTGGCTTTAGACCCTCTGAACTCATCAAGATTTTAATATCACAACTAGACCCACTAAGCGAACAGCAAGCCATGGGAATATATAAGCTGCAAAACTCTACACAACAGGCAGAGGAGGCTCTATCCCAAGGCCAAGAACAACTCCAGCAATCTCTGCTAGACACCATAGCCGGTGGGCCGATCATCAACGGCATGAACCAGATGTTGGTGGCCGTTGCCAAGCTTTCCAATCTCGAAGGTTTCGTTCGACAGTCGCATAGTCTTCGCTGTACTGAATCTTTTATGAGAGAAAATGTTGTTCAGGTGCAGCAACAAATGGAGCCCATCGATGAAACCAAGCACAAAATGTTAGACATCTGGAAGAGGTTTCATTTCGATTCGGAAGATGAAATGGACAGTTTCAGTGATGATGTTTATAGAGATGGCGATGGCAATTTATCGGAAGAGGATGAATCTTTGTCTGATATTTCTCCTCACAAGTTGAATAAAGCATCTGATCTCAACAGGGAATGGCAAACGAGACGCGACCAATTTTATACGATTGGATACCGAGACGGGTTGATAGCAGGCAAAGATGCTTCGGCACAAGAGGGATTCATTGTTGGCTTTAAGCAATCGGTCTTTGTCGGGTATGAGTGGGGGATCGTTAGAGGCCTATCGAGTGTAGTAGCTTGCCTTCTGGATGAGATAAAGGAGATGTTGATTAAATCGCGAGCGGAGAGAGATTCATTTCATGGCTTGTTCGAATCTGTGCATTCGCTTTCTGCATCAGACGCACTAAGGCTGTTAAACCAAGATGTAAACGAGACAGCGAAACAAAACATCACGGCTGAAACTAGCTACGATGAACCGAATTATCCGGAGCAAAATTTTGATTTGAGTCTCGTGGGGAAGTGCATTGGAGAGCTTCAGATGCTTCTATCGGATTACCCTTCGATCGATGTTCATTTCTCAGGATATCAGTAA 1815 44.74 MNKVPLEKLKILRLFFCFRKKLCWFFLFPVVLSASNEGPSFDFGELEEAIVLQGVGLRNDEARAALFTGKPATLEIFPSWPGSSKLGGESSDSGSAMNKLAASKAEGYSEQESPMSKKSSSSSDNQGFDQNIDLRSQLPEKTSRRLAQNRAAAKKSRLRKKVYIQQLEASRTKLSQIEQVLQRSHSQGLFSASSSTAAPISSGGVVFDMEYTRWLEDDQRQMTELRSGLEAHLSDDDLRSTVDEYISHYDEIFRLKGVVAKSDVFHLITGTWITTAERCFLWMGGFRPSELIKILISQLDPLSEQQAMGIYKLQNSTQQAEEALSQGQEQLQQSLLDTIAGGPIINGMNQMLVAVAKLSNLEGFVRQSHSLRCTESFMRENVVQVQQQMEPIDETKHKMLDIWKRFHFDSEDEMDSFSDDVYRDGDGNLSEEDESLSDISPHKLNKASDLNREWQTRRDQFYTIGYRDGLIAGKDASAQEGFIVGFKQSVFVGYEWGIVRGLSSVVACLLDEIKEMLIKSRAERDSFHGLFESVHSLSASDALRLLNQDVNETAKQNITAETSYDEPNYPEQNFDLSLVGKCIGELQMLLSDYPSIDVHFSGYQ 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 36835921 36847019 + BLOR12232 Blo03g01051 58515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01051 604 PANTHER TRANSCRIPTION FACTOR TGA9 58 373 - -
Blo03g01051 604 SUPERFAMILY Leucine zipper domain 141 183 IPR046347 GO:0003700|GO:0006355
Blo03g01051 604 Gene3D - 140 188 - -
Blo03g01051 604 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 139 183 IPR004827 GO:0003700|GO:0006355
Blo03g01051 604 MobiDBLite consensus disorder prediction 417 438 - -
Blo03g01051 604 MobiDBLite consensus disorder prediction 420 438 - -
Blo03g01051 604 ProSiteProfiles DOG1 domain profile. 204 412 IPR025422 GO:0006351|GO:0043565
Blo03g01051 604 MobiDBLite consensus disorder prediction 84 98 - -
Blo03g01051 604 PANTHER TRANSCRIPTION FACTOR TGA2-LIKE ISOFORM X1 58 373 - -
Blo03g01051 604 Pfam Seed dormancy control 221 296 IPR025422 GO:0006351|GO:0043565
Blo03g01051 604 Pfam Essential protein Yae1, N terminal 465 502 IPR019191 -
Blo03g01051 604 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 144 159 IPR004827 GO:0003700|GO:0006355
Blo03g01051 604 MobiDBLite consensus disorder prediction 83 130 - -
Blo03g01051 604 MobiDBLite consensus disorder prediction 109 130 - -
Blo03g01051 604 Pfam bZIP transcription factor 141 175 IPR004827 GO:0003700|GO:0006355
Blo03g01051 604 SMART brlzneu 137 202 IPR004827 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01051 Blo14g00231 CCT
Blo03g01051 Blo08g00044 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01051 Blo-Chr3:36835921 Blo14g00231 Blo-Chr14:2035758 7.10E-101 dispersed
Blo12g00743 Blo-Chr12:25779058 Blo03g01051 Blo-Chr3:36835921 2.38E-11 dispersed
Blo13g00631 Blo-Chr13:28844703 Blo03g01051 Blo-Chr3:36835921 1.75E-97 transposed
Blo13g00633 Blo-Chr13:28864422 Blo03g01051 Blo-Chr3:36835921 2.77E-22 transposed
Blo14g00230 Blo-Chr14:2034499 Blo03g01051 Blo-Chr3:36835921 2.93E-30 wgd
Blo03g01051 Blo-Chr3:36835921 Blo08g00044 Blo-Chr8:391298 6.84E-106 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12155 PF14144 DOG1 2.00E-30 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01051 K14431 - pop:7460056 397.127