Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01060 ATGACTGAACCGCCATTCAGACCTCGAGAGAAGCTGATCGAGAAACAGAAATATTTCCAGAGCATTCAGAAACATACGTATCTGAAAGGACCGTTCGACAAGGTCACATCGGTTGCCATTCCCATGGCATTGGCAGCTTCATCCATATTTCTCATTGTTTCCCACCATCACAAATATATAATTCAGTCATCTCTGTCCTCTTCTTGTTTCCCACCGAATTTCGGCGAGAAAGAGATGGAGTTGAACGATGACACTGATACGCAGGGAGCTCAAAGCCCTAACAACGGAAGAGAAAAGCCGCAGGTCGTCGTGATAATGGGTCCCACTGGTTCAGGGAAGTCCCGCCTCGCTATCGATTTAGCTTCCCACTTCCCTGTCGAGATCATCAACGCCGACTCCATGCAGGTCTATAGTGGTCTCGACGTTCTCACCAATAAGGTTCCCGTATCTGACCGAAAGGGAGTCCCTCATCATTTACTGGGAACAGTTGATACCAACGTAGAGTTCACAGCAAAAGAGTTTCGTGATTGTGCAATTCCTATCATTGAAGACATATTATTTCGCAATTGCCTGCCAGTCATAGTTGGGGGTACAAATTACTATATCCAGGCAAGGAGCTGTTTTTCGTTTGACAGTTGTATTTCAATCTTATTCCCATGTTCGGTTGAATGTTATATTATATCACTACTTTTACCTGATGCTCTTGTTGGCTCATTTCTTCTAGATGATTCAGCAGAAGATGTGGATGGAACCTGCTCAAATGATCTTGGTGACGAAGAGCTCGATAAATATTTGAATTTTGGACAAGACAGTTTCAGCTTTAGCTATAATGATCTTAAAGAGATTGATCCAATCACTGCAAATAGGATCCATCCCAATGACAAAAGAAAAATTAGTCAACACCTAAGTTTGTATTACCGTTATGGTGTTCTTCCCAGCAAAATATTTCAGGGAAAGGCTGCGGAGAATTGGGGTCGACCGGATTGTTTCCGATACAATTCTTGTTTTATAAGTGTGGAAGTATCTCTCGCTGTACTGGACCAACATGTGAATCAGAGAGTGGATGACATGGTAGCTACTGGATTACTTAATGAAGTCTTTGACATTTATAATCTTAATTCAGATTATAGTCGAGGTTTGCTGCAAGCCATCGGAGTCCGAGAATTCGAAGAGTTTTTGAAACATTATATATTGGAAGGTAGATGCAGTGGAGAAACTGAATTAACCGATGAGTCGATGGATGAGAGGCATAAAATTTTGAAAGAGAAAATGATAGTACTCCTCACTTCATCGGCTGACAACTATTCCCAATTCCTCTTAAAAGATGCTCTAGCCAAAGTAAAGTTGAACACCAGAAGACTTGCTCGTCGGCAGAGGAGGAGGCTGAATAGACTACAGACATTATTTGGGTGGAACATACATTCCATTGATGCCACAGAATCAATAGCATGCAAATCAGATCATTCGTGGACTACGCAAGTTCTTGAGCCTGCCATTGAAATAATCAGATCATTCCTCGATAAGAACACCCAATCAGTGACTGACCTGGGGGTCCCAGATACTCCTGCTGTGAAAACTATCCAACGAGACTTGTGGACTCAGTATTCGTGCAAGTTTAAGGAAGATGTGGAGGTTGAAGAGATTCTTAAAGGGATGGAGAAGCTGGTTTCAGACATTGATGAAGTTAAATCTTTTGAATGGGGAAAAGACATGGAAGGAGAAGAGATGCTGAGGCAAGGGTTTAGCTACGTATTCTTGATGACGTTTGAGAAGAAGGAAGATTTCATGGAGTTTGTTGGCCATCCTAAGCATGTCGAATTCGCTGCTACATTTTCTGCAGCAATTGAGAGGACGGTTCTCCTCGATTTCACTTCTGTTTTTCTCAAGCCGGCAGCCGCAGCGGCTGTGGTGGAGGAAACGCCACCTGTTCTGCCACCGGAGCAGCCGCTGGAGGTGGCGGCGCCAGAAGCAGAACCGGCAGTGGCATAG 1989 43.64 MTEPPFRPREKLIEKQKYFQSIQKHTYLKGPFDKVTSVAIPMALAASSIFLIVSHHHKYIIQSSLSSSCFPPNFGEKEMELNDDTDTQGAQSPNNGREKPQVVVIMGPTGSGKSRLAIDLASHFPVEIINADSMQVYSGLDVLTNKVPVSDRKGVPHHLLGTVDTNVEFTAKEFRDCAIPIIEDILFRNCLPVIVGGTNYYIQARSCFSFDSCISILFPCSVECYIISLLLPDALVGSFLLDDSAEDVDGTCSNDLGDEELDKYLNFGQDSFSFSYNDLKEIDPITANRIHPNDKRKISQHLSLYYRYGVLPSKIFQGKAAENWGRPDCFRYNSCFISVEVSLAVLDQHVNQRVDDMVATGLLNEVFDIYNLNSDYSRGLLQAIGVREFEEFLKHYILEGRCSGETELTDESMDERHKILKEKMIVLLTSSADNYSQFLLKDALAKVKLNTRRLARRQRRRLNRLQTLFGWNIHSIDATESIACKSDHSWTTQVLEPAIEIIRSFLDKNTQSVTDLGVPDTPAVKTIQRDLWTQYSCKFKEDVEVEEILKGMEKLVSDIDEVKSFEWGKDMEGEEMLRQGFSYVFLMTFEKKEDFMEFVGHPKHVEFAATFSAAIERTVLLDFTSVFLKPAAAAAVVEETPPVLPPEQPLEVAAPEAEPAVA 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 36970866 36979873 + BLOR12241 Blo03g01060 58524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01060 662 Hamap tRNA dimethylallyltransferase [miaA]. 102 507 IPR018022 GO:0008033
Blo03g01060 662 Pfam Cytochrome c oxidase subunit VII 10 53 IPR039297 -
Blo03g01060 662 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 98 510 IPR039657 -
Blo03g01060 662 Pfam IPP transferase 135 460 - -
Blo03g01060 662 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 98 510 - -
Blo03g01060 662 Pfam Stress responsive A/B Barrel Domain 538 624 IPR013097 -
Blo03g01060 662 Gene3D - 535 635 - -
Blo03g01060 662 SUPERFAMILY Dimeric alpha+beta barrel 537 625 IPR011008 -
Blo03g01060 662 ProSiteProfiles Stress-response A/B barrel domain profile. 527 623 IPR013097 -
Blo03g01060 662 SMART Dabb_2 538 625 IPR013097 -
Blo03g01060 662 Gene3D - 100 519 IPR027417 -
Blo03g01060 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 206 IPR027417 -
Blo03g01060 662 MobiDBLite consensus disorder prediction 76 99 - -
Blo03g01060 662 Gene3D - 257 319 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01060 Blo-Chr3:36970866 Blo07g00204 Blo-Chr7:2583703 3.64E-21 dispersed
Blo03g01060 Blo-Chr3:36970866 Blo03g01314 Blo-Chr3:39481825 6.62E-27 wgd
Blo03g01060 Blo-Chr3:36970866 Blo08g00037 Blo-Chr8:321632 2.05E-33 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01060 K00791 - qsu:111983693 539.65