Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01067 ATGCCCCGACGTGGAGGCGGCCGTCGAGGAGGTGATCCCCGTCGGGATCAACCGTCTTCTGAGATGAATAGGCCCGCCGATCAGAGAGGTGGAAGTGGAGGCAATGTCGGAGGATACGTCCCCAGTCGTGGTGCTTCTTCTTCTGGTCAGCGTGGCGCTTCTTCTTCTGGTCAGCGTGGTGCTTCTTCTTCTGGTCAGCGTGGTGCTTCTTCTTCTGGTCAGCGTGGTGCTTCTTCTTCTGGTCAGCGTGGTGGAAGTGGAAGCATGGGTGGAAGAACTGCGGGTCGTAGTGGTGGGAGTGATGTGAGACAACCTTCTCAATCGTATGTTGTTGAGGCTTCTAAGGAACCTCCCACTGTGGCTGCGTCAACATCTGAAGCTTCTTCTTCCCGTTCGCGAACGTCCACGGATCCGGCTGAAATGGAGTCGTTGACTAAAGAAGTTGAAAAGGCTACATTGCAGCCGGCTCCACCACCTCCGGTTTCTTCCAAGGCTCTGAGTCTTCCGAGAAGACCCGGATTCGGTACCGTCGGCAAAAGGATAGTTGTTCGAGCGAATCATTTTCTCGTGGAGGTTTCAGACAAAGATATCCATCATTACGACGTGTCAATAAAACCAGAAATCACATCGAAGAAGGTTTGCAGAGATGTGATTAAGCAGCTCGAAGATCTATACAAGGAATCACACTTAAATAAAAGAATGCTGGCTTACGATGGAAGCAAAAACCTATATGTTGCTGGGGCACTTCCATTTGTTTCTAAGGAGTTCGTCATTGAGTTACCTGACAATCGATCGGAAACTTCTACTTCGACAAGAAGACCACGCTCATTTACCGTGACTATTAACTTTGCGGCAAGACCTGATATCCATCATCTCCAACAGTTTATTCATGGCAGACAGTTGGATGTTCCACAGGATACAATCCAAATGTTTGATGTTGTCCTAAGAGCATCACCATCCGCACGCTATACAGTTGTTGGCCGATCCTTTTTCTCATTGAACTTGGGACCTAAGGGAGAACTTGGGGATGGAGTGGAATATTGGAAGGGATATTATCAAAGCCTTCGACCAACCCAGATGGGACTGTCCCTGAACATAGATGTCTCGGCACGATCCTTCTATGAGGAAATCCGAGTGACTGAGTTTGTTGCAAAATATATGAATCTTAGAGATTTTTCAAGGCCATTATCTGACCAAGACCGTGTTAAGGTTAAAAAAGTTCTGAGAGGAATTAAGGTGCGAATCCTGTACAGCGAACAGGCACGGACGTACAAGATTACTGGTATTTCAACACAACCCATGAGCCAACTTGGGTTTCCTCTTGGTGAGGACATAAAAAAGACATCAGTTTTGCAATACTTCCGAGATAAATATGGCATTGCCTTGAAATGTACTAATTTGCCAGCATTGCAAGCTGGAAATGATCCATCAAAGCCTACTTATTTGCCTATGGAGCTATGTCAGATTGTTGGTGGGCAAAGATATACTAAAAAGTTAAATGAACAACAAGTTACTGCTCTTTTAAGAGCAACATGTCAACGCCCACCACAACGGGAAGAGAGTATAAAGAAGATGCTTCAGAACAATGCGTATGGAAACGATAAGCTTGTAAATAAGGAGTTCGAGATCAAAGTGAGTGCGAACCTTATTTCCGTAGATGCCCGTGTCCTACCTCCTCCAATGCTTAAATATCATGATACAGGCAAAGAAACACGAGTAGACCCTAAGATGGGACAATGGAATATGATCAACAAGAAAATGGTAAACGGCGGTAGAGTAGATTGGTGGACTTGTGTAAACTTTTCTTCCCGTATACATAGAGACTTGCCATACGATTTCTGTTATCAATTGATGGGGATGTGCAATAGTAAAGGCATGACTTTCAACCCAGAGCCGTTGATTCCAATAACATCTGCCCCATCTTCTCATATCGAAAGGACACTTGTAGAAGTTCACAAAAAATCACAAGAGAGTCTGAAAAATATGAAGCGGGATGATGATCGTTTACAATTGTTAATTATTATTTTACCTGATTTTAAAGGATCATATGGAAAGATAAAGCGTGTGTGCGAAACTGAACTCGGAATAGTTTCTCAGTGTTGTCAACCAAAGCAAGCCGCAAGGATGAATGTACAGTATTTTGAAAATGTTGCACTTAAAATCAATGTGAAGGTGGGAGGAAGAAATACTGTATTAAATGACGCAATTCTCAGAAAAATTCCCTTAGTTACTGATAAGCCGACAATTATCTTTGGTGCTGATGTGACACATCCCTCGCCCGGGGAAGACTCAAGCCCGTCGATAGCAGCTGTGGTTGCCTCCATGGATTGGCCGGAAGTTACCAAGTATAAAGGACTTATTTCTTCTCAATCGCATCGGGAAGAAATTATTCAAGATCTATACAAGTTAGTCCAAGATCCCCAAAGAGGATTGGTGCATGGTGGAATGATCAAGGAACTTTTAGTCTCATTTTTTAAATCTACTCGTTACAAACCCCACAGAATTATATTTTACAGAGATGGAGTAAGTGAAGGTCAATACAACCAGGTTTTGTTATATGAGATGGATGCCATCCGAAAGGCATGTAACTCACTAGAGGCAGGATATCTACCTCCAGTCACTTTTATTGTGGTGCAAAAGAGACATCACACACGACTATTTCCTGCTGATAATCGCAACATGGATCGAAGTGGAAATATAGAACCAGGCACTGTCGTAGATAGACAAATTTGTCATCCCACGGAATTTGATTTTTACCTCAACAGCCATGCCGGGATTCAGGGAACAAGCCGACCTGCACATTATCATGTGTTGTTTGATGAGAATAACTTTACTGCAGACTCGCTGCAATTGCTAACTAATAACTTGTGTTACACGTATGCGAGGTGCACCAAGTCTGTGTCTATAGTGCCTCCTGTGTATTACGCACATTTAGCCGCATTCAGAGCTCGATATTACATAGAAGAAGATTTATCAGAAAGTGGCTCGACAAGCCAAGGCATGACTCGGGAGAAAAGTAAACCTAGTTTAGTCAGACCCGTTTGTGGACCCACAGAACTCCAGCCTGCAACTGTGTATCCTAATTCCTACGATGACTTGTCAATTCTTACCAATGATGCCCTCTTCCCTGTCACTCCAGTGTTACTGTCTTAG 3153 43.8 MPRRGGGRRGGDPRRDQPSSEMNRPADQRGGSGGNVGGYVPSRGASSSGQRGASSSGQRGASSSGQRGASSSGQRGASSSGQRGGSGSMGGRTAGRSGGSDVRQPSQSYVVEASKEPPTVAASTSEASSSRSRTSTDPAEMESLTKEVEKATLQPAPPPPVSSKALSLPRRPGFGTVGKRIVVRANHFLVEVSDKDIHHYDVSIKPEITSKKVCRDVIKQLEDLYKESHLNKRMLAYDGSKNLYVAGALPFVSKEFVIELPDNRSETSTSTRRPRSFTVTINFAARPDIHHLQQFIHGRQLDVPQDTIQMFDVVLRASPSARYTVVGRSFFSLNLGPKGELGDGVEYWKGYYQSLRPTQMGLSLNIDVSARSFYEEIRVTEFVAKYMNLRDFSRPLSDQDRVKVKKVLRGIKVRILYSEQARTYKITGISTQPMSQLGFPLGEDIKKTSVLQYFRDKYGIALKCTNLPALQAGNDPSKPTYLPMELCQIVGGQRYTKKLNEQQVTALLRATCQRPPQREESIKKMLQNNAYGNDKLVNKEFEIKVSANLISVDARVLPPPMLKYHDTGKETRVDPKMGQWNMINKKMVNGGRVDWWTCVNFSSRIHRDLPYDFCYQLMGMCNSKGMTFNPEPLIPITSAPSSHIERTLVEVHKKSQESLKNMKRDDDRLQLLIIILPDFKGSYGKIKRVCETELGIVSQCCQPKQAARMNVQYFENVALKINVKVGGRNTVLNDAILRKIPLVTDKPTIIFGADVTHPSPGEDSSPSIAAVVASMDWPEVTKYKGLISSQSHREEIIQDLYKLVQDPQRGLVHGGMIKELLVSFFKSTRYKPHRIIFYRDGVSEGQYNQVLLYEMDAIRKACNSLEAGYLPPVTFIVVQKRHHTRLFPADNRNMDRSGNIEPGTVVDRQICHPTEFDFYLNSHAGIQGTSRPAHYHVLFDENNFTADSLQLLTNNLCYTYARCTKSVSIVPPVYYAHLAAFRARYYIEEDLSESGSTSQGMTREKSKPSLVRPVCGPTELQPATVYPNSYDDLSILTNDALFPVTPVLLS 1050
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 37048208 37054247 - BLOR12248 Blo03g01067 58531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01067 1050 Gene3D paz domain 371 495 - -
Blo03g01067 1050 MobiDBLite consensus disorder prediction 41 87 - -
Blo03g01067 1050 MobiDBLite consensus disorder prediction 1 170 - -
Blo03g01067 1050 PANTHER ARGONAUTE1 76 1009 - -
Blo03g01067 1050 SMART PAZ_2_a_3 381 511 IPR003100 GO:0005515
Blo03g01067 1050 SMART Piwi_a_2 671 988 IPR003165 GO:0003676
Blo03g01067 1050 Pfam Mid domain of argonaute 575 653 IPR032473 -
Blo03g01067 1050 ProSiteProfiles Piwi domain profile. 671 988 IPR003165 GO:0003676
Blo03g01067 1050 Pfam Piwi domain 673 987 IPR003165 GO:0003676
Blo03g01067 1050 SUPERFAMILY Ribonuclease H-like 659 989 IPR012337 -
Blo03g01067 1050 MobiDBLite consensus disorder prediction 1 22 - -
Blo03g01067 1050 CDD PAZ_argonaute_like 376 490 - -
Blo03g01067 1050 SUPERFAMILY PAZ domain 181 530 IPR036085 GO:0005515
Blo03g01067 1050 Gene3D - 556 734 - -
Blo03g01067 1050 Gene3D - 740 1016 IPR036397 GO:0003676
Blo03g01067 1050 MobiDBLite consensus disorder prediction 99 139 - -
Blo03g01067 1050 MobiDBLite consensus disorder prediction 994 1013 - -
Blo03g01067 1050 Pfam PAZ domain 401 507 IPR003100 GO:0005515
Blo03g01067 1050 CDD Piwi_ago-like 539 987 IPR045246 -
Blo03g01067 1050 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 76 1009 - -
Blo03g01067 1050 ProSiteProfiles PAZ domain profile. 377 491 IPR003100 GO:0005515
Blo03g01067 1050 SMART DUF1785_2 324 376 IPR014811 -
Blo03g01067 1050 Pfam Argonaute linker 1 domain 326 375 IPR014811 -
Blo03g01067 1050 Pfam N-terminal domain of argonaute 179 315 IPR032474 -
Blo03g01067 1050 Pfam Argonaute linker 2 domain 517 564 IPR032472 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01067 Blo08g00144 CCT
Blo03g01067 Blo14g00312 CCT
Blo03g01067 Blo08g00144 ECH
Blo03g01067 Blo14g00312 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01067 Blo-Chr3:37048208 Blo13g00109 Blo-Chr13:2042432 0 dispersed
Blo03g01067 Blo-Chr3:37048208 Blo07g00235 Blo-Chr7:2953226 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01067 K11593 - pop:7472995 1243.41