Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01072 ATGGGCCAGATTCAGTATTCCGAGAAGTATTTCGATGACACAAACGAGTACAGACATGTCGTGCTTCCGCCTGAGGTGGCCAAATTGCTTCCAAAGAATCGTCTTCTTACCGAAAATGAATGGCGAGCAATCGGGGTTCAGCAGAGCCTTGGGTGGGTGCACTACGCGATTCATCGTCCTGAGCCACACATCATGTTATTCAGGAGGCCATTGAACAACCAACAACAGCATAATAATCACCCTCGGGGAAGAGACGCTGCTAAATTTATGGCGTTGCTTGTCTCTTCTTGCGCATCTGCTTTACCGTCTTCTCCGCTGCCGACTTCTAAACAGTTTCTCAGAACAATTTCACCCCTAATCACCATTAATTGTTCATTCTCAAGAACTGCGGTGAGTTCTACTCATAGAGGTTTAGCTCCTCTTCGGGTAGCGTCCCCTCCGACTTCACCTTCGACCTCGGAACTTGAGCCGTATACGCAGTCGGATCAGATTCGAGAAGTGGAGGATGAATCGCAAGAAGCGAGCTCGTCTTCCAAGTTCTCTTGGAGGGATCAGTGGTATCCCGTTTCGTTGATTGAAGATTTGGACTCTTCTCTGCCAACGCCTTTTCAACTTTTGGGCAGAGACATCGTTCTCTGGTTTGATAAATCAAAAGGCGAATGGGTTGCTTTCGATGATAGATGTCCTCACCGGCTTGCCCCCTTATCTGAAGGGAGGATAGATGAAGATGGAAACTTACAGTGCTCGTACCACGGTTGGTCTTTTAATGGGAGTGGATCCTGTGTTAGAATACCTCAGGCATCTTCTGAAGGTCCTGAAGCTAGAGCTCTTAAATCCCCAAGAGCATGCGCTAAAAGATTCCCTACATTGGTTTCTCAAGGCCTGCTCTTTGTTTGGCCAGATGAGAATGGTTGGGAAAGAGCTAATGCTACCAAACCTTATAGGCTACCAGATGATTTTGATAAACCTGAGTTTTCATCAGTAACAATTCAGCGGGATCTATTCTACGGCTATGATACTCTCATGGAAAATGTTTCAGATCCGTCCCACATTGATTTTGCTCATCACAAGGTAACCGGACGTAGAGACAGAGCAAAGCCTCTGCCATTTAAGTTGGAGGGTAGTGGTCCATGTGGTTTTGCGGGAGCAAATGAGGGTAACCCACGAATCAGTGCAGAGTTTATAGCACCATGTTACTATATCAACAAAATAGAGATTGACACAAAGCTTCCAATTACCGGTGACCAAAAATGGGTTATATGGATTTGTTCCTTTAATGTTCCGATGGCCCCTGGAAAGACCCGTTCTATTGTTTGCAGTGCTCGAAACTTCTTTCAATTCACCATGCCTGGACCTGCTTGGTGGCAGCTTATCCCTAGATGGCATGAGCACTGGACTTCAAACAAGGTATATGATGGAGACATGATTGTTCTTCAGGGTCAAGAAAAGATTTTCCTCTCAGAATTTAAAGACAATTATGCAGATGTGAATAAGCAATATAGCAAAATCACATTTACACCAACACAAGCTGATCGACTTGTCTTGGCCTTTCGGAATTGGCTGAGACGGCATGGTAACGGCCAACCCGATTGGTTTCCAACAAGCGGCCAACAACCTCTCCCGTCGACCATCTTGACCAAACGCCAGATGTTGGATAGATTTGAGCAACACACCCTCAAGTGTTCTTCATGTAAAGCAGCATTTTCAACTTTTCAAACTCTGCAAAAGGTTCTTATCGGTGTTACAGTTGTCTGTTCTGCAACTGCTGGGATCCCTTCAGAATTGAACCAGCGAATCCTCTTGGCTGGACTTGCTCTCATCGGTGCTGCCTCTGTTTATGCATTGAACAAACTTGAAAAGAATTTTGTATTTGTTGATTATGTTCATGCAGATATTGATTAA 1902 45.06 MGQIQYSEKYFDDTNEYRHVVLPPEVAKLLPKNRLLTENEWRAIGVQQSLGWVHYAIHRPEPHIMLFRRPLNNQQQHNNHPRGRDAAKFMALLVSSCASALPSSPLPTSKQFLRTISPLITINCSFSRTAVSSTHRGLAPLRVASPPTSPSTSELEPYTQSDQIREVEDESQEASSSSKFSWRDQWYPVSLIEDLDSSLPTPFQLLGRDIVLWFDKSKGEWVAFDDRCPHRLAPLSEGRIDEDGNLQCSYHGWSFNGSGSCVRIPQASSEGPEARALKSPRACAKRFPTLVSQGLLFVWPDENGWERANATKPYRLPDDFDKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLEGSGPCGFAGANEGNPRISAEFIAPCYYINKIEIDTKLPITGDQKWVIWICSFNVPMAPGKTRSIVCSARNFFQFTMPGPAWWQLIPRWHEHWTSNKVYDGDMIVLQGQEKIFLSEFKDNYADVNKQYSKITFTPTQADRLVLAFRNWLRRHGNGQPDWFPTSGQQPLPSTILTKRQMLDRFEQHTLKCSSCKAAFSTFQTLQKVLIGVTVVCSATAGIPSELNQRILLAGLALIGAASVYALNKLEKNFVFVDYVHADID 633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 37121528 37125913 + BLOR12253 Blo03g01072 58536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01072 633 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Blo03g01072 633 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Blo03g01072 633 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Blo03g01072 633 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Blo03g01072 633 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Blo03g01072 633 SUPERFAMILY Cell cycle regulatory proteins 2 78 IPR036858 GO:0016538
Blo03g01072 633 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 125 633 - -
Blo03g01072 633 Pfam Pheophorbide a oxygenase 394 487 IPR013626 GO:0010277
Blo03g01072 633 Pfam Rieske [2Fe-2S] domain 185 268 IPR017941 GO:0051537
Blo03g01072 633 Gene3D - 324 528 - -
Blo03g01072 633 SUPERFAMILY Bet v1-like 293 528 - -
Blo03g01072 633 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 186 298 IPR017941 GO:0051537
Blo03g01072 633 Gene3D - 181 323 IPR036922 GO:0051537
Blo03g01072 633 Gene3D - 1 82 IPR036858 GO:0016538
Blo03g01072 633 MobiDBLite consensus disorder prediction 145 160 - -
Blo03g01072 633 PANTHER PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC 125 633 - -
Blo03g01072 633 MobiDBLite consensus disorder prediction 138 176 - -
Blo03g01072 633 SUPERFAMILY ISP domain 179 303 IPR036922 GO:0051537
Blo03g01072 633 SMART CKS_2 3 72 IPR000789 GO:0016538
Blo03g01072 633 CDD Rieske_RO_Alpha_PaO 169 309 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01072 Blo03g01300 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01424 Blo-Chr1:53038210 Blo03g01072 Blo-Chr3:37121528 9.33E-51 dispersed
Blo03g01072 Blo-Chr3:37121528 Blo03g01409 Blo-Chr3:40663099 4.85E-78 dispersed
Blo12g01041 Blo-Chr12:28255029 Blo03g01072 Blo-Chr3:37121528 6.16E-44 dispersed
Blo03g01072 Blo-Chr3:37121528 Blo03g01300 Blo-Chr3:39330699 3.64E-44 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01072 K13071 - zju:107405855 863.603