Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01076 ATGTTTGATCAGTTCGAAGCTTCTGCAAACCCACTAATGCAGCGCGAAGGTTTTGATGTAGAGCTTAATGATTTCATCGAGGATTCTAACTTCGATCAGTTCGTCGATCTAATCAGGGGAGAAAACGAAAACCCGCTTCTTAATTTCGATCAGGATCTCATCACAAATGGGTGTTTCTTAGATGATCAGTTTGGTTCATCAAACGGAAGAGATGTCTTGGATGTCAATGGCGTTCCTGGATCAGACAGCCCAGAGTTCACGATGTTTGACAGATTGGAGAAGTTTGATGACGGGGAAGTGACCAGAGGAGGTGAAGAAGAAGATGATGATGAAGAGGATTCTTCTGCTACAACTACGACAGGGCCTAATAAAACGACGACGCAGAGGGGTAAGGTTGATAGATCCAGAACTTTGATTTCAGAGAGAAGAAGAAGAGGGAAGATGAAAGAGAAGCTTTATGCATTGCGTGCTTTGGTTCCAAACATAACCAAGATGGATAAAGCCTCCATTGTCGGAGATGCTGTATTATACGTGCAAGAGCTGCAAATGCAGGCGAAAAAACTCAAGGCTGAGATAAAAGGCATGGAAGCGTCGATGGGAAGAGCAGACAGATATCAAGGAGTAACTCAAAACAACCGTAAAAAGATTCATCAACTTCCTAACTCTACCTGCTTAGCTTCAAAGAAAATCATTCAGATGGACATTTTTCAAGTAGAGGAAAGAGGGTTTTACTTGAGAATTGTGTGCGACAAAGGTTATGGAGTCGCCTTGTCTCTTTATAAAGTTCTTGAGTCTATGATGGGTTTTAATTTTCAGAGTTCAAATTTGACGACGACTGCTGAAAGATTTGTTTTAACTGCAACTCTCAATGTAATGAAAGATTGCGAGCAGGAGATGAATTTGCCAAAGTTGAAGCTTTGGTTGACTGAAGCTTTTCTTAGCCATGGATTTGAGTTTAAATCTCCTTTCCCCACTTAA 978 41.21 MFDQFEASANPLMQREGFDVELNDFIEDSNFDQFVDLIRGENENPLLNFDQDLITNGCFLDDQFGSSNGRDVLDVNGVPGSDSPEFTMFDRLEKFDDGEVTRGGEEEDDDEEDSSATTTTGPNKTTTQRGKVDRSRTLISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQELQMQAKKLKAEIKGMEASMGRADRYQGVTQNNRKKIHQLPNSTCLASKKIIQMDIFQVEERGFYLRIVCDKGYGVALSLYKVLESMMGFNFQSSNLTTTAERFVLTATLNVMKDCEQEMNLPKLKLWLTEAFLSHGFEFKSPFPT 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 37143171 37145232 - BLOR12257 Blo03g01076 58540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01076 325 MobiDBLite consensus disorder prediction 129 143 - -
Blo03g01076 325 MobiDBLite consensus disorder prediction 97 143 - -
Blo03g01076 325 Pfam Helix-loop-helix DNA-binding domain 137 182 IPR011598 GO:0046983
Blo03g01076 325 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 132 181 IPR011598 GO:0046983
Blo03g01076 325 PANTHER TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR 92 319 - -
Blo03g01076 325 Coils Coil 178 198 - -
Blo03g01076 325 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 92 319 - -
Blo03g01076 325 Gene3D - 123 198 IPR036638 GO:0046983
Blo03g01076 325 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 133 196 IPR036638 GO:0046983
Blo03g01076 325 SMART finulus 138 187 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01076 Blo08g00021 CCT
Blo03g01076 Blo14g00203 CCT
Blo03g01076 Blo03g01298 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01076 Blo-Chr3:37143171 Blo14g00682 Blo-Chr14:15294811 1.05E-20 dispersed
Blo16g00824 Blo-Chr16:34607059 Blo03g01076 Blo-Chr3:37143171 5.27E-10 transposed
Blo14g00203 Blo-Chr14:1730219 Blo03g01076 Blo-Chr3:37143171 2.39E-103 wgd
Blo03g01076 Blo-Chr3:37143171 Blo03g01298 Blo-Chr3:39310381 2.26E-162 wgd
Blo03g01076 Blo-Chr3:37143171 Blo08g00021 Blo-Chr8:199617 9.68E-102 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12157 PF00010 HLH 1.00E-08 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01076 - - jre:109019270 314.694