Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo03g01076 | ATGTTTGATCAGTTCGAAGCTTCTGCAAACCCACTAATGCAGCGCGAAGGTTTTGATGTAGAGCTTAATGATTTCATCGAGGATTCTAACTTCGATCAGTTCGTCGATCTAATCAGGGGAGAAAACGAAAACCCGCTTCTTAATTTCGATCAGGATCTCATCACAAATGGGTGTTTCTTAGATGATCAGTTTGGTTCATCAAACGGAAGAGATGTCTTGGATGTCAATGGCGTTCCTGGATCAGACAGCCCAGAGTTCACGATGTTTGACAGATTGGAGAAGTTTGATGACGGGGAAGTGACCAGAGGAGGTGAAGAAGAAGATGATGATGAAGAGGATTCTTCTGCTACAACTACGACAGGGCCTAATAAAACGACGACGCAGAGGGGTAAGGTTGATAGATCCAGAACTTTGATTTCAGAGAGAAGAAGAAGAGGGAAGATGAAAGAGAAGCTTTATGCATTGCGTGCTTTGGTTCCAAACATAACCAAGATGGATAAAGCCTCCATTGTCGGAGATGCTGTATTATACGTGCAAGAGCTGCAAATGCAGGCGAAAAAACTCAAGGCTGAGATAAAAGGCATGGAAGCGTCGATGGGAAGAGCAGACAGATATCAAGGAGTAACTCAAAACAACCGTAAAAAGATTCATCAACTTCCTAACTCTACCTGCTTAGCTTCAAAGAAAATCATTCAGATGGACATTTTTCAAGTAGAGGAAAGAGGGTTTTACTTGAGAATTGTGTGCGACAAAGGTTATGGAGTCGCCTTGTCTCTTTATAAAGTTCTTGAGTCTATGATGGGTTTTAATTTTCAGAGTTCAAATTTGACGACGACTGCTGAAAGATTTGTTTTAACTGCAACTCTCAATGTAATGAAAGATTGCGAGCAGGAGATGAATTTGCCAAAGTTGAAGCTTTGGTTGACTGAAGCTTTTCTTAGCCATGGATTTGAGTTTAAATCTCCTTTCCCCACTTAA | 978 | 41.21 | MFDQFEASANPLMQREGFDVELNDFIEDSNFDQFVDLIRGENENPLLNFDQDLITNGCFLDDQFGSSNGRDVLDVNGVPGSDSPEFTMFDRLEKFDDGEVTRGGEEEDDDEEDSSATTTTGPNKTTTQRGKVDRSRTLISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQELQMQAKKLKAEIKGMEASMGRADRYQGVTQNNRKKIHQLPNSTCLASKKIIQMDIFQVEERGFYLRIVCDKGYGVALSLYKVLESMMGFNFQSSNLTTTAERFVLTATLNVMKDCEQEMNLPKLKLWLTEAFLSHGFEFKSPFPT | 325 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 37143171 | 37145232 | - | BLOR12257 | Blo03g01076 | 58540 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo03g01076 | 325 | MobiDBLite | consensus disorder prediction | 129 | 143 | - | - | |
Blo03g01076 | 325 | MobiDBLite | consensus disorder prediction | 97 | 143 | - | - | |
Blo03g01076 | 325 | Pfam | Helix-loop-helix DNA-binding domain | 137 | 182 | IPR011598 | GO:0046983 | |
Blo03g01076 | 325 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 132 | 181 | IPR011598 | GO:0046983 | |
Blo03g01076 | 325 | PANTHER | TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR | 92 | 319 | - | - | |
Blo03g01076 | 325 | Coils | Coil | 178 | 198 | - | - | |
Blo03g01076 | 325 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 92 | 319 | - | - | |
Blo03g01076 | 325 | Gene3D | - | 123 | 198 | IPR036638 | GO:0046983 | |
Blo03g01076 | 325 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 133 | 196 | IPR036638 | GO:0046983 | |
Blo03g01076 | 325 | SMART | finulus | 138 | 187 | IPR011598 | GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo03g01076 | Blo08g00021 | CCT | |
Blo03g01076 | Blo14g00203 | CCT | |
Blo03g01076 | Blo03g01298 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g01076 | Blo-Chr3:37143171 | Blo14g00682 | Blo-Chr14:15294811 | 1.05E-20 | dispersed | |
Blo16g00824 | Blo-Chr16:34607059 | Blo03g01076 | Blo-Chr3:37143171 | 5.27E-10 | transposed | |
Blo14g00203 | Blo-Chr14:1730219 | Blo03g01076 | Blo-Chr3:37143171 | 2.39E-103 | wgd | |
Blo03g01076 | Blo-Chr3:37143171 | Blo03g01298 | Blo-Chr3:39310381 | 2.26E-162 | wgd | |
Blo03g01076 | Blo-Chr3:37143171 | Blo08g00021 | Blo-Chr8:199617 | 9.68E-102 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12157 | PF00010 | HLH | 1.00E-08 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo03g01076 | - | - | jre:109019270 | 314.694 |