Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01079 ATGGAGAAATCTGGGTATGGCCGCGACGGGGTTTACAGGTCTCTCAGACCCGCACTTTCCCTTCCCCAAGACCCTGACATGTCTATGGTCTCTTTCCTCTTCAGAAACTCTTCATCTTACTCGCACAAACCCGCCCTGATCGACGCCGATTCTTCTGAGACCCTCTCATTTTCCCTACTCAAATCCATGGTGATTAAGGTCTCCCATGGCTTACTTCATCTGGGTATTAAGAAGAACGACGTTGTTCTGATTTTCGCTCCCAATTCAATCCAATTTCCGATCTGTTTCCTCGGAATTATAGCTATTGGAGCTATTGCGACCACTTGTAATCCGATTTACACGGTCTCTGAACTGAGAAAGCAAGCTAAAGATTCGAAACCGAAGCTTTTAATCACAGTCGCTGAGTTATGGGACAAAGCGGTGAATTTGAATCTCCCGACAGTGTTACTCGGACCAGAAGGATCATCTCTGCCGTCGGCGAATTTGAAGATACTAAACTTCCACGACTTGGTCCAATCGGGACGGTCGGAGACCCATTTTCCGGCAGTGAAAGTGAAGCAAACGGATACAGCCGTCCTTCTGTACTCATCGGGAACAACAGGTACGAGTAAGGGCGTGATTCTGTCTCACAGAAATTTCATATCGGCGTCTCTAATGATCACACAGGACCAAGAAATGGCAGGAGAAATGCACAACGTTTATCTCAATGTTTTGCCACTTTTCCATGTTTTTGGTCTGTGTTGTGTTACCTTTGCACAGCTTCAGATAGGTAATCCTATCGTGTTAATGTCTAAATTCGATTTAGAAAAGTTTCTGTCGGCCGTCGAGAAGTATAAGGTTACTGATATGTGGGTTGTGCCTCCAATCGTGCTGGCTTTGGCCAAGCAAAGGGTGGTTAAAAAGTATAATCTTTCCTCATTGAGGCATATCGGTTCTGGAGCTGCACCTTTGGGCAAAGACTTAATGGACGAGTGTGCTAAGAACATTCCTAGTGCTCGGGTTATTCAGGGATATGGTATGACTGAAACTTGTGGAATTATTTCATTGGAGAACCCACGAGTGGGAGTTCGCAATTCGGGTACGGCTGGAAAACTTGTTGGAGGAGTTGAGGCTCTAATTATCAGCGTTGATACATTGAAGCCTCTCCCTCCTAATCAAACTGGAGAGATATGGGTTAGAGGACCTAATATGATGCAAGGTTATTTCAACAATCCTCAGGCCACGATCGAGACGATTGATCGAAACGGCTGGGTACACACTGGTGATCTCGGATACTTTGACGAAAGTGGACGGCTTTTTGTAGTCGATCGAATTAAAGAGCTTATCAAGTTCAAAGGTTTTCAGATTGCACCAGCCGAGCTCGAAGGGCTGCTAGTTTCTCACCCGGAAATATTAGATTCTGTTGTCATCCCATTCCCCGACGCTGAAGCCGGAGAGGTTCCAATTGCGTTCGTAGTTCGCTCTCCGAACAGTTCACTCACCGAAGAAGACATAATCAATTTCATTTCAAAACAGGGAGAGATTCGTTTGTCGGGTCCGATGCAGGTGGCACCGTTCAAGAGAATACGACGGGTAACGTTTGTAAACAGCGTGCCAAAGTCGGCTTCCGGGAAGATCCTGCGGAGAGAGCTGATCGAGAAAGTTCGATCTAAAATCTGA 1659 46.11 MEKSGYGRDGVYRSLRPALSLPQDPDMSMVSFLFRNSSSYSHKPALIDADSSETLSFSLLKSMVIKVSHGLLHLGIKKNDVVLIFAPNSIQFPICFLGIIAIGAIATTCNPIYTVSELRKQAKDSKPKLLITVAELWDKAVNLNLPTVLLGPEGSSLPSANLKILNFHDLVQSGRSETHFPAVKVKQTDTAVLLYSSGTTGTSKGVILSHRNFISASLMITQDQEMAGEMHNVYLNVLPLFHVFGLCCVTFAQLQIGNPIVLMSKFDLEKFLSAVEKYKVTDMWVVPPIVLALAKQRVVKKYNLSSLRHIGSGAAPLGKDLMDECAKNIPSARVIQGYGMTETCGIISLENPRVGVRNSGTAGKLVGGVEALIISVDTLKPLPPNQTGEIWVRGPNMMQGYFNNPQATIETIDRNGWVHTGDLGYFDESGRLFVVDRIKELIKFKGFQIAPAELEGLLVSHPEILDSVVIPFPDAEAGEVPIAFVVRSPNSSLTEEDIINFISKQGEIRLSGPMQVAPFKRIRRVTFVNSVPKSASGKILRRELIEKVRSKI 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 37191931 37194628 + BLOR12260 Blo03g01079 58543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01079 552 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 551 - -
Blo03g01079 552 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Blo03g01079 552 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 551 - -
Blo03g01079 552 Gene3D - 440 551 IPR045851 -
Blo03g01079 552 SUPERFAMILY Acetyl-CoA synthetase-like 22 550 - -
Blo03g01079 552 Gene3D - 9 439 IPR042099 -
Blo03g01079 552 CDD 4CL 21 544 - -
Blo03g01079 552 Pfam AMP-binding enzyme 35 444 IPR000873 -
Blo03g01079 552 Pfam AMP-binding enzyme C-terminal domain 453 538 IPR025110 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01294 Blo03g01079 ECH
Blo03g01079 Blo03g01294 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00359 Blo-Chr3:8066656 Blo03g01079 Blo-Chr3:37191931 2.48E-60 dispersed
Blo03g01079 Blo-Chr3:37191931 Blo17g00714 Blo-Chr17:20865662 1.36E-150 dispersed
Blo14g00444 Blo-Chr14:5227190 Blo03g01079 Blo-Chr3:37191931 4.74E-20 dispersed
Blo19g00322 Blo-Chr19:20983235 Blo03g01079 Blo-Chr3:37191931 4.92E-63 dispersed
Blo03g00893 Blo-Chr3:34855723 Blo03g01079 Blo-Chr3:37191931 3.24E-144 transposed
Blo03g01079 Blo-Chr3:37191931 Blo03g01294 Blo-Chr3:39269528 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01079 K01904 - zju:107411478 822.772