Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01099 ATGGAATCTTGTGTAGATGGATGCCACTACCCCAAATTACTCAATGGGAAGGTTGGTTACTACCCAGAAAATATACCCTTTATCCCCATCTCTGGTTTTGAGGGAGACGAAATGATTGAGAGGCCTACCAACCTTGACAGGTACAAGGGTCCGACCCATCTCAAGGCTATTGACATGATTCAGGAGCTTAAGAGAACGCCTGGCAAGCCTCTCCGTCTTCCTCTTCAGGATGTTTACAAGATTGGTGGTATTGGAACTGTCTCAATTGGCCGTGTTGAGCACATTGCTGTGAAGTTTGCTGAGATTTTGACCAAGATCGACAGAATTCCCACCAAGCCCATGGTGGTTGAGACCTTCTCTGAGTACCCACCTCTTGGACGATTTGCTGTGAGGGACATGCGCCATACTGTGGCAGTTGGTGTGATTAAGAGTGTCGAGAAGAAAGACCCCACTGGTGCTAAAGTCACCAAGTCTGCACCAAAGAAGGGCAGAAAATGA 498 47.59 MESCVDGCHYPKLLNGKVGYYPENIPFIPISGFEGDEMIERPTNLDRYKGPTHLKAIDMIQELKRTPGKPLRLPLQDVYKIGGIGTVSIGRVEHIAVKFAEILTKIDRIPTKPMVVETFSEYPPLGRFAVRDMRHTVAVGVIKSVEKKDPTGAKVTKSAPKKGRK 165
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 37446173 37446996 - BLOR12280 Blo03g01099 58563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01099 165 Gene3D Translation factors 105 146 - -
Blo03g01099 165 PANTHER TRANSLATION FACTOR 17 93 - -
Blo03g01099 165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 86 IPR027417 -
Blo03g01099 165 Pfam Elongation factor Tu C-terminal domain 109 145 IPR004160 -
Blo03g01099 165 Gene3D - 8 66 IPR027417 -
Blo03g01099 165 Gene3D Translation factors 68 104 - -
Blo03g01099 165 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 92 145 IPR009001 -
Blo03g01099 165 PANTHER ELONGATION FACTOR 1-ALPHA 109 163 - -
Blo03g01099 165 PANTHER ELONGATION FACTOR 1-ALPHA 17 93 - -
Blo03g01099 165 PANTHER TRANSLATION FACTOR 109 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01099 Blo-Chr3:37446173 Blo12g00113 Blo-Chr12:8034008 3.74E-33 dispersed
Blo13g01110 Blo-Chr13:33230143 Blo03g01099 Blo-Chr3:37446173 4.36E-33 wgd
Blo14g00160 Blo-Chr14:1220991 Blo03g01099 Blo-Chr3:37446173 5.54E-28 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01099 K03231 - acan:ACA1_200430 180.259