Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo03g01102 | ATGGCTGGTACTATAGTCAATAGGAAAAAAATTGCAAAATTAAAGAAACCACCGGCAAAGAAGAAGCAAAAGCATGATCTTTTCAATTTAGAAGATCCCAAAGTAGAGGACCCTCCTCATGATCAAGCTAGAGAAGTTAATGGTAATGGAGAATACTCAGATTCTGGAGTGGATTTTTCTTCCGATGAAGATCCCTTAGCTGATGATTTTCTTGGAATAAGTGAGGATGAAGGTAAGTGTTCAGAGTCTTATTCTGGTTCAGATTCAGATGGTTTTGATATCGAGCAGTCGTCAAAAGCTATAGATGACCAAAAGGCTAAAGAACTAGAAGAAGCGGGGGCTGAAATGACACTCAACATTAATCAGGAATCTGATGAATTTAGATTACCAACTCATCAGGAACTTGAAGAAGAGGCACATAGGCCCCCTGATCTTGCAAATATTCAAAGGCGGATAAGAGAGATTGCTCGAGTCCTCACAAATTTTAAGACTTTGAGGCAAGATGGGGTCATGAGGAAGGACTACATCGAGCAAATTAGGAAGGATATGTGTTCATATTATGGTTACAATGATTTTCTAATAGGAGTGTTAGTAGAGATGTTTCCCGTTGCTGAGCTTTTGGAGATCGTAGAAGCTTTTGAGAAGCCAAGACCAATATGTTTAAGAACAAACACTCTAAAGACCCGGAGGCGTGACTTGGCTGATGTGCTGATAAATAGAGGAGTAAACTTGGCACCTTTGAGCAAGTGGTCCAAAGTAGGGCTGGTAGTGTATGATTCACAAGTGACAATTGGAGCCACTCCTGAATATATGGCTGGTTTTTATATGCTTCAAAGTGCAAGCTCATTTCTGCCTGTGATGGCCCTTGCTCCAAAAGAGAAAGAACGGATAGTTGATATGGCGGCTGCACCAGGTGGCAAAACAACATATATTGCTGCACTCATGAAAAATAGTGGAATAATTTTTGCAAATGAGTTTAAAGCTAAGAGGTTAAAGTCACTCACTGCAAATTTACATCGAATGGGGGTTACAAATACCATTGTTTGTAATTATGATGGAAAGGAGCTTCCAAAGGTTTTGGGTATTCACACAGCTGATAGAGTATTGTTGGATGCCCCATGTAGCGGATCTGGAGTCATCTCTAAAGACGAGTCTGTCAAAACCTCTAAAAGTTTAGAAGATATTGAAAAATGTGCTTATTTGCAGAAGGAACTTATACTTGCTGCAATAGATATGGTTGATGCCAATTCAAAAACTGGGGGTTATGTAGTTTATTCAACCTGCTCCATTATGGTGGCTGAGAATGAAGCAGTTGTAGACTATGCGATGAAGAAGAGGGATATTGAGCTTGTGCCATGTGGTCTTGACTTTGGGCGTCCAGGGTTCATCCGTTATAGAGAAAAACGGTTTCACCCATCTTTAGAGAAGACTAGGCGTTTCTACCCTCATGTACACAATATGGATGGCTTTTTTGTTGCAAAGAGTGGAGTCCTCGAAAACGGCAAGCCAGAATCCCAACCTTCATTCAAAAAGAAGGAAAAACGGGGATTCCCAACAGAGGCGGCAGAGAAAGTTGAGGCTGAAGAAAGTGGAGAAAGAAATGCTGGTGAGAATTTTCAACATCATGTTATACAAAAAAGCAGTAAAAGAAGAAAGAAGGAAGTAAAGAACAGAGAAGCTAAAAATGGCAAAGCAGAAGGATCCCAACACCCTTTCGAAAAGAAGGAAAAGCGGAAATTTCCATCGAAAGCGGAAATCTGTAAAAACAGGACCCTTCTGATTTTTAAGGGAATTGACGTGAATGCTGTGAGTACCGTTTGCAGCGAGGCTTCTGGCAGTGTAGGATTTCCTCGAGAGGAAGGCCATGGTCGGAGCAACTCCGAATCCATGCCTACCTTTTTCTCTGGCAGCGACTCTGTAAAAGTTGCTGGAGATGAAAGGAAGGTCGCAGCTTGGAAGCCGAGGCCAAGCAGAATGGCCAACAAAGCTCCAATCTCCACTAGCAACTCTGCACTTATTGCCATGATAGCTGATGAAGACACAGTAGTTGGATTTCTAATGGCTGGAGTAGGTAATGTTGACCTGAGGAGAAAGACAAATTACCTCATTGTGGACTCAAAAACAACTGTTAAACAAATTGAAGATGCCTTCAAGGAGTTCACAACAAGAGAGGATATTGCTGTAGTGCTCATCAGCCAATACGTTGCAAACATGATGAGGTTTTTGGTGGACAGCTATAACAAGCCAATTCCAGCAATTCTGGAGATTCCTTCGAAAAATCATCCTTATGATCCCACTCAAGACTCCATCTTGTCACGAGTGAAGCATCTTTTTTCTGCCGAGTCGGTGGCATCGGGGAGGCGCTGA | 2367 | 41.91 | MAGTIVNRKKIAKLKKPPAKKKQKHDLFNLEDPKVEDPPHDQAREVNGNGEYSDSGVDFSSDEDPLADDFLGISEDEGKCSESYSGSDSDGFDIEQSSKAIDDQKAKELEEAGAEMTLNINQESDEFRLPTHQELEEEAHRPPDLANIQRRIREIARVLTNFKTLRQDGVMRKDYIEQIRKDMCSYYGYNDFLIGVLVEMFPVAELLEIVEAFEKPRPICLRTNTLKTRRRDLADVLINRGVNLAPLSKWSKVGLVVYDSQVTIGATPEYMAGFYMLQSASSFLPVMALAPKEKERIVDMAAAPGGKTTYIAALMKNSGIIFANEFKAKRLKSLTANLHRMGVTNTIVCNYDGKELPKVLGIHTADRVLLDAPCSGSGVISKDESVKTSKSLEDIEKCAYLQKELILAAIDMVDANSKTGGYVVYSTCSIMVAENEAVVDYAMKKRDIELVPCGLDFGRPGFIRYREKRFHPSLEKTRRFYPHVHNMDGFFVAKSGVLENGKPESQPSFKKKEKRGFPTEAAEKVEAEESGERNAGENFQHHVIQKSSKRRKKEVKNREAKNGKAEGSQHPFEKKEKRKFPSKAEICKNRTLLIFKGIDVNAVSTVCSEASGSVGFPREEGHGRSNSESMPTFFSGSDSVKVAGDERKVAAWKPRPSRMANKAPISTSNSALIAMIADEDTVVGFLMAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAVVLISQYVANMMRFLVDSYNKPIPAILEIPSKNHPYDPTQDSILSRVKHLFSAESVASGRR | 788 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 37480364 | 37490926 | + | BLOR12283 | Blo03g01102 | 58566 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo03g01102 | 788 | MobiDBLite | consensus disorder prediction | 558 | 581 | - | - | |
Blo03g01102 | 788 | PANTHER | NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING | 12 | 587 | IPR023267 | GO:0001510 | |
Blo03g01102 | 788 | Gene3D | Vaccinia Virus protein VP39 | 285 | 595 | IPR029063 | - | |
Blo03g01102 | 788 | Gene3D | Sun protein; domain 3 | 175 | 282 | - | - | |
Blo03g01102 | 788 | PRINTS | RNA (C5-cytosine) methyltransferase NOP2 subfamily signature | 172 | 192 | IPR023273 | GO:0008168 | |
Blo03g01102 | 788 | PRINTS | RNA (C5-cytosine) methyltransferase NOP2 subfamily signature | 228 | 241 | IPR023273 | GO:0008168 | |
Blo03g01102 | 788 | PRINTS | RNA (C5-cytosine) methyltransferase NOP2 subfamily signature | 205 | 217 | IPR023273 | GO:0008168 | |
Blo03g01102 | 788 | PANTHER | BNACNNG49010D PROTEIN | 12 | 587 | - | - | |
Blo03g01102 | 788 | ProSiteProfiles | SAM-dependent MTase RsmB/NOP-type domain profile. | 209 | 498 | IPR001678 | GO:0008168 | |
Blo03g01102 | 788 | Coils | Coil | 106 | 126 | - | - | |
Blo03g01102 | 788 | Gene3D | ATPase, V1 complex, subunit F | 667 | 780 | IPR036906 | GO:0034220 | |
Blo03g01102 | 788 | MobiDBLite | consensus disorder prediction | 57 | 71 | - | - | |
Blo03g01102 | 788 | MobiDBLite | consensus disorder prediction | 498 | 581 | - | - | |
Blo03g01102 | 788 | TIGRFAM | V_ATP_synt_F: V-type ATPase, F subunit | 668 | 782 | IPR005772 | GO:0033180|GO:0046961|GO:1902600 | |
Blo03g01102 | 788 | Pfam | 16S rRNA methyltransferase RsmB/F | 286 | 494 | IPR001678 | GO:0008168 | |
Blo03g01102 | 788 | MobiDBLite | consensus disorder prediction | 23 | 44 | - | - | |
Blo03g01102 | 788 | Pfam | ATP synthase (F/14-kDa) subunit | 673 | 774 | IPR008218 | GO:0034220|GO:0046961 | |
Blo03g01102 | 788 | MobiDBLite | consensus disorder prediction | 1 | 92 | - | - | |
Blo03g01102 | 788 | MobiDBLite | consensus disorder prediction | 505 | 536 | - | - | |
Blo03g01102 | 788 | PRINTS | RNA (C5-cytosine) methyltransferase signature | 420 | 436 | IPR023267 | GO:0001510 | |
Blo03g01102 | 788 | PRINTS | RNA (C5-cytosine) methyltransferase signature | 298 | 308 | IPR023267 | GO:0001510 | |
Blo03g01102 | 788 | PRINTS | RNA (C5-cytosine) methyltransferase signature | 480 | 497 | IPR023267 | GO:0001510 | |
Blo03g01102 | 788 | PRINTS | RNA (C5-cytosine) methyltransferase signature | 366 | 378 | IPR023267 | GO:0001510 | |
Blo03g01102 | 788 | PRINTS | RNA (C5-cytosine) methyltransferase signature | 269 | 283 | IPR023267 | GO:0001510 | |
Blo03g01102 | 788 | SUPERFAMILY | AtpF-like | 673 | 776 | IPR036906 | GO:0034220 | |
Blo03g01102 | 788 | MobiDBLite | consensus disorder prediction | 618 | 637 | - | - | |
Blo03g01102 | 788 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 181 | 494 | IPR029063 | - | |
Blo03g01102 | 788 | TIGRFAM | nop2p: NOL1/NOP2/sun family putative RNA methylase | 221 | 494 | IPR011023 | GO:0003723|GO:0006396|GO:0008757 | |
Blo03g01102 | 788 | Pfam | N-terminal domain of 16S rRNA methyltransferase RsmF | 205 | 282 | IPR031341 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g00505 | Blo-Chr3:18793170 | Blo03g01102 | Blo-Chr3:37480364 | 8.44E-23 | dispersed | |
Blo03g00776 | Blo-Chr3:32404469 | Blo03g01102 | Blo-Chr3:37480364 | 2.88E-06 | dispersed | |
Blo03g01102 | Blo-Chr3:37480364 | Blo03g01127 | Blo-Chr3:37730924 | 0 | dispersed | |
Blo03g01102 | Blo-Chr3:37480364 | Blo04g01138 | Blo-Chr4:18725745 | 2.88E-16 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo03g01102 | K14835 | - | vvi:100265196 | 773.852 |