Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01106 ATGGCGGATATGACTCAGAATAACATCGCTGATTTTCCTGCTGTCCCGACTCAGGGAGGTCAATTTGTCCAGTACAACATATTCGGAAATTTCTTCGAGATCACTAGCAAGTATCGTCCTCCGATCATGCCGATAGGTCGTGGAGCCTACGGAATCGTCTGCTCGGTTTTAAATGCAGAAACCAACGAGATGGTTGCGATAAAGAAAATAGCCAACGCGTTTGACAATCAAATGGACGCAAAGCGAACGCTCAGAGAGATTAAGCTGCTGCGGCATTTGGATCACGAAAATATCATAGGTATTAGAGACGTTATTCCTCCACCTTTAAGAAGAGAATTTACAGATGTCTACGTTGCCACCGAGCTAATGGATACTGACCTTCACCAAATAATACGCTCCAATCAAGGTTTATCTGAAGAGCACTGTCAGAAATTAGCCCCAACTTATAGAACTTTCTGTTATACTTGGCTTATTTTAAAACTGCAACTTCTCGGAACACCTACCGAGTCTGATCTTGGGTTTGTTAGAAATGAGGATGCTAGACGATATATTCAACAACTTCCACAACACCCTCGTCAACCACTCACGACGTTGTTTCCTCATGTTCATCCCTTAGCAATTGATCTTGTTGACAAGATGTTGACTTTTGATCCCACACAGAGAATAACTGTTGAAGAAGCTTTAGCCCATCCATATCTTGAAAGATTACACGACATAGCTGATGAGCCTGAAATTCGTCTCTCAAATTCAGTGGAAAGCGTGGTGGTTTGTCAAAAAACACAGCAAGAAAGAAAACCAAGGCCTCAACAAGAGCAAGCCGTCAAATGCCCAAGATGCGACTCCGTTCATACCAAGTTCTGCTACTACAATAATTACAGTCTCACTCAGCCTAGATATTTCTGCAAATCTTGTAGAAGATACTGGACGAAAGGAGGAACACTGAGAAATATTCCGGTTGGTGGGGGCTGCAGGAAGAACAAAAAATCATCTTCATCTTCACCGTCTTCTTCTTCTTCTTCGTTTAAGAGGTCTTTAAATGATCAACCCTTCGCATTGGATCCAACAATGGCGTCCTATTATGATTCTTCTGATTTCACCTATTCATTTGGGCCGCCTCATCATAGCGAAAATTTTAATCTGGTTTCTGGTTTTGAAAATCATTGTTCTTCTGATACTCTCAAAAATAGGTTTATCGAAAGTTATCTGAGTTCACGTCGGAATCTGCAATCTGGGTTTGAGAATGCTGAGACGGGTAAGGTCGAAAATGGTGGTTGGAAGCCTTCATATGATCATGACGAAGTTGGAAACTTGACGACAACGGAAGAGCAAGCGTTTGGAGGGCAAGAAAGTGAAAGAAAAATTATGCGGGAATTTCCATGGCAGATTAATGGAGATGGAACTGGAGTTGGTTTCGATCCGGGAAGAGATTATCAGAGCTGGAAAGCAATTTCTTCTTCTTGGCCTCACGGTCTTCTTTATAGCCCTTTAATGTGA 1494 42.1 MADMTQNNIADFPAVPTQGGQFVQYNIFGNFFEITSKYRPPIMPIGRGAYGIVCSVLNAETNEMVAIKKIANAFDNQMDAKRTLREIKLLRHLDHENIIGIRDVIPPPLRREFTDVYVATELMDTDLHQIIRSNQGLSEEHCQKLAPTYRTFCYTWLILKLQLLGTPTESDLGFVRNEDARRYIQQLPQHPRQPLTTLFPHVHPLAIDLVDKMLTFDPTQRITVEEALAHPYLERLHDIADEPEIRLSNSVESVVVCQKTQQERKPRPQQEQAVKCPRCDSVHTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKKSSSSSPSSSSSSFKRSLNDQPFALDPTMASYYDSSDFTYSFGPPHHSENFNLVSGFENHCSSDTLKNRFIESYLSSRRNLQSGFENAETGKVENGGWKPSYDHDEVGNLTTTEEQAFGGQESERKIMREFPWQINGDGTGVGFDPGRDYQSWKAISSSWPHGLLYSPLM 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 37521695 37528930 - BLOR12287 Blo03g01106 58570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01106 497 SMART serkin_6 39 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g01106 497 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 159 245 - -
Blo03g01106 497 Pfam Dof domain, zinc finger 272 328 IPR003851 GO:0003677|GO:0006355
Blo03g01106 497 ProSiteProfiles Zinc finger Dof-type profile. 274 328 IPR003851 GO:0003677|GO:0006355
Blo03g01106 497 Gene3D Phosphorylase Kinase; domain 1 16 143 - -
Blo03g01106 497 Pfam Protein kinase domain 44 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g01106 497 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 145 - -
Blo03g01106 497 MobiDBLite consensus disorder prediction 319 344 - -
Blo03g01106 497 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 145 - -
Blo03g01106 497 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 159 245 - -
Blo03g01106 497 Gene3D Transferase(Phosphotransferase) domain 1 161 250 - -
Blo03g01106 497 MobiDBLite consensus disorder prediction 325 344 - -
Blo03g01106 497 SUPERFAMILY Protein kinase-like (PK-like) 21 244 IPR011009 -
Blo03g01106 497 ProSitePatterns Zinc finger Dof-type signature. 276 312 IPR003851 GO:0003677|GO:0006355
Blo03g01106 497 ProSitePatterns Protein kinases ATP-binding region signature. 45 69 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01106 Blo-Chr3:37521695 Blo06g00804 Blo-Chr6:31316561 1.52E-30 dispersed
Blo06g00054 Blo-Chr6:1444236 Blo03g01106 Blo-Chr3:37521695 3.76E-33 dispersed
Blo16g00316 Blo-Chr16:8052467 Blo03g01106 Blo-Chr3:37521695 8.85E-32 dispersed
Blo16g00241 Blo-Chr16:5559856 Blo03g01106 Blo-Chr3:37521695 1.55E-37 transposed
Blo13g01101 Blo-Chr13:33176376 Blo03g01106 Blo-Chr3:37521695 3.12E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12160 PF00069 Pkinase 5.30E-17 CL0016 Blo TF
84199 PF00069 Pkinase 5.30E-17 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01106 K20536 - csv:101202796 267.7