Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo03g01106 | ATGGCGGATATGACTCAGAATAACATCGCTGATTTTCCTGCTGTCCCGACTCAGGGAGGTCAATTTGTCCAGTACAACATATTCGGAAATTTCTTCGAGATCACTAGCAAGTATCGTCCTCCGATCATGCCGATAGGTCGTGGAGCCTACGGAATCGTCTGCTCGGTTTTAAATGCAGAAACCAACGAGATGGTTGCGATAAAGAAAATAGCCAACGCGTTTGACAATCAAATGGACGCAAAGCGAACGCTCAGAGAGATTAAGCTGCTGCGGCATTTGGATCACGAAAATATCATAGGTATTAGAGACGTTATTCCTCCACCTTTAAGAAGAGAATTTACAGATGTCTACGTTGCCACCGAGCTAATGGATACTGACCTTCACCAAATAATACGCTCCAATCAAGGTTTATCTGAAGAGCACTGTCAGAAATTAGCCCCAACTTATAGAACTTTCTGTTATACTTGGCTTATTTTAAAACTGCAACTTCTCGGAACACCTACCGAGTCTGATCTTGGGTTTGTTAGAAATGAGGATGCTAGACGATATATTCAACAACTTCCACAACACCCTCGTCAACCACTCACGACGTTGTTTCCTCATGTTCATCCCTTAGCAATTGATCTTGTTGACAAGATGTTGACTTTTGATCCCACACAGAGAATAACTGTTGAAGAAGCTTTAGCCCATCCATATCTTGAAAGATTACACGACATAGCTGATGAGCCTGAAATTCGTCTCTCAAATTCAGTGGAAAGCGTGGTGGTTTGTCAAAAAACACAGCAAGAAAGAAAACCAAGGCCTCAACAAGAGCAAGCCGTCAAATGCCCAAGATGCGACTCCGTTCATACCAAGTTCTGCTACTACAATAATTACAGTCTCACTCAGCCTAGATATTTCTGCAAATCTTGTAGAAGATACTGGACGAAAGGAGGAACACTGAGAAATATTCCGGTTGGTGGGGGCTGCAGGAAGAACAAAAAATCATCTTCATCTTCACCGTCTTCTTCTTCTTCTTCGTTTAAGAGGTCTTTAAATGATCAACCCTTCGCATTGGATCCAACAATGGCGTCCTATTATGATTCTTCTGATTTCACCTATTCATTTGGGCCGCCTCATCATAGCGAAAATTTTAATCTGGTTTCTGGTTTTGAAAATCATTGTTCTTCTGATACTCTCAAAAATAGGTTTATCGAAAGTTATCTGAGTTCACGTCGGAATCTGCAATCTGGGTTTGAGAATGCTGAGACGGGTAAGGTCGAAAATGGTGGTTGGAAGCCTTCATATGATCATGACGAAGTTGGAAACTTGACGACAACGGAAGAGCAAGCGTTTGGAGGGCAAGAAAGTGAAAGAAAAATTATGCGGGAATTTCCATGGCAGATTAATGGAGATGGAACTGGAGTTGGTTTCGATCCGGGAAGAGATTATCAGAGCTGGAAAGCAATTTCTTCTTCTTGGCCTCACGGTCTTCTTTATAGCCCTTTAATGTGA | 1494 | 42.1 | MADMTQNNIADFPAVPTQGGQFVQYNIFGNFFEITSKYRPPIMPIGRGAYGIVCSVLNAETNEMVAIKKIANAFDNQMDAKRTLREIKLLRHLDHENIIGIRDVIPPPLRREFTDVYVATELMDTDLHQIIRSNQGLSEEHCQKLAPTYRTFCYTWLILKLQLLGTPTESDLGFVRNEDARRYIQQLPQHPRQPLTTLFPHVHPLAIDLVDKMLTFDPTQRITVEEALAHPYLERLHDIADEPEIRLSNSVESVVVCQKTQQERKPRPQQEQAVKCPRCDSVHTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKKSSSSSPSSSSSSFKRSLNDQPFALDPTMASYYDSSDFTYSFGPPHHSENFNLVSGFENHCSSDTLKNRFIESYLSSRRNLQSGFENAETGKVENGGWKPSYDHDEVGNLTTTEEQAFGGQESERKIMREFPWQINGDGTGVGFDPGRDYQSWKAISSSWPHGLLYSPLM | 497 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 37521695 | 37528930 | - | BLOR12287 | Blo03g01106 | 58570 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo03g01106 | 497 | SMART | serkin_6 | 39 | 233 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Blo03g01106 | 497 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 159 | 245 | - | - | |
Blo03g01106 | 497 | Pfam | Dof domain, zinc finger | 272 | 328 | IPR003851 | GO:0003677|GO:0006355 | |
Blo03g01106 | 497 | ProSiteProfiles | Zinc finger Dof-type profile. | 274 | 328 | IPR003851 | GO:0003677|GO:0006355 | |
Blo03g01106 | 497 | Gene3D | Phosphorylase Kinase; domain 1 | 16 | 143 | - | - | |
Blo03g01106 | 497 | Pfam | Protein kinase domain | 44 | 146 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Blo03g01106 | 497 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 16 | 145 | - | - | |
Blo03g01106 | 497 | MobiDBLite | consensus disorder prediction | 319 | 344 | - | - | |
Blo03g01106 | 497 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 16 | 145 | - | - | |
Blo03g01106 | 497 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 159 | 245 | - | - | |
Blo03g01106 | 497 | Gene3D | Transferase(Phosphotransferase) domain 1 | 161 | 250 | - | - | |
Blo03g01106 | 497 | MobiDBLite | consensus disorder prediction | 325 | 344 | - | - | |
Blo03g01106 | 497 | SUPERFAMILY | Protein kinase-like (PK-like) | 21 | 244 | IPR011009 | - | |
Blo03g01106 | 497 | ProSitePatterns | Zinc finger Dof-type signature. | 276 | 312 | IPR003851 | GO:0003677|GO:0006355 | |
Blo03g01106 | 497 | ProSitePatterns | Protein kinases ATP-binding region signature. | 45 | 69 | IPR017441 | GO:0005524 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g01106 | Blo-Chr3:37521695 | Blo06g00804 | Blo-Chr6:31316561 | 1.52E-30 | dispersed | |
Blo06g00054 | Blo-Chr6:1444236 | Blo03g01106 | Blo-Chr3:37521695 | 3.76E-33 | dispersed | |
Blo16g00316 | Blo-Chr16:8052467 | Blo03g01106 | Blo-Chr3:37521695 | 8.85E-32 | dispersed | |
Blo16g00241 | Blo-Chr16:5559856 | Blo03g01106 | Blo-Chr3:37521695 | 1.55E-37 | transposed | |
Blo13g01101 | Blo-Chr13:33176376 | Blo03g01106 | Blo-Chr3:37521695 | 3.12E-53 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12160 | PF00069 | Pkinase | 5.30E-17 | CL0016 | Blo | TF | |
84199 | PF00069 | Pkinase | 5.30E-17 | CL0016 | Blo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo03g01106 | K20536 | - | csv:101202796 | 267.7 |