Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01130 ATGGCGGAGGAGAAACGAGTTGTCGTACAGAGCCTGATCGAGGCAGTGAACGAGATTGCTTCCATCTCGGATTACAGGAACACTGTGAAGAAGGAGTATTGCAATTTAGCAAGGAGATTGAAGCTTCTGACCCCAATGTTCGAGGAAATAAGGGACAGCGAGGAGGCGCTCCCCGAGGAGACTCTGGAGGCTCTAGTCTCATTAAAAGCAGCTATGAAATCAGCTATAGAGTTGCTCAAATTCGGAAGCGAGGGAAGTAAGATTTACCTGGTTCTAGAAATGGAGAAAATTATGCACAAATTCCATGAGATAACAGCTCAGTTGGAGCAAGCTTTGAGCGGAATTTCCTATGATAATGTGGACACATCTGATGAAGTTAAGGAGCAGGTTGAACTTGTTCTTGCCCAGTTTAGAAGAGCTAAAGCCAGGATTGATATGCCTGACGCTCAGCTGCATGATGAGCTTGTATCAGTATATCAGACAAATGATTCGGCTACAGATCCAGCTGTCATACGGATACTGGCTGAAAAATTGGATCTAACTGGAGTATCTGACATTAAACAAGAATCGGAGGCTTTGTCTGAGATGTCTATTGCCAGTGGTGATGACCCTGGAGAGACTTTTGAGAAGATGTTAATGCTCCTGAAGAAAATAAAAGATTTTGTACTGACAGAATACCCTGAAATGGATGATCCAGCTCAAGATAAAAGTATATCCTCTGGTAATGGAGTGCAAGTATCTGGAGAAAGCAATTACAAATCTCCAGTTATTCCAGATGATTTTCGTTGCCCCATTTCTCTGGAATTGATGAAGGATCCTGTCATTGTTTCTACAGGACAGACTTATGAACGTTCCTGCATTGAAAAGTGGCTGGAAGCAGGGCATGGAACATGTCCAAAGACGCAACAGAAACTCTCCAGCACCACTCTTACGCCAAATTATGTCTTGCGTAGTCTCATAGCGCAGTGGTGCGAGGCAAATGGGCTTGAACCACCAAAGAGACCCAGTAGTTCTCAGTCTAAAACATCAGCTTGCTCACCTGCGGAACGCAATAAAATTGAAATTCTTCTTCATAAACTAATGTCTGGCAACCCTGAAGATCAGCTATGTGCTGCTGGTGAGATTCGCCTTCTTGCCAAGCGCAATGCCGATAACCGTGTAGCCATTGCTGAGGCCGGTGCAATCCCTCTTCTCGTGAGCCTCCTTTTAACAACAGATACACGCATTCAAGAGCATGCAGTAACATCACTTCTTAACCTTTCCATCTGCGAGGAAAATAAGGGAGCCATTGTGTCCTCTGGGGCTGTTCCAGGTATAGTTCACGTGCTCAAGAAAGGAAGCATGGAAGCTAGGGAAAATGCTGCAGCCACCCTTTTCAGCCTTTCTGTTGTGGATGGAAATAAAGTTACAATTGGTGCATCTGGAGCCATTCCACCACTTGTTATGCTGCTAAGTGAAGGAACACAAAGGGGAAAGAAAGATGCTGCCACTGCTCTCTTCAACTTGTGCATATACTTGGGGAACAAAGGAAAGGCAGTCAGGGCTGGTGTAATTCCCATACTGATGCGACTATTGACAGAGCCGGGAGGAGGAATGGTGGATGAGGCCTTAGCCATCTTAGCCATATTGGCTGGCCATCCTGAAGGTAGAGGTGCCATTGGAGCAGCCAATGCTGTTCCTGTTTTAGTAGAGGTTATCGGGACTGGATCTCCCAGGAACAGAGAGAATGCAGCTGCAGTTTTGGTGCACCTTTGTGCAGGGGACCACCGACATCTAGTCGAGGCTAAGGAACTAGGGGTGGTTGGGGCATTGATCGATTTGGCACAAAATGGCACAGATAGGGGCAAGAGGAAAGCTGCACAATTGCTTGAGCGGATGAGCAGGTTTATTGAACAGCAGGCTCAGGTTCAGGCTCAGGCTCAGGCTCAAGCGGAGTCTCAATCACAGATCCAGACATCCGACCACCTGTCCACGGGGGACAGTTGA 1986 46.68 MAEEKRVVVQSLIEAVNEIASISDYRNTVKKEYCNLARRLKLLTPMFEEIRDSEEALPEETLEALVSLKAAMKSAIELLKFGSEGSKIYLVLEMEKIMHKFHEITAQLEQALSGISYDNVDTSDEVKEQVELVLAQFRRAKARIDMPDAQLHDELVSVYQTNDSATDPAVIRILAEKLDLTGVSDIKQESEALSEMSIASGDDPGETFEKMLMLLKKIKDFVLTEYPEMDDPAQDKSISSGNGVQVSGESNYKSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHGTCPKTQQKLSSTTLTPNYVLRSLIAQWCEANGLEPPKRPSSSQSKTSACSPAERNKIEILLHKLMSGNPEDQLCAAGEIRLLAKRNADNRVAIAEAGAIPLLVSLLLTTDTRIQEHAVTSLLNLSICEENKGAIVSSGAVPGIVHVLKKGSMEARENAAATLFSLSVVDGNKVTIGASGAIPPLVMLLSEGTQRGKKDAATALFNLCIYLGNKGKAVRAGVIPILMRLLTEPGGGMVDEALAILAILAGHPEGRGAIGAANAVPVLVEVIGTGSPRNRENAAAVLVHLCAGDHRHLVEAKELGVVGALIDLAQNGTDRGKRKAAQLLERMSRFIEQQAQVQAQAQAQAESQSQIQTSDHLSTGDS 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 37761378 37765017 + BLOR12311 Blo03g01130 58594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01130 661 MobiDBLite consensus disorder prediction 638 661 - -
Blo03g01130 661 Pfam Armadillo/beta-catenin-like repeat 547 586 IPR000225 GO:0005515
Blo03g01130 661 Pfam Armadillo/beta-catenin-like repeat 382 421 IPR000225 GO:0005515
Blo03g01130 661 Pfam Armadillo/beta-catenin-like repeat 466 503 IPR000225 GO:0005515
Blo03g01130 661 Pfam Armadillo/beta-catenin-like repeat 424 462 IPR000225 GO:0005515
Blo03g01130 661 Gene3D - 337 658 IPR011989 -
Blo03g01130 661 SUPERFAMILY ARM repeat 353 634 IPR016024 -
Blo03g01130 661 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 6 643 - -
Blo03g01130 661 SUPERFAMILY RING/U-box 248 333 - -
Blo03g01130 661 Gene3D - 7 118 IPR036537 GO:0007166
Blo03g01130 661 ProSiteProfiles U-box domain profile. 256 330 IPR003613 GO:0004842|GO:0016567
Blo03g01130 661 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 257 330 IPR013083 -
Blo03g01130 661 MobiDBLite consensus disorder prediction 235 251 - -
Blo03g01130 661 Pfam U-box domain 257 327 IPR003613 GO:0004842|GO:0016567
Blo03g01130 661 PANTHER U BOX DOMAIN-CONTAINING 6 643 - -
Blo03g01130 661 SMART Ubox_2 260 323 IPR003613 GO:0004842|GO:0016567
Blo03g01130 661 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 393 435 IPR000225 GO:0005515
Blo03g01130 661 MobiDBLite consensus disorder prediction 231 251 - -
Blo03g01130 661 SMART arm_5 588 628 IPR000225 GO:0005515
Blo03g01130 661 SMART arm_5 546 586 IPR000225 GO:0005515
Blo03g01130 661 SMART arm_5 382 422 IPR000225 GO:0005515
Blo03g01130 661 SMART arm_5 423 463 IPR000225 GO:0005515
Blo03g01130 661 SMART arm_5 464 504 IPR000225 GO:0005515
Blo03g01130 661 SMART arm_5 505 545 IPR000225 GO:0005515
Blo03g01130 661 CDD RING-Ubox_PUB 261 303 IPR045210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01409 Blo-Chr1:52574605 Blo03g01130 Blo-Chr3:37761378 2.22E-32 dispersed
Blo03g01130 Blo-Chr3:37761378 Blo18g00747 Blo-Chr18:20192362 1.59E-172 dispersed
Blo11g00265 Blo-Chr11:2133854 Blo03g01130 Blo-Chr3:37761378 2.19E-105 dispersed
Blo11g00425 Blo-Chr11:3699585 Blo03g01130 Blo-Chr3:37761378 2.13E-46 dispersed
Blo16g01191 Blo-Chr16:40421873 Blo03g01130 Blo-Chr3:37761378 4.23E-49 dispersed
Blo16g01194 Blo-Chr16:40439448 Blo03g01130 Blo-Chr3:37761378 1.61E-60 dispersed
Blo17g00893 Blo-Chr17:29467071 Blo03g01130 Blo-Chr3:37761378 2.89E-28 dispersed
Blo18g00477 Blo-Chr18:5685796 Blo03g01130 Blo-Chr3:37761378 2.30E-32 dispersed
Blo18g00742 Blo-Chr18:19986181 Blo03g01130 Blo-Chr3:37761378 8.29E-17 dispersed
Blo04g00330 Blo-Chr4:2614351 Blo03g01130 Blo-Chr3:37761378 0 transposed
Blo08g00300 Blo-Chr8:4198067 Blo03g01130 Blo-Chr3:37761378 8.57E-19 transposed
Blo15g00428 Blo-Chr15:6165272 Blo03g01130 Blo-Chr3:37761378 2.01E-161 transposed
Blo14g00121 Blo-Chr14:881191 Blo03g01130 Blo-Chr3:37761378 0 wgd
Blo03g01130 Blo-Chr3:37761378 Blo03g01237 Blo-Chr3:38604917 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01130 - - mnt:21407917 976.467