Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01143 ATGCCGCTCCCACGTATTGCCATCGGAAACGCAGATGAGTTCAGGCAAGCTGAGTCATACAAAACGGCTTTCGCTGAGTTCATCAGCGTTCTCATTTTCGTATTTGCCGGAGAAGGCTCCGGAATGGCTTTCAGTGAGTTTCTGATTCCCCCGAAACGTCTCTCATTTGGGTCGACTACGCCGGCAGGTTTAATCGCAGCATCGTTAGCTCATGGGTTCGGACTGTTTGTGGCGGTTGCTGTCGGGGCAAAGATTTCCGGTGGCCATGTTAATCCAGCTGTCACATTTGGAGCTTTCGTCGGCGGGCATATAACCTTGATCAAACTTGTTTTGTACTGGATCGCCCAGTTGCTTGGCTCCATTGTCGCTTGCTTGCTCCTTAAATTCTCCACCGGCGGGCTGGAAACATCGCCTTTTACTTTATCTTCAGACGTCACCGTTTGGAATGCGGTCGTGTTCGAAATAGTGATGACCTTTGGTCTGATTTACACAGTATATGCTACGGCCATTGACCCAAAGAGCGGGACGTTAGGGACAATTGCACCCATCGCCATTGGTTTCATCGTGGGCGCAAACATCTTAGCCGGCGGTGCCTTCGACGGAGCCTCAATGAACCCAGCCGTGTCGTTTGGACCGTCCGTCGTCAGCTGGTCGTGGGAGTATCAGTGGGTCTACTGGGTCGGACCTCTCATCGGAGGTGGCCTCGCCGGCTTCGTTTACCAGACCGTTTTCATTTCTCCCGACACTCACCAGCAACTTCCCACGTCAGACTATTAA 777 52.38 MPLPRIAIGNADEFRQAESYKTAFAEFISVLIFVFAGEGSGMAFSEFLIPPKRLSFGSTTPAGLIAASLAHGFGLFVAVAVGAKISGGHVNPAVTFGAFVGGHITLIKLVLYWIAQLLGSIVACLLLKFSTGGLETSPFTLSSDVTVWNAVVFEIVMTFGLIYTVYATAIDPKSGTLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPSVVSWSWEYQWVYWVGPLIGGGLAGFVYQTVFISPDTHQQLPTSDY 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 37834277 37835220 - BLOR12324 Blo03g01143 58607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01143 258 Pfam Major intrinsic protein 14 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo03g01143 258 PANTHER AQUAPORIN-8 1 258 IPR034294 -
Blo03g01143 258 CDD MIP 21 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo03g01143 258 PANTHER AQUAPORIN TIP1-1 1 258 - -
Blo03g01143 258 ProSitePatterns MIP family signature. 89 97 IPR022357 -
Blo03g01143 258 PRINTS Major intrinsic protein family signature 223 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo03g01143 258 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo03g01143 258 PRINTS Major intrinsic protein family signature 71 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo03g01143 258 PRINTS Major intrinsic protein family signature 153 171 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo03g01143 258 PRINTS Major intrinsic protein family signature 108 127 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo03g01143 258 PRINTS Major intrinsic protein family signature 186 208 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo03g01143 258 SUPERFAMILY Aquaporin-like 15 249 IPR023271 -
Blo03g01143 258 Gene3D Glycerol uptake facilitator protein. 4 258 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01143 Blo-Chr3:37834277 Blo07g01383 Blo-Chr7:33920361 3.11E-127 dispersed
Blo03g01143 Blo-Chr3:37834277 Blo15g00130 Blo-Chr15:1155224 4.73E-55 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01143 K09873 - zju:107405110 400.979