Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01151 CTGGCGGACATTTACAGCACGGTAATGAGTGAGAGCGACGTCCGTCGTGTTGCCAGCCGCAGGAGATCAATGGACCACGGGAAGGTTGAATTTGTGCCTGGAATGGCGATCCCGGAAATGGATGACCATCGAAAGCGTCAGAAACTAGAGGCTGTGGCTGATTCGTTTTCTTGGGACTGTAGATGCGCAGTGGACAGTTTCTCTTTAGACGAAGACAAGGACTTAGTAAAGCTTCAATGTAGGAAACCGGAGATGGTGGAAAGCTCTCCGTCACCTCCGTCTTCGGACCTTTCCATATCGGTTCTCTGTCGATCTCCCGCAGCTCGAGTGCCTCCAGAAGTTACGGGAGAGTATCCGAGGTTCGGAGTGGTTTCGATTCGTGGAAGGCGAAGAGACATGGAAGATGCGGTCGCTGTTCAACCGTCGTTTTCCCGCCTAGGCCATGAATCCAACCCTCACCTGCATTACTTCGCCGTTTACGACGGTCACGGTTGCTCTCATGTGGCGATCAAGTGCAAGGAGCGGTTGCACGAGCTAGTGAAGGAAGAGTTGGAAAGAGAGGTTGGATCACCTTCGCCGAATGATTGGAAGAGCGCCATGGAAAGAAGCTTTCGGCGCATGGACGAGGAAGTCAGTTGCTGTAGTGAAAAAGTTGCAGGTTTCAACTGCAGATGCGAGCTTCAACCCCCTGATTGCAATACAGTTGGAACTACAGCCGTGGCTGCTATTTTAACCCCTGAGAAGATCATCGTCTCTAACTGCGGCGACTCGAGGGCTGTTCTCTGTCGTAACGGCAAACCAGTCCCTCTCTCCTCAGATCACAAACCGGATCGACCAGATGAACTGAATCGGATCCAAGCGGCCGGCGGGCAAGTCATTTACTGGGGAGGCCCAAGGGTTCTCGGAGTTCTAGCCACATCAAGAGCCATTGGTGACAACTATCTGAAGCCCTACGTAAGCTGCGACCCGGAAGTGACGATAACTGATCGGTCGGCGGAGGATGATTGTCTCCTAATCGGGAGCGATGGACTCTGGGACGTCATGTCCAACGAGACGGCATGCGGGGTGGCCCGCATGTGCCTCCAAGGCAAGTTGCAAAGGTTGCCGCCGCACTGTTCTCCAGCGCGCAGCGCAGTCGCTGGGCCAGAAATCCCTGATAAGGCATGCAGCGAGGCGGCCACGTTGCTGAGCAAGTTGGCACTGGCCCGGAAAAGTGGTGACAATGTGAGCTTGGTAATCGTAGACCTGAGGAGGGACTGCATGTAA 1266 54.27 LADIYSTVMSESDVRRVASRRRSMDHGKVEFVPGMAIPEMDDHRKRQKLEAVADSFSWDCRCAVDSFSLDEDKDLVKLQCRKPEMVESSPSPPSSDLSISVLCRSPAARVPPEVTGEYPRFGVVSIRGRRRDMEDAVAVQPSFSRLGHESNPHLHYFAVYDGHGCSHVAIKCKERLHELVKEELEREVGSPSPNDWKSAMERSFRRMDEEVSCCSEKVAGFNCRCELQPPDCNTVGTTAVAAILTPEKIIVSNCGDSRAVLCRNGKPVPLSSDHKPDRPDELNRIQAAGGQVIYWGGPRVLGVLATSRAIGDNYLKPYVSCDPEVTITDRSAEDDCLLIGSDGLWDVMSNETACGVARMCLQGKLQRLPPHCSPARSAVAGPEIPDKACSEAATLLSKLALARKSGDNVSLVIVDLRRDCM 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 37916954 37918530 + BLOR12332 Blo03g01151 58615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01151 421 CDD PP2Cc 120 416 IPR001932 -
Blo03g01151 421 Pfam Protein phosphatase 2C 121 409 IPR001932 -
Blo03g01151 421 SMART PP2C_4 110 414 IPR001932 -
Blo03g01151 421 SUPERFAMILY PP2C-like 119 417 IPR036457 -
Blo03g01151 421 ProSiteProfiles PPM-type phosphatase domain profile. 120 416 IPR001932 -
Blo03g01151 421 SMART PP2C_SIG_2 135 416 IPR001932 -
Blo03g01151 421 PANTHER ALPHABET, ISOFORM E-RELATED 111 419 - -
Blo03g01151 421 ProSitePatterns PPM-type phosphatase domain signature. 156 164 IPR000222 GO:0043169
Blo03g01151 421 Gene3D - 113 419 IPR036457 -
Blo03g01151 421 PANTHER PROTEIN PHOSPHATASE 2C 37 111 419 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01151 Blo-Chr3:37916954 Blo13g00881 Blo-Chr13:31347934 3.80E-131 dispersed
Blo13g01063 Blo-Chr13:32859847 Blo03g01151 Blo-Chr3:37916954 9.30E-153 wgd
Blo14g00107 Blo-Chr14:745207 Blo03g01151 Blo-Chr3:37916954 1.88E-137 wgd
Blo03g01151 Blo-Chr3:37916954 Blo03g01226 Blo-Chr3:38515727 0 wgd
Blo03g01151 Blo-Chr3:37916954 Blo04g00122 Blo-Chr4:1023845 1.20E-128 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01151 K14497 - zju:107410893 500.745