Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01166 ATGTTCATTATGTCCTCGGTTGAGTCTGTGAGTCCATTTATATACAAGAAGTTTCATTTTGAATCCAATTACAATCTTCGTTATTGTAATGGATTGGGTTTCGCTCGGTGTCAATCGCGGCTTTTTCGTCAGAACTTTACCCGTTTTGTAGCGAATTCGGTGTGTTTTTCTTCTTTGAACCTACACAGACGAGCAGTTTCAAGAAATTCGGAAAAATTCAATCTTTGGGGAGGTGTAGCGAGGGGTTTCTGTTTGGGGGAAACAAAGATATCGGCGAATAGTAGGGATGGTGATTCAACTGCTAGTCCAAGTGAAAACAGCGAAGCAAAGGCCGGTGATAGTCAGGGGGTGAATAAGAGCTCGGCCAGCTCGGGTTCTTCGGCGTCCAATAGGAAGCGAGAGAAGCAAGGAAAAGGGGGTTGGTGGTGGTCCAAAGGCGGGAAATGGCGATGGCAGCCTATTGTTCAGGCTCAGGAGATTGGAATTTTACTTCTTCAGCTTGGGATTGTGATTTTTGTTATGCGGTTGCTCCGCCCGGGAATTCCCTTACCTGGTTCGGAACCTAGGACGCCAACCACGTTCGTAACAGTTTCTTACAGCGACTTCTTGAGCAAGATAAATGCCAACCAAGTGCATAAGGTTGAGGTTGATGGGGTTCATATCATGTTTAAGTTGAAGTCTGAACCAAGTAACCTGGAAAGCGAAGTATTGAGTGCAAATAAGCTACAGGAATCTGAGTCTTTGATAAAGAGTGTGGCTCCAACGAAGAGAATTGTTTATACAACTACGAGGCCAAGTGATATAAAAACTCCATACGAGAAGATGCTTGACAATGAAGTGGAGTTTGGATCACCGGACAAGCGGTCTGGTGGATTTTTTAACTCTGCATTGATAGCTTTGTTTTATGTTGCTGTGCTAGCAGGGCTGCTCCACAGGTTTCCTGTAACCTTTTCTCAGCATTCGGCTGGTCAGTTTAGAAATAGAAAATCCGGGGGTTCTGGTGGTGCAAAAGTGTCTGAACAAGGGGAAACGGTTACATTTGCTGATGTAGCTGGCGTTGATGAGGCTAAAGAAGAGCTAGAGGAAATAGTGGAATTTCTTCGGAATCCCGATAGATATATACGTCTTGGTGCCCGTCCTCCTCGAGGTGTTCTCCTGGTTGGTCTTCCTGGGACAGGCAAGACTCTTCTGGCAAAGGCTGTAGCAGGAGAAGCAGAAGTGCCGTTTATAAGTTGTTCTGCCAGTGAGTTTGTTGAGTTATATGTTGGCATGGGTGCCTCCCGCGTGAGAGATCTTTTTGCTCGGGCAAAGAAGGAGGCACCATCAATAATCTTCATTGATGAGATAGATGCTGTAGCAAAGAGTCGTGATGGTAAATTTCGTATTGTCAGTAATGATGAGAGAGAGCAAACCTTGAATCAGTTGCTTACGGAAATGGATGGATTTGACAGCAACTCTGCTGTAATTGTTCTTGGAGCAACTAATCGATCAGATGTCTTAGACCCTGCTCTTCGTCGACCTGGGAGATTTGATCGTGTGGTTATGGTGGAGACACCTGATAGAATGGGAAGAGAAGCCATTCTGAAAGTTCATGTTTTCAAGAAAGAACTTCCGCTTGGGGAGGATGTCAACCTCAGTCATATCGCCTCTATGACCACAGGATTCACTGGGGCAGATCTTGCAAATCTGGTAAATGAAGCTGCTTTGCTGGCTGGAAGAAAAAATAAACTTGTTGTTGAGAAAATTGATTTCATTCAAGCAGTGGAGAGATCAATAGCTGGCATAGAGAAGAAGACTGCAAAGTTGCAGGGAAGTGAAAAGGCTGTTGTTGCAAGACACGAAGCTGGTCATGCAGTTGTAGGTACGGCTGTGGCTAATCTACTCCCTGGACAGCCTCGTGTCGAGAAGTTAAGCATATTGCCAAGGTCCGGCGGGGCATTAGGCTTTACCTACATTCCCCCAACAAGTGAAGATAGATATTTGCTGTTCATCGATGAATTGCGTGGTCGCTTGGTAACTCTTCTTGGAGGGCGGGCTGCAGAAGAAGTTATTTACTCAGGTCGAGTATCAACAGGAGCTCTTGATGATATCCGCAGAGCAACTGACATGGCATACAAGGCGGTAGCAGAGTATGGTCTTAATCAGACAATTGGGCCTGTGTCCATAGCAACACTTTCTGGAGGTGGGATGGATGACTCAGGAGCTATTCCTTGGGGCAGAGATCAGGGACATCTCGTCGATCTTGTACAAAGGGAGGTGAAAATGTTGCTGCAATCCGCGCTTGACATTGCGCTCTATGTTGTGCGTGCTAATCCAGCTGTTTTGGAAGGCCTTGGTGCCCAATTGGAAGATAAAGAAAAAGTGGAAGGTGAGGAGTTAGAGGAGTGGTTGAAAATGGTGGTTGCTCCAAAAGAACTGACCATCTTCATCCGAGGCAAGGGCAAGCAAGAGTCTCTCCTCCCATTACAAACGATCAGATCACCATTTTTTTACGCTCTTCTCGAGATGGAAACGCTTGTTCTCTTTCTCAGCTTGTCGACTGCTTTATCCGCCTATTTCTTCTGGTTTTATCTCCTCACTAAGAAGCTCTCCGGCCCTAAAGTATGGCCGGTGATAGGCAGCCTACCGGAACTGTTTGCCAACCGGGAGAGAATCCATGAATGGATTGCTAACAATCTCCGAGCAGCCACCGGCGGTTCGTCTACCTACCAGACTTGTACAATTGCTGTTCCTTTCTTCGCTTTCAGACAAGGGTTTTACACAGTCACTTGCCACCCTAAGAACATCGAGCACATTCTCCGAACTCGGTTCGACAATTACCCGAAGGGACCCACGTGGCAAACCGCCTTTCATGACCTTCTAGGCCAAGGGATCTTCAACAGTGATGGAGAGACATGGCTCTTGCAACGTAAAACTGCAGCGTTGGAGTTCACTACGAGGACGCTACGTTTAGCCATGGCTCGGTGGGTTAATCGAACAATCAAGACTAGACTGTGGTGTATTTTGGACAAGGCTGCGGATGAGAACTCATCAGTAGATTTGCAGGACTTGTTGCTTCGTTTAACTTTTGATAATATTTGTGGATTAACCTTTGGCAAGGACCCTGAAACTCTCTCTCTTGATTTGCCTGAGAATCCATTTGCTATGGCGTTTGACACGGCCACTGAAGCGACTTTGCAGCGGCTTCTTTACCCTGGTTTCTTATGGAGGATTGAGAAACTTTTGGGAATTGGCAGAGAGAGGAGGTTGAAGAAGAGTCTGAAAATCGTAGAAAATTACATGAACGACGCCATTGATGCTCGAAAGGAAGCTCCTTCTGACGATTTGCTCTCTCGTTTCTTGAAAAAGCGAGATTTGAGTGGAAATCTCTTCCCCGTGGCTGTTCTCCAACGTATTGCTTTAAATTTCGTCCTCGCCGGCCGGGACACATCCTCCGTCGCTCTCAGCTGGTTCTTCTGGCTAGTCATGAACCACCCCAGAGTGGATGAGAAGATCATCAAAGAGATATCAACAGTTCTGAAAGAAACACGTGGCGAAGATCAAAGCAAATGGACGGAGGATCCTCTGGTATTCGACGAGGTTGATCGGCTCGTTTATCTCAAAGCTGCATTAGCTGAGACGCTGCGTCTTTATCCTTCTGTACCGGAAGACTTCAAATACGTCGTCTCCAACGATACATTACCTGACGGTACGTTCGTGCCGGCCGGTTCGACGGTGACGTATTCGATATATTCAGTGGGAAGGATGAAAACCATATGGGGGGAGGACTGCTTAGAGTTCAAACCGGAAAGGTGGCTGACAGAAGACGGCAGGCGGTTCGAGACGCCGAAAGATGGGTATAAATTTGTAGCCTTTAACGCGGGTCCAAGGACATGTTTGGGGAAGGACCTGGCATACCTGCAGATGAAATCTGTGGCGTCGGCCATTCTCCTCCGGTACCGGCTATCTCCAGCTCCTGGTTGCCTCGTCGAGCAGAAGATGTCTCTGACGCTGTTCATGAAAAATGGTCTCCGCATTCTGTTGCAACCCCGTCATCTGTGA 4041 46.97 MFIMSSVESVSPFIYKKFHFESNYNLRYCNGLGFARCQSRLFRQNFTRFVANSVCFSSLNLHRRAVSRNSEKFNLWGGVARGFCLGETKISANSRDGDSTASPSENSEAKAGDSQGVNKSSASSGSSASNRKREKQGKGGWWWSKGGKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPLPGSEPRTPTTFVTVSYSDFLSKINANQVHKVEVDGVHIMFKLKSEPSNLESEVLSANKLQESESLIKSVAPTKRIVYTTTRPSDIKTPYEKMLDNEVEFGSPDKRSGGFFNSALIALFYVAVLAGLLHRFPVTFSQHSAGQFRNRKSGGSGGAKVSEQGETVTFADVAGVDEAKEELEEIVEFLRNPDRYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDRMGREAILKVHVFKKELPLGEDVNLSHIASMTTGFTGADLANLVNEAALLAGRKNKLVVEKIDFIQAVERSIAGIEKKTAKLQGSEKAVVARHEAGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTSEDRYLLFIDELRGRLVTLLGGRAAEEVIYSGRVSTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIATLSGGGMDDSGAIPWGRDQGHLVDLVQREVKMLLQSALDIALYVVRANPAVLEGLGAQLEDKEKVEGEELEEWLKMVVAPKELTIFIRGKGKQESLLPLQTIRSPFFYALLEMETLVLFLSLSTALSAYFFWFYLLTKKLSGPKVWPVIGSLPELFANRERIHEWIANNLRAATGGSSTYQTCTIAVPFFAFRQGFYTVTCHPKNIEHILRTRFDNYPKGPTWQTAFHDLLGQGIFNSDGETWLLQRKTAALEFTTRTLRLAMARWVNRTIKTRLWCILDKAADENSSVDLQDLLLRLTFDNICGLTFGKDPETLSLDLPENPFAMAFDTATEATLQRLLYPGFLWRIEKLLGIGRERRLKKSLKIVENYMNDAIDARKEAPSDDLLSRFLKKRDLSGNLFPVAVLQRIALNFVLAGRDTSSVALSWFFWLVMNHPRVDEKIIKEISTVLKETRGEDQSKWTEDPLVFDEVDRLVYLKAALAETLRLYPSVPEDFKYVVSNDTLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLTEDGRRFETPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVASAILLRYRLSPAPGCLVEQKMSLTLFMKNGLRILLQPRHL 1346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 38012582 38020669 + BLOR12347 Blo03g01166 58630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01166 1346 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 297 796 IPR005936 GO:0004176|GO:0004222|GO:0016020
Blo03g01166 1346 CDD AAA 351 517 - -
Blo03g01166 1346 Pfam ATPase family associated with various cellular activities (AAA) 384 517 IPR003959 GO:0005524|GO:0016887
Blo03g01166 1346 Gene3D - 519 595 - -
Blo03g01166 1346 PRINTS E-class P450 group I signature 1128 1145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01166 1346 PRINTS E-class P450 group I signature 1148 1174 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01166 1346 PRINTS E-class P450 group I signature 1282 1292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01166 1346 PRINTS E-class P450 group I signature 1201 1219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01166 1346 PRINTS E-class P450 group I signature 1292 1315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01166 1346 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 7, CHLOROPLASTIC 35 817 - -
Blo03g01166 1346 Pfam FtsH Extracellular 163 284 IPR011546 GO:0004176|GO:0004222|GO:0005524|GO:0008270|GO:0016021
Blo03g01166 1346 SMART AAA_5 380 520 IPR003593 -
Blo03g01166 1346 Gene3D - 327 516 IPR027417 -
Blo03g01166 1346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 343 590 IPR027417 -
Blo03g01166 1346 Pfam Peptidase family M41 603 795 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Blo03g01166 1346 Gene3D Peptidase M41 596 802 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Blo03g01166 1346 ProSitePatterns AAA-protein family signature. 488 506 IPR003960 GO:0005524|GO:0016887
Blo03g01166 1346 Gene3D - 193 289 - -
Blo03g01166 1346 SUPERFAMILY FtsH protease domain-like 604 797 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Blo03g01166 1346 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 1285 1294 IPR017972 GO:0005506|GO:0016705
Blo03g01166 1346 MobiDBLite consensus disorder prediction 93 141 - -
Blo03g01166 1346 Pfam AAA+ lid domain 542 584 IPR041569 -
Blo03g01166 1346 Gene3D Cytochrome P450 859 1345 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01166 1346 SUPERFAMILY Cytochrome P450 854 1344 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01166 1346 PANTHER METALLOPROTEASE M41 FTSH 35 817 - -
Blo03g01166 1346 PRINTS P450 superfamily signature 1202 1213 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01166 1346 PRINTS P450 superfamily signature 1283 1292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01166 1346 PRINTS P450 superfamily signature 1139 1156 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01166 1346 PRINTS P450 superfamily signature 1292 1303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01166 1346 MobiDBLite consensus disorder prediction 93 130 - -
Blo03g01166 1346 Pfam Cytochrome P450 920 1333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01166 1346 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 40 811 IPR005936 GO:0004176|GO:0004222|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00228 Blo-Chr3:5091469 Blo03g01166 Blo-Chr3:38012582 0 dispersed
Blo03g01166 Blo-Chr3:38012582 Blo10g00110 Blo-Chr10:1132274 2.16E-130 dispersed
Blo03g01166 Blo-Chr3:38012582 Blo04g00702 Blo-Chr4:6440244 5.50E-120 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01166 K03798 - jre:109007642 1237.25