Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01167 ATGGCGACCAACATGGGATCCATTTTCAACAAGTTTTTCTCCCTCTTAATCTTAATTCTTCATGTTGGTTGCTTTATCTTGACCAACCCTACTTTAAACCGCCATAGCCGCAAACTAAGCTCGCCATCCGAATCAAAACAGCGCAAGTTTTTCTTCAAACCTAACAAAGCTTTCTCCTCTTCTTTCTCTTTCCTCAAAACCATCTTCTCCTCCTCCCAGGCCTGCAAATCAGTTAACATAATCCCGCCCTACACAACACCCCCATCCTCCCACCAATCCACAGTTTCCTCACGACTGCCTGAGCTTGATTCCTCCGACATTCTGATTAAAAAATCAACCGGGTCTTGCCTGGATTCCGATATCTCGGCCGAGAATCCATTCTCACCCCTCAGAAACGATATCTTCCCCTGCACAGTTTGCGGCGAGATTTTTTCGAAATCTTACCTGCTCGAACAGCATCAAGCTATGAAACATGCTGTTTCGGAGCTTACTGATGGAGATACGGGCAAAAACATAGTCAAAATCATATTCAAGACGGGTTGGACCAGTAATGAAAAGACCCCGAAAATCAGTCGGATCCTCAAAGTTCACAACAGCCAAAAGATACTGTCGAGATTCGAAGAGTACAGAGAGACAGTAAAGATCAAGGCAGCACGAAACGGCAGCGTTAGGAGGAGAGACGAGAGGTGTATTGCCGATGGAAATGAGCTTCTGAGGTTTCACTGCTCTACTTTTGCGTGTGACTTAGGAGTCAACGGTGACTCCAGCCTCTGCGGCCAGGAATTTTGTAATGTTTGCGAGATAATAAAATCAGGGTTCTCGCCCAAATTGGACGGAATTTCGACGGTGTCAAGCAGCTGGAGGGCACACGCGTCGTTGCCGGAGGGGGTGGAGGAGGAGTTCAAGTTCATGAACGTGAAGCGGGCGGTGATGGTGTGTCGGGTGGTAGCGGGTCGGGTTGGGGGTGAAGCGGAGGAGGCGGAGAAGGGGGATGGAGGGTTTGATTCGGTGGTTGGGAGAAAAGGGAGTGGGACCGACGTAAGGTTTGACGAAGAGGAATTAGTGGTGTTTAGTCCAAGGGCCGTGCTGCCTTGCTTTGTGATCGTCTACACCGTCTGA 1119 48.97 MATNMGSIFNKFFSLLILILHVGCFILTNPTLNRHSRKLSSPSESKQRKFFFKPNKAFSSSFSFLKTIFSSSQACKSVNIIPPYTTPPSSHQSTVSSRLPELDSSDILIKKSTGSCLDSDISAENPFSPLRNDIFPCTVCGEIFSKSYLLEQHQAMKHAVSELTDGDTGKNIVKIIFKTGWTSNEKTPKISRILKVHNSQKILSRFEEYRETVKIKAARNGSVRRRDERCIADGNELLRFHCSTFACDLGVNGDSSLCGQEFCNVCEIIKSGFSPKLDGISTVSSSWRAHASLPEGVEEEFKFMNVKRAVMVCRVVAGRVGGEAEEAEKGDGGFDSVVGRKGSGTDVRFDEEELVVFSPRAVLPCFVIVYTV 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 38026367 38027485 + BLOR12348 Blo03g01167 58631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01167 372 PANTHER NUCLEIC ACID BINDING PROTEIN 3 371 - -
Blo03g01167 372 SUPERFAMILY ADP-ribosylation 161 371 - -
Blo03g01167 372 Gene3D - 160 371 - -
Blo03g01167 372 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 371 - -
Blo03g01167 372 ProSiteProfiles Zinc finger C2H2 type domain profile. 135 163 IPR013087 -
Blo03g01167 372 ProSitePatterns Zinc finger C2H2 type domain signature. 137 158 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01167 Blo-Chr3:38026367 Blo17g00187 Blo-Chr17:1909693 1.58E-65 dispersed
Blo03g01167 Blo-Chr3:38026367 Blo11g00062 Blo-Chr11:482278 3.04E-64 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12166 None None None None Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01167 - - qlo:115989317 453.366