Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01176 ATGTCTTGTTCCATCGCCGTTTTGAATTCCCCGGGCTTTTCTCCCTCATCCTCCCTCTTCTGTAACAAAACCTCTGTTCTTTCGCCTTCCCATGAAAATTTAGCTTTGTCTTTAGTCCAACGACCTTCCTCTTCTCCTTCTCCATCTTCCCCTTCCTCGCCTTTTCGTCTTCGTCTGTCCAAACCCCCAATTCCCCTTTCTTCTTCTGCCCCTTCCGCTTCATCGCCTCCCTCCGCTTCTTCATCCTCGCCTCCCATTTCCGTTCTCAAGAGAAAACGTCCCACCAGGTTGGACATTCCGGTGGCCTCTTCGACCTTTGGCGTCCCGGCTACCCCCTTGTCGGCAGCAAGGATGGACGTGGTTGAGGCTGACACAGATGGATATTCTGTCTACTGCAAGAGAGGGAGGAGAGAAACAATGGAGGACCGATTCTCTGCTCATCTCAATCTCCAAGGAGATCCTAAACAGGCCCTTTTTGGTATCTTCGATGGGCATGGAGGTGCTAAAGCTGCTGAATATGCTTCAGAAAACTTAGGGAAGAACGTGATAGATGAAATAGCGAGGAGGCATGAGGATGACATCGAGCAGGCTGTTAGGCATGGTTACCTCAATACAGATTCGAATTTCTTGAAAGAGGATCATTCCCGTGGTGGGTCTTGTTGTGTGACAGCTCTGATCAGAAAAGGCAACCTTATAGTTTCCAATGCGGGGGACTGCCGAGCTGTAATGAGCATATCTGGAGTTGCAGAGGCCATAACTTCCGACCACCGGCCCTCTAGACCAGATGAAAAAGACAGAATTGAGAGCATGGGTGGATACGTGGACTTGTGCCATGGTGTATGGAGAATTCAGGGATGTTTGGCTGTATCAAGAGGAATTGGCGATCGCTACCTTAAAAAATGGGTAATAGCAGAACCAGAGACTAAGCTGATAAAGATCCAATCTCAACATGAGTTCTTAATCTTGGCTTCCGATGGCCTGTGGGATAAGGTTAGTAATCAAGAGGCTGTTGACATTGCTCATCCGTTTTGTGCCGGATCCGATAAGCCGGAGCCATTGTTTGCCTGCAAAAAGCTGGCCGAGCTTTCTGCTTCGAGAGGATCCACTGATGATACGAGTGTGATGATAATACAATTGCCCCAGTACGTATGA 1152 48.7 MSCSIAVLNSPGFSPSSSLFCNKTSVLSPSHENLALSLVQRPSSSPSPSSPSSPFRLRLSKPPIPLSSSAPSASSPPSASSSSPPISVLKRKRPTRLDIPVASSTFGVPATPLSAARMDVVEADTDGYSVYCKRGRRETMEDRFSAHLNLQGDPKQALFGIFDGHGGAKAAEYASENLGKNVIDEIARRHEDDIEQAVRHGYLNTDSNFLKEDHSRGGSCCVTALIRKGNLIVSNAGDCRAVMSISGVAEAITSDHRPSRPDEKDRIESMGGYVDLCHGVWRIQGCLAVSRGIGDRYLKKWVIAEPETKLIKIQSQHEFLILASDGLWDKVSNQEAVDIAHPFCAGSDKPEPLFACKKLAELSASRGSTDDTSVMIIQLPQYV 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 38069176 38070753 + BLOR12357 Blo03g01176 58640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01176 383 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 3 382 - -
Blo03g01176 383 PANTHER PROTEIN PHOSPHATASE 2C 3 382 IPR015655 GO:0004722|GO:0006470
Blo03g01176 383 MobiDBLite consensus disorder prediction 38 56 - -
Blo03g01176 383 SUPERFAMILY PP2C-like 126 380 IPR036457 -
Blo03g01176 383 Gene3D - 127 382 IPR036457 -
Blo03g01176 383 SMART PP2C_SIG_2 139 379 IPR001932 -
Blo03g01176 383 MobiDBLite consensus disorder prediction 65 88 - -
Blo03g01176 383 Pfam Protein phosphatase 2C 128 371 IPR001932 -
Blo03g01176 383 CDD PP2Cc 127 379 IPR001932 -
Blo03g01176 383 SMART PP2C_4 115 377 IPR001932 -
Blo03g01176 383 ProSiteProfiles PPM-type phosphatase domain profile. 127 379 IPR001932 -
Blo03g01176 383 MobiDBLite consensus disorder prediction 38 94 - -
Blo03g01176 383 ProSitePatterns PPM-type phosphatase domain signature. 158 166 IPR000222 GO:0043169
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00382 Blo-Chr1:4371285 Blo03g01176 Blo-Chr3:38069176 2.02E-61 dispersed
Blo03g01176 Blo-Chr3:38069176 Blo17g00260 Blo-Chr17:2646590 1.93E-71 dispersed
Blo13g00800 Blo-Chr13:30736880 Blo03g01176 Blo-Chr3:38069176 4.78E-124 wgd
Blo03g01176 Blo-Chr3:38069176 Blo04g00226 Blo-Chr4:1763274 3.71E-126 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01176 K17506 - mnt:21390990 508.064