Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01197 ATGAGCAGACTTGTGAGCCTAGCGGGCTGGGCTGCCAAGCCAGCCTGCCAGCCACCACTGGACGTTGGTGAGTGTCGGAAATGCGTAGGCTTAGCTGGATGGGCTGGTGTCGTCGTGGTCAAAACGATTGACCAAACTGTTGTGAACAGGGCTGGGACCCATCGCCATGAGCGTTCGTGCGATCCATTTTCCTTCCTTTGTGGTGCTCTGCTTGTCTCACCCACTTCTAAACTCACTCCCCCATTTCATATGGGCCACCTCTTTCTGATTTCTACTTCATCTTTTCTCATCATCAGGTTCATTACAGCAAGACCATCAAGAGGTCAGAATCAAGAAAGTCTCACTCTTGGCGGTGGGATGTTTCTTTGTTGTATGGGAGAAACTCCTGGTTTAATCTCGCATTTAGCTTCCTTACTGTCGACACTAACTGAACGATGGTTGATATCAGAGATGGACCAAAGCGTCAAACAAATGTTGAAGATGATAGAGGAGGATGCAGATTCATTTGCCAAGAAGGCTGAGATGTATTATCAGAAGAGACCAGTGTTGATCTCTCATGTCGACGACTTCTACCGCTTATACCGATCTCTAGCAGAACGCTACGATTGTCTGACGGGAGAATTGAGGAAGAACGTAACATCAGATCTCCAATCTCAATCTTCCAGTATTTCTGACATTCTCTCTGAACCATCCTCTGCCCTTACCTCTCCTGATCATCTGATTGGGCAACGTAGATCCAGTAATCGGGCAGCTGGATTTGATTTCTTCCTTGGGTCTGGTGGAAGCAACTCTGACATTTACCAAAGAGAAGGGGGCGGATCCTCTTCCTTAACGGATTCTGAACCAGAATCTGATGATTTATCGGTAAAAAATTATGCTTCTGCAATTGCAAATGACGGGGATCAGAGGCTGAGCAGGAAGATGATCGAGTTGGATCCTGAAGTGAAGGAAAAGCTTCAGATGGAACATGAAGAGAATGCCAATGGCTCATTTGGAGAACGGCCAAGTGAGAAATCTGAAGATCTTCTAGCTAAAATAGTAGGATATGAGGAAGAGCTCAGGATTGCTCATGAAAAGGTAAGGAATTCTGCAGCAGAAATCATGAAGTTGAAGACTGAGCTCCAACAATTTAAGGTAGAAACTGCTTCTGAGGTGGCCGAATCTGACAAAGAGAGTAACAAGGCATTGGAGCTTGACAAAAAGGTTTGCTTGGACATGGATGGAAGGTTTAAGGAAGTTGCAGAAGAGCTGAATATCACGAAGGAAAAGCTCAAGAATTCCGAGAAGGAGATTAGTCGTTTAAAGCTTGAAATCAAGGAAAATAGATCATCTGTAGAAACCCACAAGTTGCAAGATCAGTTTGAAGTGGCCAAGAAAGAGACAGGCATTTGGAAAGCAAAGCTTAACGCAGACAAAAGAGAGGTGTTCAAGCTGCAGGAAAGGATTGCAAGACTAAAAACAAGTTTATCAGACCGAGATCACGAGATCAGGGATTTGAAAACAGCAGTGTCAGATGCGGAGCAGAAAATATTTCCTGAAAAAGCACAGGTAAAGGCTGAAATCGCCAGGTTATCAGAGGAAGTGAATGTTTTGAAAGAGCAGATCAGAGATTGGGAATGCGGTGCAAGATCCTGGGAGGAAGAGATTAAAAAAGTGAGGAGGGAGAAAGCAGAGGGGGAGGAGAGGTTGAAGATGAACATTGTGAAGTTGGAGGCAGACCTCGCTGACCAGAGGGAATCCATGAAAAATCTGGAGAAGAGTAGCAATGAGTTAAAATCAGAAAGAGAGAAGATTCAAAGGGAGGTGGATGATTTAAGAGAGAAGACGGGAGAGCATTTGGAGCAGCTACTCAAGGAACGAGAGGAAAGAAGAGCAGGGGCAGAGAGAGTGGAAAGTGAGCTGAGACGCAGAGTGAAGGAAATGGAGGAGGAGATAGAGAAGCAAAGAGTAGCAATAAATGAAGGAGCAGAGGAGAAACGAGAAGTGATAAGGCAGCTTTGTTTCTCGCTGGAGCATTACAGGAAAGACCATCACAGGCTACGACAACAAAGGGGGTTAGGGTTTCGATCTTATGATTTGCTTGACTTTCAAGTTTATTTTAGCTTGATGGGTACCACGATTTGCATGAATGCTTCTTGTGGGGTGACTACCTCCAACGACGGTAAAAGAGGATGGCCTCTACGATCCGGCGGATTTGCACTTCTCTGCCATAAGTGCGGATCTGCTTATGAGAGTTTAATATTCTGTGACACGTTTCACTTAGAAGAAACTGGTTGGAGGGATTGCACTTTATGTGGCAGGCATATCCACTGTGGATGTATAGCCTCTAAGTCTTTGTTTGAGTGCCTTGATTATGGAGGTGTTGGTTGTATTACCTGCATGAAAGGTTCTCAATTTCATCTGATGCAGAGAGGTGAAATTCCTAATGGATTTGCTACATTGATGACGATGCAAAATGTTGGTGATTTTCAGTGTACTTCAGTTGAAAATAGTGTTAATGGGGATATTGGTGAAGCAAATCTTTTTCAGTTGTGTAAAATCGTTGAGGCCAATGGAAACAGCCTCCTATCCCCATCTCGGAGAGTTGACATAAGTGCATCTCTTGGTCCCAGTGTAAGAGAAAACTTTAGGAGCACATTTGGAGAAGCTGGCATGCGCTCTTCAAATGTTATACAATCTTCTCTTAAATCATCACCATATGAAAATCCTGACAATGGTAAATTCTTCACGGAGGTTAAAAACATTGAAGAATCTCTTGCTCAACCATCCTTAAGTATGAATTTTGGTGCTCCGTCGACATTGCATAACTTGGTACTTCCGTTTTCTTGTGGAGCTGTAGAAGCGAGAGAACAGGGAAACGGACCGTATCCTTTTCAACAGAGCCAAAGATCTCGCCCATTATTGCCTAAGCCACTGAAAAGCAGCGTTACTCCTACAAATTCAGAGACAAACAAGACCATGATTCGTCATATGCGAATTGCTAGACCTCCTGCTGAAGGGCGTGGAAAGAACCAACTACTTCCCCGATACTGGCCAAGGATTACAGATCAAGAGCTCGAGCAACTGTCTGGAGACTTGAATTCCACGATTGTTCCACTATTTGAAAAGGTGTTGAGTGCTAGTGATGCTGGTCGTATTGGTCGTTTAGTTCTTCCCAAAGCATGTGCTGAAGCTTATTTTCCTCCTATTTCTCAATCAGAAGGTCTTCCAATAAGGATTCAAGATGTGAAGGGAAATGAGTGGACATTTCAGTTCAGATTTTGGCCGAACAACAACAGTAGGATGTATGTTTTGGAGGGTGTTACTCCTTGCATACAGTCTATGCAATTACGAGCTGGTGATACTGTCATCTTTAGCCGGATAGATCCTGAAGGCAAACTTGTCATGGGATTTCGAAAAGCAACAAACTCTATAGATCGGCAGGATGGTCAGACTCCTGTCCTTGCTAATGGTTCTCACTTTGGTGAACCATCATATTCTAGCATCATGGATAATTTGCAAACTGAAGCAGATGGAGATTTGCATAAGATAGAGAACCATGGGGATAGCACAAATGACAACCAACTGCAGCGACAAATGCCAGTTGTGGAGAAGAAAAGAGCTCGAAACATAGGGCCAAAAAATAAGAGGTTGCTCATGCATAGTGAGGATGCCCTGGAATTGAGACTGACATGGGAAGAAGCACAGGACTTACTTCGGCCACCACCAAGGGCAAAGCCTAGCATTGTTACCATTGAGGACCATGACTTTGAAGAGTATGATGAACCTCCTATTTTTGGTAAGAGGACTATATTCACTGCCGGCTCATCCAATAGGAGTGAGGAGCAATGGGCTCAGTGTGATGACTGCTCAAAATGGCGGAGATTGCCGGTCGATATTCTTCTGCCTTCAAAGTGGACTTGTTTGGATAACATTTGGGATTCTAACAGGTGTTCATGTTGTGAACCAGAAGAAATAAATCCAAAGGAATTGCACAATCTTCTCAGAGCAAAAAAAGACCATGCAAAGAGAAGAATAATGGAAAAGCAGGAGCCATCTCATGAAGTTGAGCCATCTGGATTAGATGCTCTGGCAAGTGCTGCAGTTCTAGGAGATTATGTGGGTAACTTGCTTGAGCCAGCGGTTGGAGCTACCACTAAACATCCCCGACATCGGCCAGGATGCACTTGCATTGTGTGTATTCAGCCTCCGAGTGGGAAGGGAAAGCACAAAAGCACATGCACATGCAATGTATGTCTGACTGTAAAGCGACGTTTTAAGACCCAAATGTTACGAAAGAAGAAACGCCAATCGGAACGTAAATCAGAAAAAGAAGTAGACGTGGATGGTGGCAGATGCAGAGATGCGGCCGTGCAGGCAAATGAGGCGGCCAACCAAGAAAGCCAGAACAGAATGGAAGGTGATGTGGGTGAAAATAGCAATGGAAAAATAGACTTGAATTGTGACCCAGATCGAGAAGAGGTGCAAGAGGAGATGGGGGGATCAAGCCTCGTTCAATCTGGCAGCCTTCCCTTGGATGGAATTGAAAGGCACAATGCAGTGTCAGGGTTGATAGGCGAGGGAGGTGTTATAGTCCCGTCAAGTTCTGCAGCAGCCTCACTTACACCTCGAGATTGCTACTACGACGGCAGTTCTACATTACTGGACACTTCCACCCCTATTTAG 4665 44.65 MSRLVSLAGWAAKPACQPPLDVGECRKCVGLAGWAGVVVVKTIDQTVVNRAGTHRHERSCDPFSFLCGALLVSPTSKLTPPFHMGHLFLISTSSFLIIRFITARPSRGQNQESLTLGGGMFLCCMGETPGLISHLASLLSTLTERWLISEMDQSVKQMLKMIEEDADSFAKKAEMYYQKRPVLISHVDDFYRLYRSLAERYDCLTGELRKNVTSDLQSQSSSISDILSEPSSALTSPDHLIGQRRSSNRAAGFDFFLGSGGSNSDIYQREGGGSSSLTDSEPESDDLSVKNYASAIANDGDQRLSRKMIELDPEVKEKLQMEHEENANGSFGERPSEKSEDLLAKIVGYEEELRIAHEKVRNSAAEIMKLKTELQQFKVETASEVAESDKESNKALELDKKVCLDMDGRFKEVAEELNITKEKLKNSEKEISRLKLEIKENRSSVETHKLQDQFEVAKKETGIWKAKLNADKREVFKLQERIARLKTSLSDRDHEIRDLKTAVSDAEQKIFPEKAQVKAEIARLSEEVNVLKEQIRDWECGARSWEEEIKKVRREKAEGEERLKMNIVKLEADLADQRESMKNLEKSSNELKSEREKIQREVDDLREKTGEHLEQLLKEREERRAGAERVESELRRRVKEMEEEIEKQRVAINEGAEEKREVIRQLCFSLEHYRKDHHRLRQQRGLGFRSYDLLDFQVYFSLMGTTICMNASCGVTTSNDGKRGWPLRSGGFALLCHKCGSAYESLIFCDTFHLEETGWRDCTLCGRHIHCGCIASKSLFECLDYGGVGCITCMKGSQFHLMQRGEIPNGFATLMTMQNVGDFQCTSVENSVNGDIGEANLFQLCKIVEANGNSLLSPSRRVDISASLGPSVRENFRSTFGEAGMRSSNVIQSSLKSSPYENPDNGKFFTEVKNIEESLAQPSLSMNFGAPSTLHNLVLPFSCGAVEAREQGNGPYPFQQSQRSRPLLPKPLKSSVTPTNSETNKTMIRHMRIARPPAEGRGKNQLLPRYWPRITDQELEQLSGDLNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPIRIQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLRAGDTVIFSRIDPEGKLVMGFRKATNSIDRQDGQTPVLANGSHFGEPSYSSIMDNLQTEADGDLHKIENHGDSTNDNQLQRQMPVVEKKRARNIGPKNKRLLMHSEDALELRLTWEEAQDLLRPPPRAKPSIVTIEDHDFEEYDEPPIFGKRTIFTAGSSNRSEEQWAQCDDCSKWRRLPVDILLPSKWTCLDNIWDSNRCSCCEPEEINPKELHNLLRAKKDHAKRRIMEKQEPSHEVEPSGLDALASAAVLGDYVGNLLEPAVGATTKHPRHRPGCTCIVCIQPPSGKGKHKSTCTCNVCLTVKRRFKTQMLRKKKRQSERKSEKEVDVDGGRCRDAAVQANEAANQESQNRMEGDVGENSNGKIDLNCDPDREEVQEEMGGSSLVQSGSLPLDGIERHNAVSGLIGEGGVIVPSSSAAASLTPRDCYYDGSSTLLDTSTPI 1554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 38216882 38235512 - BLOR12378 Blo03g01197 58661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01197 1554 MobiDBLite consensus disorder prediction 1455 1476 - -
Blo03g01197 1554 SMART B3_2 1034 1134 IPR003340 GO:0003677
Blo03g01197 1554 SUPERFAMILY DNA-binding pseudobarrel domain 1031 1136 IPR015300 -
Blo03g01197 1554 Pfam B3 DNA binding domain 1034 1133 IPR003340 GO:0003677
Blo03g01197 1554 Pfam CW-type Zinc Finger 1276 1319 IPR011124 GO:0008270
Blo03g01197 1554 Gene3D - 1012 1139 IPR015300 -
Blo03g01197 1554 MobiDBLite consensus disorder prediction 1423 1442 - -
Blo03g01197 1554 MobiDBLite consensus disorder prediction 1455 1469 - -
Blo03g01197 1554 Coils Coil 410 444 - -
Blo03g01197 1554 MobiDBLite consensus disorder prediction 954 981 - -
Blo03g01197 1554 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 127 208 IPR011684 GO:0003779
Blo03g01197 1554 MobiDBLite consensus disorder prediction 267 282 - -
Blo03g01197 1554 Gene3D - 390 542 - -
Blo03g01197 1554 Coils Coil 514 658 - -
Blo03g01197 1554 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 705 1506 - -
Blo03g01197 1554 Pfam KIP1-like protein 146 202 IPR011684 GO:0003779
Blo03g01197 1554 MobiDBLite consensus disorder prediction 267 286 - -
Blo03g01197 1554 CDD B3_DNA 1032 1133 IPR003340 GO:0003677
Blo03g01197 1554 MobiDBLite consensus disorder prediction 952 981 - -
Blo03g01197 1554 ProSiteProfiles Zinc finger CW-type profile. 1271 1321 IPR011124 GO:0008270
Blo03g01197 1554 Gene3D - 1267 1320 - -
Blo03g01197 1554 ProSiteProfiles B3 DNA-binding domain profile. 1034 1135 IPR003340 GO:0003677
Blo03g01197 1554 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 705 1506 - -
Blo03g01197 1554 Coils Coil 360 380 - -
Blo03g01197 1554 MobiDBLite consensus disorder prediction 219 239 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01197 Blo-Chr3:38216882 Blo08g00183 Blo-Chr8:2085505 1.26E-162 dispersed
Blo16g00309 Blo-Chr16:7637124 Blo03g01197 Blo-Chr3:38216882 9.71E-16 dispersed
Blo09g00301 Blo-Chr9:12804074 Blo03g01197 Blo-Chr3:38216882 0 transposed
Blo13g00825 Blo-Chr13:30962417 Blo03g01197 Blo-Chr3:38216882 1.13E-24 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12169 PF02362 B3 6.90E-16 CL0405 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01197 - - tcc:18591094 1028.08