Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01202 GTCTCCCCCATGGCTGCTGAGGTGACCAGCAATTTCGCCAATCCGGAGTTTCGTCCGATTCCGTCTCCACCGAATTTGCATTCCCAAACTGAGCACTATACTGCACATACGCACGAAGGTCTCCAGTTCTGGCAGTTGATGATTGCCGGTTCTGTCGCCGGTTCCGTCGAGCATATGGCCATGTTCCCCGTGGATACCATCAAGACGCGTATGCAAGCTCTCAGTTCTTGCCCCATCAAATCGGTTGGCGTTCGACAATCTCTTCGCTCAATTTTGAAGTCCGAGGGCCCCGCTGGTCTCTACCGCGGGATTGCTGCAATGGGTCTTGGCGCCGGACCGGCTCACGCTGTTTATTTTTCTGTTTATGAAAACTGCAAGAAGTTTTTCTCTGGTGGGAATCCAAACAATTCTGCTGCCCACGCTGTTTCCGGCATGTGCGCAACGGTGGTCAGCGATGCAGTTTTTACGCCAATGGATATGGTGAAGCAGAGACTACAGTTGGGTAACAGCCCATATAAAGGTGTTTGGGATTGTGTGAAGACGGTTCTGAGAGAGGAGGGATTTGGTGCATTCTATGCTTCTTACAGGACTACTGTGCTCATGAATGCGCCGTTTACTGCTGTACATTTTACAACGTACGAGGCTGCAAAGAGAGGGTTGATGGAGATCTCGCCTGAGAGCGCCAATGATGAAGGGTGGGCTGTTCATGCTACGGCTGGTGCTGGAGCAGGGGCCTTGGCTGCCCTTCTCACGACACCACTCGACGTAGTCAAAACTCAATTACAATGCCAGGGGGTATGTGGATGTGATAGATACAGAAGTAGTTCAATTGGGGAAGTCTTCCGAACAATCTTGAAGAAAGATGGATGTAAAGGGCTTGTCAGAGGATGGACTCCAAGGATGCTTTTTCATGCTCCCGCTGCAGCAATTTGCTGGTCTACATATGAAGCCTCAAAATCCTTCCTCCAAGAACTCAATGGCGGCTCAGTCACT 993 50.76 VSPMAAEVTSNFANPEFRPIPSPPNLHSQTEHYTAHTHEGLQFWQLMIAGSVAGSVEHMAMFPVDTIKTRMQALSSCPIKSVGVRQSLRSILKSEGPAGLYRGIAAMGLGAGPAHAVYFSVYENCKKFFSGGNPNNSAAHAVSGMCATVVSDAVFTPMDMVKQRLQLGNSPYKGVWDCVKTVLREEGFGAFYASYRTTVLMNAPFTAVHFTTYEAAKRGLMEISPESANDEGWAVHATAGAGAGALAALLTTPLDVVKTQLQCQGVCGCDRYRSSSIGEVFRTILKKDGCKGLVRGWTPRMLFHAPAAAICWSTYEASKSFLQELNGGSVT 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 38308074 38309228 - BLOR12383 Blo03g01202 58666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01202 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 41 128 IPR018108 -
Blo03g01202 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 231 321 IPR018108 -
Blo03g01202 331 SUPERFAMILY Mitochondrial carrier 40 316 IPR023395 -
Blo03g01202 331 Gene3D Mitochondrial carrier domain 23 170 IPR023395 -
Blo03g01202 331 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 4 327 - -
Blo03g01202 331 MobiDBLite consensus disorder prediction 8 30 - -
Blo03g01202 331 PRINTS Mitochondrial carrier protein signature 46 59 IPR002067 GO:0055085
Blo03g01202 331 PRINTS Mitochondrial carrier protein signature 192 210 IPR002067 GO:0055085
Blo03g01202 331 PRINTS Mitochondrial carrier protein signature 240 262 IPR002067 GO:0055085
Blo03g01202 331 PRINTS Mitochondrial carrier protein signature 150 168 IPR002067 GO:0055085
Blo03g01202 331 PRINTS Mitochondrial carrier protein signature 59 73 IPR002067 GO:0055085
Blo03g01202 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 135 219 IPR018108 -
Blo03g01202 331 Pfam Mitochondrial carrier protein 136 222 IPR018108 -
Blo03g01202 331 Pfam Mitochondrial carrier protein 41 131 IPR018108 -
Blo03g01202 331 Pfam Mitochondrial carrier protein 231 324 IPR018108 -
Blo03g01202 331 Gene3D Mitochondrial carrier domain 171 330 IPR023395 -
Blo03g01202 331 PANTHER MITOFERRIN-1-RELATED 4 327 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01202 Blo14g00065 CCT
Blo03g01202 Blo13g01027 CCT
Blo03g01202 Blo14g00065 ECH
Blo03g01202 Blo13g01027 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01202 Blo-Chr3:38308074 Blo11g00315 Blo-Chr11:2550858 4.40E-13 dispersed
Blo13g01027 Blo-Chr13:32612166 Blo03g01202 Blo-Chr3:38308074 2.92E-11 wgd
Blo14g00065 Blo-Chr14:491162 Blo03g01202 Blo-Chr3:38308074 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01202 K15113 - qsu:112000477 520.39