Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo03g01204 | ATGTCCGCTTCAGCGACTCAGCAATTTTTCTCTCTGCTAAAGAATCGAAGGCTCGATGATGCGACTTTCCGAATTCTGGAATCTGTTTCGGTTCGTGAAGATGTGAATGCTTTACTGGAGATTATGTCTGGCTTGAAAACGTTCTTGCGATCTGAATTACTCTCTGTTATCCGAGATGCTGCAGAGAAGTCAGTTGAGCAAAAGCTTTTAGTGCTCGATTTTTTCGGTCGCGCTTTTGCTCTTGTAGGCGACAGTTGCTTGGCTTTGCGATATGAGGCCTTAATTTTGCGGGAACTCGAGTCAGGGAGTAATCCATTGTTACAAGTTTCATGCACGGAATGGATAAAATTTGCTGAGCATTCACTGGACGCTGGTTTTTTCTCTATCACCGGGAAGGCTTGTGAGAATGCACTGTCATGCCTTCCTTGGAACGTCGCTTCAGACCCACCAACCACTGAGCCTATTGAAGTTTTTCACGTTATTGAAAAAATCAAAAGGCTAAAAAATTTAGCTTTATCATCAGTTGCTTCGCATTCTGCTAAAACAATGGTGGGTCCTTCACCCTGTGCTTCCTGCAAATTGCTAAGGCGTCGATGTGCTCAGGACTGCATATTCGCCCCCTATTTCCCTTCCTCCGACCCCCACAAATTCGCCATTGTTCACAAGGTCTTTGGCGCCAGCAATGTCAGCAAAATGCTCCAGGAGCTTCCAGTGGATCAAAGGGCGGATGCTGCCAGTAGTTTGGTTTACGAAGCAAATGCAAGAACGATGGACCCTGTTTATGGATGCGCCGGGGCCATCTCCTTCCTTCAAAATCAAGTCTCCCAGTTGAAAAAGCAGTTGACTTTAGCTCAGGCCGAGATTCTCTGCATCAAGATGCAGCGAGACCCTACCTTGCATTTCCAAAATGAAACGTCGTTTCTTCTTTCCCCCTCCAACCACTTGAACTCTTTTTCTCAGTGCCTTAGCTATGCTTCTTCTTCTTCTTCTTCTTGCGGTGTATTCCAAGATTCTCTCAAACAAGAGTCTCGTTGGAGTTGA | 1041 | 45.82 | MSASATQQFFSLLKNRRLDDATFRILESVSVREDVNALLEIMSGLKTFLRSELLSVIRDAAEKSVEQKLLVLDFFGRAFALVGDSCLALRYEALILRELESGSNPLLQVSCTEWIKFAEHSLDAGFFSITGKACENALSCLPWNVASDPPTTEPIEVFHVIEKIKRLKNLALSSVASHSAKTMVGPSPCASCKLLRRRCAQDCIFAPYFPSSDPHKFAIVHKVFGASNVSKMLQELPVDQRADAASSLVYEANARTMDPVYGCAGAISFLQNQVSQLKKQLTLAQAEILCIKMQRDPTLHFQNETSFLLSPSNHLNSFSQCLSYASSSSSSCGVFQDSLKQESRWS | 346 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 38313917 | 38318861 | - | BLOR12385 | Blo03g01204 | 58668 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo03g01204 | 346 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 184 | 309 | - | - | |
Blo03g01204 | 346 | Coils | Coil | 267 | 287 | - | - | |
Blo03g01204 | 346 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 12-LIKE | 184 | 309 | - | - | |
Blo03g01204 | 346 | Pfam | Lateral organ boundaries (LOB) domain | 188 | 285 | IPR004883 | - | |
Blo03g01204 | 346 | ProSiteProfiles | LOB domain profile. | 187 | 288 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g01204 | Blo-Chr3:38313917 | Blo13g00804 | Blo-Chr13:30805934 | 1.23E-67 | dispersed | |
Blo16g00357 | Blo-Chr16:10667141 | Blo03g01204 | Blo-Chr3:38313917 | 8.49E-09 | dispersed | |
Blo03g01196 | Blo-Chr3:38213320 | Blo03g01204 | Blo-Chr3:38313917 | 1.25E-40 | wgd | |
Blo03g01204 | Blo-Chr3:38313917 | Blo04g00218 | Blo-Chr4:1690897 | 3.29E-69 | wgd | |
Blo03g01204 | Blo-Chr3:38313917 | Blo04g00196 | Blo-Chr4:1563536 | 1.73E-42 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12170 | PF03195 | LOB | 1.90E-40 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo03g01204 | - | - | pmum:103336266 | 371.703 |