Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01204 ATGTCCGCTTCAGCGACTCAGCAATTTTTCTCTCTGCTAAAGAATCGAAGGCTCGATGATGCGACTTTCCGAATTCTGGAATCTGTTTCGGTTCGTGAAGATGTGAATGCTTTACTGGAGATTATGTCTGGCTTGAAAACGTTCTTGCGATCTGAATTACTCTCTGTTATCCGAGATGCTGCAGAGAAGTCAGTTGAGCAAAAGCTTTTAGTGCTCGATTTTTTCGGTCGCGCTTTTGCTCTTGTAGGCGACAGTTGCTTGGCTTTGCGATATGAGGCCTTAATTTTGCGGGAACTCGAGTCAGGGAGTAATCCATTGTTACAAGTTTCATGCACGGAATGGATAAAATTTGCTGAGCATTCACTGGACGCTGGTTTTTTCTCTATCACCGGGAAGGCTTGTGAGAATGCACTGTCATGCCTTCCTTGGAACGTCGCTTCAGACCCACCAACCACTGAGCCTATTGAAGTTTTTCACGTTATTGAAAAAATCAAAAGGCTAAAAAATTTAGCTTTATCATCAGTTGCTTCGCATTCTGCTAAAACAATGGTGGGTCCTTCACCCTGTGCTTCCTGCAAATTGCTAAGGCGTCGATGTGCTCAGGACTGCATATTCGCCCCCTATTTCCCTTCCTCCGACCCCCACAAATTCGCCATTGTTCACAAGGTCTTTGGCGCCAGCAATGTCAGCAAAATGCTCCAGGAGCTTCCAGTGGATCAAAGGGCGGATGCTGCCAGTAGTTTGGTTTACGAAGCAAATGCAAGAACGATGGACCCTGTTTATGGATGCGCCGGGGCCATCTCCTTCCTTCAAAATCAAGTCTCCCAGTTGAAAAAGCAGTTGACTTTAGCTCAGGCCGAGATTCTCTGCATCAAGATGCAGCGAGACCCTACCTTGCATTTCCAAAATGAAACGTCGTTTCTTCTTTCCCCCTCCAACCACTTGAACTCTTTTTCTCAGTGCCTTAGCTATGCTTCTTCTTCTTCTTCTTCTTGCGGTGTATTCCAAGATTCTCTCAAACAAGAGTCTCGTTGGAGTTGA 1041 45.82 MSASATQQFFSLLKNRRLDDATFRILESVSVREDVNALLEIMSGLKTFLRSELLSVIRDAAEKSVEQKLLVLDFFGRAFALVGDSCLALRYEALILRELESGSNPLLQVSCTEWIKFAEHSLDAGFFSITGKACENALSCLPWNVASDPPTTEPIEVFHVIEKIKRLKNLALSSVASHSAKTMVGPSPCASCKLLRRRCAQDCIFAPYFPSSDPHKFAIVHKVFGASNVSKMLQELPVDQRADAASSLVYEANARTMDPVYGCAGAISFLQNQVSQLKKQLTLAQAEILCIKMQRDPTLHFQNETSFLLSPSNHLNSFSQCLSYASSSSSSCGVFQDSLKQESRWS 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 38313917 38318861 - BLOR12385 Blo03g01204 58668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01204 346 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 184 309 - -
Blo03g01204 346 Coils Coil 267 287 - -
Blo03g01204 346 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 184 309 - -
Blo03g01204 346 Pfam Lateral organ boundaries (LOB) domain 188 285 IPR004883 -
Blo03g01204 346 ProSiteProfiles LOB domain profile. 187 288 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01204 Blo-Chr3:38313917 Blo13g00804 Blo-Chr13:30805934 1.23E-67 dispersed
Blo16g00357 Blo-Chr16:10667141 Blo03g01204 Blo-Chr3:38313917 8.49E-09 dispersed
Blo03g01196 Blo-Chr3:38213320 Blo03g01204 Blo-Chr3:38313917 1.25E-40 wgd
Blo03g01204 Blo-Chr3:38313917 Blo04g00218 Blo-Chr4:1690897 3.29E-69 wgd
Blo03g01204 Blo-Chr3:38313917 Blo04g00196 Blo-Chr4:1563536 1.73E-42 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12170 PF03195 LOB 1.90E-40 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01204 - - pmum:103336266 371.703