Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo03g01226 | ATGACGGAGATTTTCCGCTCGGTGATGAGTGAGGGCGACATGAAACGTGCTGCCAGCCCGAGGAGGGCGATGGAGAAAGAGTGGATTGAGTTTTTTCCTGAAGTGGCCTTACCGGAAATGGATGGTCATCGAAAGCGTCAGAAGCTAGAGGTCATAGCTGATTTGCTATCTCGAGACTATAGGAAGGCAGTGGAAAGTTCTGCTTCAGACGAAGGCAAGGGCTTAGTAAATCTTGGAAGCAGGAAATCGGAGATGGAATGTATCTCACAGTTGAATCCGTGTTTGGACCTTTCCATTTCCCTACGCTGTCGATCTCCCTCTGCTCGAGCAGCTCCACAAGTTACGGGAGAGTATCCAACGTTCGGAGTGGTTTCCGTGCGTGGAAGGCGAAGAGACATGGAAGATGCGGTTGATGTTTGTCCATCGTTTTGCCGCCCTGGCCCCGAATCTAACCCTCACCTGCATTATTTTGCCGTTTATGACGGCCACGGTTGCTCTCATGTGGCGATGAAGTGCAAGGAACGACTGCATAAGCTGGTGAAGGAAGAGTTGGAGAGGATGGCTGAATCAGCGTTATTGAATGATTGGAAGAGCGCTATGGAGAGAAGCTTTCGGCGCATGGACAAGGAGGTCAGTTGTTATAGTGAAAACGTTTCAGGTTCGAACTGCAGATGCCTGTTTCAGCCACCTGAGAGCGATACAGTTGGATCTACAGCCGTGGCTGCCATTTTAACCCCTGAGAAGATCATCGTCTCCAACTGCGGTGATTCGAGGGCTGTGCTGTGTCGAAGCGGCAAACCAGTCCCTCTCTCCTCTGATCACAAGCCGGATCGTCCAGACGAACAGAAGCGGATAGAAGCGGCCGGCGGGCAAGTCATCTACTGGGGAGGCCCAAGGGTTCTCGGAGTTCTAGCCACATCAAGAGCCATTGCCATTGATATTCTACAAACTTCACCAGGTGATAACTATCTGAAGCCCTACGTAAGCTGCGATCCGGAAGTGACAATCACTGAGCGGACGGCAGAGGATGATTGTCTCATAATAGGCAGCGACGGACTATGGGACGTTGTGTCCAACGACACAGCGTGCGAGGTGGCATGGATGTGTCTCCGAGGCAAGGCTGAAAGGGCGCCGCCTCCCTGTCATCCGGCGAGCAGCGAAAACAACAGCCCTGAAAATCCCAATAAGGTGTGCATCGAGGCCGCAACGCTGCTGACCAAGTTGGCCTTGGCCCGTAGAAGTTGCGACAACGTGAGCTTGGTAGTAGTGGACCTGAGGAGGGAGACGTTGAGTGCTGTATATTAA | 1305 | 52.41 | MTEIFRSVMSEGDMKRAASPRRAMEKEWIEFFPEVALPEMDGHRKRQKLEVIADLLSRDYRKAVESSASDEGKGLVNLGSRKSEMECISQLNPCLDLSISLRCRSPSARAAPQVTGEYPTFGVVSVRGRRRDMEDAVDVCPSFCRPGPESNPHLHYFAVYDGHGCSHVAMKCKERLHKLVKEELERMAESALLNDWKSAMERSFRRMDKEVSCYSENVSGSNCRCLFQPPESDTVGSTAVAAILTPEKIIVSNCGDSRAVLCRSGKPVPLSSDHKPDRPDEQKRIEAAGGQVIYWGGPRVLGVLATSRAIAIDILQTSPGDNYLKPYVSCDPEVTITERTAEDDCLIIGSDGLWDVVSNDTACEVAWMCLRGKAERAPPPCHPASSENNSPENPNKVCIEAATLLTKLALARRSCDNVSLVVVDLRRETLSAVY | 434 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 38515727 | 38517349 | - | BLOR12407 | Blo03g01226 | 58690 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo03g01226 | 434 | CDD | PP2Cc | 121 | 425 | IPR001932 | - | |
Blo03g01226 | 434 | SUPERFAMILY | PP2C-like | 119 | 426 | IPR036457 | - | |
Blo03g01226 | 434 | PANTHER | ALPHABET, ISOFORM E-RELATED | 106 | 429 | - | - | |
Blo03g01226 | 434 | PANTHER | PROTEIN PHOSPHATASE 2C 37 | 106 | 429 | - | - | |
Blo03g01226 | 434 | ProSiteProfiles | PPM-type phosphatase domain profile. | 120 | 425 | IPR001932 | - | |
Blo03g01226 | 434 | Gene3D | - | 111 | 430 | IPR036457 | - | |
Blo03g01226 | 434 | Pfam | Protein phosphatase 2C | 121 | 393 | IPR001932 | - | |
Blo03g01226 | 434 | SMART | PP2C_4 | 108 | 423 | IPR001932 | - | |
Blo03g01226 | 434 | ProSitePatterns | PPM-type phosphatase domain signature. | 156 | 164 | IPR000222 | GO:0043169 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo03g01226 | Blo13g01063 | CCT | |
Blo03g01226 | Blo14g00107 | CCT | |
Blo03g01226 | Blo13g01063 | ECH | |
Blo03g01226 | Blo14g00107 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g01226 | Blo-Chr3:38515727 | Blo04g00122 | Blo-Chr4:1023845 | 1.39E-125 | dispersed | |
Blo13g00881 | Blo-Chr13:31347934 | Blo03g01226 | Blo-Chr3:38515727 | 1.05E-122 | wgd | |
Blo13g01063 | Blo-Chr13:32859847 | Blo03g01226 | Blo-Chr3:38515727 | 2.70E-148 | wgd | |
Blo14g00107 | Blo-Chr14:745207 | Blo03g01226 | Blo-Chr3:38515727 | 1.69E-132 | wgd | |
Blo03g01151 | Blo-Chr3:37916954 | Blo03g01226 | Blo-Chr3:38515727 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo03g01226 | K14497 | - | jre:109017805 | 475.707 |