Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01226 ATGACGGAGATTTTCCGCTCGGTGATGAGTGAGGGCGACATGAAACGTGCTGCCAGCCCGAGGAGGGCGATGGAGAAAGAGTGGATTGAGTTTTTTCCTGAAGTGGCCTTACCGGAAATGGATGGTCATCGAAAGCGTCAGAAGCTAGAGGTCATAGCTGATTTGCTATCTCGAGACTATAGGAAGGCAGTGGAAAGTTCTGCTTCAGACGAAGGCAAGGGCTTAGTAAATCTTGGAAGCAGGAAATCGGAGATGGAATGTATCTCACAGTTGAATCCGTGTTTGGACCTTTCCATTTCCCTACGCTGTCGATCTCCCTCTGCTCGAGCAGCTCCACAAGTTACGGGAGAGTATCCAACGTTCGGAGTGGTTTCCGTGCGTGGAAGGCGAAGAGACATGGAAGATGCGGTTGATGTTTGTCCATCGTTTTGCCGCCCTGGCCCCGAATCTAACCCTCACCTGCATTATTTTGCCGTTTATGACGGCCACGGTTGCTCTCATGTGGCGATGAAGTGCAAGGAACGACTGCATAAGCTGGTGAAGGAAGAGTTGGAGAGGATGGCTGAATCAGCGTTATTGAATGATTGGAAGAGCGCTATGGAGAGAAGCTTTCGGCGCATGGACAAGGAGGTCAGTTGTTATAGTGAAAACGTTTCAGGTTCGAACTGCAGATGCCTGTTTCAGCCACCTGAGAGCGATACAGTTGGATCTACAGCCGTGGCTGCCATTTTAACCCCTGAGAAGATCATCGTCTCCAACTGCGGTGATTCGAGGGCTGTGCTGTGTCGAAGCGGCAAACCAGTCCCTCTCTCCTCTGATCACAAGCCGGATCGTCCAGACGAACAGAAGCGGATAGAAGCGGCCGGCGGGCAAGTCATCTACTGGGGAGGCCCAAGGGTTCTCGGAGTTCTAGCCACATCAAGAGCCATTGCCATTGATATTCTACAAACTTCACCAGGTGATAACTATCTGAAGCCCTACGTAAGCTGCGATCCGGAAGTGACAATCACTGAGCGGACGGCAGAGGATGATTGTCTCATAATAGGCAGCGACGGACTATGGGACGTTGTGTCCAACGACACAGCGTGCGAGGTGGCATGGATGTGTCTCCGAGGCAAGGCTGAAAGGGCGCCGCCTCCCTGTCATCCGGCGAGCAGCGAAAACAACAGCCCTGAAAATCCCAATAAGGTGTGCATCGAGGCCGCAACGCTGCTGACCAAGTTGGCCTTGGCCCGTAGAAGTTGCGACAACGTGAGCTTGGTAGTAGTGGACCTGAGGAGGGAGACGTTGAGTGCTGTATATTAA 1305 52.41 MTEIFRSVMSEGDMKRAASPRRAMEKEWIEFFPEVALPEMDGHRKRQKLEVIADLLSRDYRKAVESSASDEGKGLVNLGSRKSEMECISQLNPCLDLSISLRCRSPSARAAPQVTGEYPTFGVVSVRGRRRDMEDAVDVCPSFCRPGPESNPHLHYFAVYDGHGCSHVAMKCKERLHKLVKEELERMAESALLNDWKSAMERSFRRMDKEVSCYSENVSGSNCRCLFQPPESDTVGSTAVAAILTPEKIIVSNCGDSRAVLCRSGKPVPLSSDHKPDRPDEQKRIEAAGGQVIYWGGPRVLGVLATSRAIAIDILQTSPGDNYLKPYVSCDPEVTITERTAEDDCLIIGSDGLWDVVSNDTACEVAWMCLRGKAERAPPPCHPASSENNSPENPNKVCIEAATLLTKLALARRSCDNVSLVVVDLRRETLSAVY 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 38515727 38517349 - BLOR12407 Blo03g01226 58690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01226 434 CDD PP2Cc 121 425 IPR001932 -
Blo03g01226 434 SUPERFAMILY PP2C-like 119 426 IPR036457 -
Blo03g01226 434 PANTHER ALPHABET, ISOFORM E-RELATED 106 429 - -
Blo03g01226 434 PANTHER PROTEIN PHOSPHATASE 2C 37 106 429 - -
Blo03g01226 434 ProSiteProfiles PPM-type phosphatase domain profile. 120 425 IPR001932 -
Blo03g01226 434 Gene3D - 111 430 IPR036457 -
Blo03g01226 434 Pfam Protein phosphatase 2C 121 393 IPR001932 -
Blo03g01226 434 SMART PP2C_4 108 423 IPR001932 -
Blo03g01226 434 ProSitePatterns PPM-type phosphatase domain signature. 156 164 IPR000222 GO:0043169
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01226 Blo13g01063 CCT
Blo03g01226 Blo14g00107 CCT
Blo03g01226 Blo13g01063 ECH
Blo03g01226 Blo14g00107 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01226 Blo-Chr3:38515727 Blo04g00122 Blo-Chr4:1023845 1.39E-125 dispersed
Blo13g00881 Blo-Chr13:31347934 Blo03g01226 Blo-Chr3:38515727 1.05E-122 wgd
Blo13g01063 Blo-Chr13:32859847 Blo03g01226 Blo-Chr3:38515727 2.70E-148 wgd
Blo14g00107 Blo-Chr14:745207 Blo03g01226 Blo-Chr3:38515727 1.69E-132 wgd
Blo03g01151 Blo-Chr3:37916954 Blo03g01226 Blo-Chr3:38515727 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01226 K14497 - jre:109017805 475.707