Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo03g01237 | ATGGGTCTCTCCGATTCCGATACAATTGTCTCTGCAGAAAAAGATATAAGCGCCATAGAATGCAGACTAAGACCCACGTCGTCGTTTCACCATGAACGCCTGAATTCAAGCTCAGAAGAAAGAGAAGAAGAAAAAGAGGAAGAAAAAGAAAAAACGTCTTCGTCTGAACGTTTTCTATCTTCCCTGCAAGTTAAACTGCCCGTTCCAGTAGTAGAGTCTACAGTTAAAGAAGACGACGATGGGTTTAAAACTCCAACTTCTCTGGATCACAAAATTCCGGCGATCTTCCATTGCCCTCCGCCGCCGACAAAATCCAAATCAGGTAGATCATCCAAACGGAAAGATCACCGGCGTGACAGAGTTTTTGTCGATCTGTCAAAAGAGATAGAATCAATGTTTCCTACAGTTTTTGAAGGAGTAGATTTTGGTTTATCTGCGACCGATTGCATGCCGCGAGATCTGATTGGGGAGTCAACTATGGCGGAGGAGAAAGGTATTATCGTTAAGAGCCTGATCGAGCTATTGAACGCGATTGCTTGCATCTCGGATTACAGGTCTACTGTGAAGAAGCAGTATTGCAATTTAGCGAGGCGATTGAAGCTCTTGGTCCCAATGTTTGAAGAGATAAGGGACAGCGGAGAGGCGCTCCCCGAGCAGACTCTGAAAGCTCTAGTTTCATTGCAAGCAGGTTTGAAATCAGCTATAGAGTTGCTCAAATTTGGGAGCGTGGGAAGTAAGATTTATATGGAATATCGACTAGATGAAATTGCAGCGATTGCCATGCTTTTGTTGGTCCTTGAAACGGAGCAAATTATGCATAATTTCCACAAGATAACAGCTCAATTGGAACAAGCTTTGATTGGAATTTCTTACGATAAACTTGACATATCTGATGAAGTTAAGGAACAGGTTGAACTTGTTCTTGCCCAGTTTAGAAGAGCCAAAGGCAGGATTGATACATCTGATGCTCAGCTGCATGACGAGCTTGTATCAGTACATAGCATGAATGATTCTGCTACAGACCCAGCTGTCCTAAGGGGATTGGCTGAAAAATTGAATCTAACTGGAATACCTGAACTTAAACAAGAGTCACTAGCTTTATCTGAGATGGTTACTACTAGTGGTGATGACCCAGGGGAGACCATTGAGAAGATGTTAATGCTACTAAATAAAATAAGGGATTTTGTACTCACAGAAAATCCTGACATTGATAATCCAGCTCGAGATAAGCGCATCTCCTCTAGTGATGGTGGACAAGTATCTGCTGACAGTGATTGCAAATCTCCAGTTATTCCAGATGATTTTCGTTGCCCCATATCTCTAGAGTTGATGAAGGATCCTGTCATTGTTTCTACAGGGCAGACTTATGAACGTTCCTGCATTGAAAAGTGGCTGGATGCAGGGCATGGAACATGTCCAAAGACGCAACAGACGCTTTTGACCTCTATTCTCACGCCAAATTATGTCTTGCATACTCTCATAGCCCAGTGGTGTGAGGCAAATGGACTTGAACCACCGGAAAGACCCAGTAAAACATCTGCTCACTCACGTGCTGAACACAAAAACATTGAAATTCTCATTTGCAAACTAATGTCTACCAACCCTGAAGACCAGCTTTCTGCTGCTGGTGAAATTCGCCTTCTTGCCAAGCGTAATACAGATAATCGTGTTGCCATTGCTGAGGCCGGTGCAATCCCTCTCCTTGTGAGCCTCCTTTCAACGACAGATTCACGCACTCAAGAGCATGCAGTAACAGCACTTCTTAACCTTTCTATCTGTGAGCATAACAAGGGAGCCATTGTGTCATCAGGGGCTATTCCTGGAATAGTTCACGTGCTTAAGAGAGGAAGCATGGAAGCTCGAGAAAATGCAGCGGCCACCCTTTTCAGCCTCTCTGTCTTGGATGGAAATAAAGTAACAATAGGTTCATCCGGAGCCATCCCACCACTTGTTATGCTGCTAAGTCAAGGAACTCAAAGGGGAAAGAAAGATGCTGCCACTGCTCTCTTCAACTTGTGCATGTACTTGGGGAACAAAGGAAAGGCAGTCAGGGCTGGTGTCATTCCCATATTGATGCGACTATTGACAGAAAGTGGAGGAGGAATGGTAGATGAGGCCTTAGCCATCTTAGCAATACTGGCCAACCATCCTGAAGGCAAAAGTGCCATTGGAGCAGCAGATGCTGTTCCTGTTTTAGTAGAGGTTATCAGGACTGGATCTCCCAGGAACAGAGAAAATGCAGCTGCAGTTTTGGTGCACCTGTGTTCTTGGGACCAACATCATCTGGTGGAGGCTAAGGAACTTGGGGCGGTTGGACCTTTGATCGATTTAGCCCACAATGGCACGCACAGAGGCAAGAGAAAAGCTGCCCAATTACTAGAGCGGATGTGCAGGTTTATTGAACTGCAGAACCTGTCACAGGCCGAGTCTCAATCTGAGATCCAGACGCCACAGCCACTGACCACAGTTGATCATAACTGA | 2481 | 44.98 | MGLSDSDTIVSAEKDISAIECRLRPTSSFHHERLNSSSEEREEEKEEEKEKTSSSERFLSSLQVKLPVPVVESTVKEDDDGFKTPTSLDHKIPAIFHCPPPPTKSKSGRSSKRKDHRRDRVFVDLSKEIESMFPTVFEGVDFGLSATDCMPRDLIGESTMAEEKGIIVKSLIELLNAIACISDYRSTVKKQYCNLARRLKLLVPMFEEIRDSGEALPEQTLKALVSLQAGLKSAIELLKFGSVGSKIYMEYRLDEIAAIAMLLLVLETEQIMHNFHKITAQLEQALIGISYDKLDISDEVKEQVELVLAQFRRAKGRIDTSDAQLHDELVSVHSMNDSATDPAVLRGLAEKLNLTGIPELKQESLALSEMVTTSGDDPGETIEKMLMLLNKIRDFVLTENPDIDNPARDKRISSSDGGQVSADSDCKSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLDAGHGTCPKTQQTLLTSILTPNYVLHTLIAQWCEANGLEPPERPSKTSAHSRAEHKNIEILICKLMSTNPEDQLSAAGEIRLLAKRNTDNRVAIAEAGAIPLLVSLLSTTDSRTQEHAVTALLNLSICEHNKGAIVSSGAIPGIVHVLKRGSMEARENAAATLFSLSVLDGNKVTIGSSGAIPPLVMLLSQGTQRGKKDAATALFNLCMYLGNKGKAVRAGVIPILMRLLTESGGGMVDEALAILAILANHPEGKSAIGAADAVPVLVEVIRTGSPRNRENAAAVLVHLCSWDQHHLVEAKELGAVGPLIDLAHNGTHRGKRKAAQLLERMCRFIELQNLSQAESQSEIQTPQPLTTVDHN | 826 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 38604917 | 38611384 | + | BLOR12418 | Blo03g01237 | 58701 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo03g01237 | 826 | MobiDBLite | consensus disorder prediction | 403 | 427 | - | - | |
Blo03g01237 | 826 | SUPERFAMILY | ARM repeat | 520 | 803 | IPR016024 | - | |
Blo03g01237 | 826 | MobiDBLite | consensus disorder prediction | 23 | 58 | - | - | |
Blo03g01237 | 826 | Pfam | U-box domain | 431 | 501 | IPR003613 | GO:0004842|GO:0016567 | |
Blo03g01237 | 826 | CDD | RING-Ubox_PUB | 435 | 477 | IPR045210 | - | |
Blo03g01237 | 826 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 428 | 504 | IPR013083 | - | |
Blo03g01237 | 826 | MobiDBLite | consensus disorder prediction | 76 | 117 | - | - | |
Blo03g01237 | 826 | PANTHER | U BOX DOMAIN-CONTAINING | 165 | 809 | - | - | |
Blo03g01237 | 826 | Pfam | Armadillo/beta-catenin-like repeat | 717 | 756 | IPR000225 | GO:0005515 | |
Blo03g01237 | 826 | Pfam | Armadillo/beta-catenin-like repeat | 636 | 673 | IPR000225 | GO:0005515 | |
Blo03g01237 | 826 | Pfam | Armadillo/beta-catenin-like repeat | 552 | 591 | IPR000225 | GO:0005515 | |
Blo03g01237 | 826 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 563 | 605 | IPR000225 | GO:0005515 | |
Blo03g01237 | 826 | Coils | Coil | 31 | 51 | - | - | |
Blo03g01237 | 826 | SUPERFAMILY | RING/U-box | 427 | 507 | - | - | |
Blo03g01237 | 826 | SMART | arm_5 | 716 | 756 | IPR000225 | GO:0005515 | |
Blo03g01237 | 826 | SMART | arm_5 | 634 | 674 | IPR000225 | GO:0005515 | |
Blo03g01237 | 826 | SMART | arm_5 | 758 | 798 | IPR000225 | GO:0005515 | |
Blo03g01237 | 826 | SMART | arm_5 | 552 | 592 | IPR000225 | GO:0005515 | |
Blo03g01237 | 826 | SMART | arm_5 | 675 | 715 | IPR000225 | GO:0005515 | |
Blo03g01237 | 826 | SMART | arm_5 | 593 | 633 | IPR000225 | GO:0005515 | |
Blo03g01237 | 826 | Gene3D | - | 510 | 701 | IPR011989 | - | |
Blo03g01237 | 826 | Gene3D | - | 702 | 812 | IPR011989 | - | |
Blo03g01237 | 826 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 165 | 809 | - | - | |
Blo03g01237 | 826 | SMART | Ubox_2 | 434 | 497 | IPR003613 | GO:0004842|GO:0016567 | |
Blo03g01237 | 826 | MobiDBLite | consensus disorder prediction | 23 | 55 | - | - | |
Blo03g01237 | 826 | ProSiteProfiles | U-box domain profile. | 430 | 504 | IPR003613 | GO:0004842|GO:0016567 | |
Blo03g01237 | 826 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 686 | 728 | IPR000225 | GO:0005515 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo03g01237 | Blo14g00121 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g01237 | Blo-Chr3:38604917 | Blo04g00330 | Blo-Chr4:2614351 | 0 | dispersed | |
Blo04g01074 | Blo-Chr4:15620449 | Blo03g01237 | Blo-Chr3:38604917 | 6.72E-24 | dispersed | |
Blo14g00121 | Blo-Chr14:881191 | Blo03g01237 | Blo-Chr3:38604917 | 0 | wgd | |
Blo03g01130 | Blo-Chr3:37761378 | Blo03g01237 | Blo-Chr3:38604917 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo03g01237 | - | - | mnt:21407917 | 937.562 |