Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01237 ATGGGTCTCTCCGATTCCGATACAATTGTCTCTGCAGAAAAAGATATAAGCGCCATAGAATGCAGACTAAGACCCACGTCGTCGTTTCACCATGAACGCCTGAATTCAAGCTCAGAAGAAAGAGAAGAAGAAAAAGAGGAAGAAAAAGAAAAAACGTCTTCGTCTGAACGTTTTCTATCTTCCCTGCAAGTTAAACTGCCCGTTCCAGTAGTAGAGTCTACAGTTAAAGAAGACGACGATGGGTTTAAAACTCCAACTTCTCTGGATCACAAAATTCCGGCGATCTTCCATTGCCCTCCGCCGCCGACAAAATCCAAATCAGGTAGATCATCCAAACGGAAAGATCACCGGCGTGACAGAGTTTTTGTCGATCTGTCAAAAGAGATAGAATCAATGTTTCCTACAGTTTTTGAAGGAGTAGATTTTGGTTTATCTGCGACCGATTGCATGCCGCGAGATCTGATTGGGGAGTCAACTATGGCGGAGGAGAAAGGTATTATCGTTAAGAGCCTGATCGAGCTATTGAACGCGATTGCTTGCATCTCGGATTACAGGTCTACTGTGAAGAAGCAGTATTGCAATTTAGCGAGGCGATTGAAGCTCTTGGTCCCAATGTTTGAAGAGATAAGGGACAGCGGAGAGGCGCTCCCCGAGCAGACTCTGAAAGCTCTAGTTTCATTGCAAGCAGGTTTGAAATCAGCTATAGAGTTGCTCAAATTTGGGAGCGTGGGAAGTAAGATTTATATGGAATATCGACTAGATGAAATTGCAGCGATTGCCATGCTTTTGTTGGTCCTTGAAACGGAGCAAATTATGCATAATTTCCACAAGATAACAGCTCAATTGGAACAAGCTTTGATTGGAATTTCTTACGATAAACTTGACATATCTGATGAAGTTAAGGAACAGGTTGAACTTGTTCTTGCCCAGTTTAGAAGAGCCAAAGGCAGGATTGATACATCTGATGCTCAGCTGCATGACGAGCTTGTATCAGTACATAGCATGAATGATTCTGCTACAGACCCAGCTGTCCTAAGGGGATTGGCTGAAAAATTGAATCTAACTGGAATACCTGAACTTAAACAAGAGTCACTAGCTTTATCTGAGATGGTTACTACTAGTGGTGATGACCCAGGGGAGACCATTGAGAAGATGTTAATGCTACTAAATAAAATAAGGGATTTTGTACTCACAGAAAATCCTGACATTGATAATCCAGCTCGAGATAAGCGCATCTCCTCTAGTGATGGTGGACAAGTATCTGCTGACAGTGATTGCAAATCTCCAGTTATTCCAGATGATTTTCGTTGCCCCATATCTCTAGAGTTGATGAAGGATCCTGTCATTGTTTCTACAGGGCAGACTTATGAACGTTCCTGCATTGAAAAGTGGCTGGATGCAGGGCATGGAACATGTCCAAAGACGCAACAGACGCTTTTGACCTCTATTCTCACGCCAAATTATGTCTTGCATACTCTCATAGCCCAGTGGTGTGAGGCAAATGGACTTGAACCACCGGAAAGACCCAGTAAAACATCTGCTCACTCACGTGCTGAACACAAAAACATTGAAATTCTCATTTGCAAACTAATGTCTACCAACCCTGAAGACCAGCTTTCTGCTGCTGGTGAAATTCGCCTTCTTGCCAAGCGTAATACAGATAATCGTGTTGCCATTGCTGAGGCCGGTGCAATCCCTCTCCTTGTGAGCCTCCTTTCAACGACAGATTCACGCACTCAAGAGCATGCAGTAACAGCACTTCTTAACCTTTCTATCTGTGAGCATAACAAGGGAGCCATTGTGTCATCAGGGGCTATTCCTGGAATAGTTCACGTGCTTAAGAGAGGAAGCATGGAAGCTCGAGAAAATGCAGCGGCCACCCTTTTCAGCCTCTCTGTCTTGGATGGAAATAAAGTAACAATAGGTTCATCCGGAGCCATCCCACCACTTGTTATGCTGCTAAGTCAAGGAACTCAAAGGGGAAAGAAAGATGCTGCCACTGCTCTCTTCAACTTGTGCATGTACTTGGGGAACAAAGGAAAGGCAGTCAGGGCTGGTGTCATTCCCATATTGATGCGACTATTGACAGAAAGTGGAGGAGGAATGGTAGATGAGGCCTTAGCCATCTTAGCAATACTGGCCAACCATCCTGAAGGCAAAAGTGCCATTGGAGCAGCAGATGCTGTTCCTGTTTTAGTAGAGGTTATCAGGACTGGATCTCCCAGGAACAGAGAAAATGCAGCTGCAGTTTTGGTGCACCTGTGTTCTTGGGACCAACATCATCTGGTGGAGGCTAAGGAACTTGGGGCGGTTGGACCTTTGATCGATTTAGCCCACAATGGCACGCACAGAGGCAAGAGAAAAGCTGCCCAATTACTAGAGCGGATGTGCAGGTTTATTGAACTGCAGAACCTGTCACAGGCCGAGTCTCAATCTGAGATCCAGACGCCACAGCCACTGACCACAGTTGATCATAACTGA 2481 44.98 MGLSDSDTIVSAEKDISAIECRLRPTSSFHHERLNSSSEEREEEKEEEKEKTSSSERFLSSLQVKLPVPVVESTVKEDDDGFKTPTSLDHKIPAIFHCPPPPTKSKSGRSSKRKDHRRDRVFVDLSKEIESMFPTVFEGVDFGLSATDCMPRDLIGESTMAEEKGIIVKSLIELLNAIACISDYRSTVKKQYCNLARRLKLLVPMFEEIRDSGEALPEQTLKALVSLQAGLKSAIELLKFGSVGSKIYMEYRLDEIAAIAMLLLVLETEQIMHNFHKITAQLEQALIGISYDKLDISDEVKEQVELVLAQFRRAKGRIDTSDAQLHDELVSVHSMNDSATDPAVLRGLAEKLNLTGIPELKQESLALSEMVTTSGDDPGETIEKMLMLLNKIRDFVLTENPDIDNPARDKRISSSDGGQVSADSDCKSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLDAGHGTCPKTQQTLLTSILTPNYVLHTLIAQWCEANGLEPPERPSKTSAHSRAEHKNIEILICKLMSTNPEDQLSAAGEIRLLAKRNTDNRVAIAEAGAIPLLVSLLSTTDSRTQEHAVTALLNLSICEHNKGAIVSSGAIPGIVHVLKRGSMEARENAAATLFSLSVLDGNKVTIGSSGAIPPLVMLLSQGTQRGKKDAATALFNLCMYLGNKGKAVRAGVIPILMRLLTESGGGMVDEALAILAILANHPEGKSAIGAADAVPVLVEVIRTGSPRNRENAAAVLVHLCSWDQHHLVEAKELGAVGPLIDLAHNGTHRGKRKAAQLLERMCRFIELQNLSQAESQSEIQTPQPLTTVDHN 826
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 38604917 38611384 + BLOR12418 Blo03g01237 58701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01237 826 MobiDBLite consensus disorder prediction 403 427 - -
Blo03g01237 826 SUPERFAMILY ARM repeat 520 803 IPR016024 -
Blo03g01237 826 MobiDBLite consensus disorder prediction 23 58 - -
Blo03g01237 826 Pfam U-box domain 431 501 IPR003613 GO:0004842|GO:0016567
Blo03g01237 826 CDD RING-Ubox_PUB 435 477 IPR045210 -
Blo03g01237 826 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 428 504 IPR013083 -
Blo03g01237 826 MobiDBLite consensus disorder prediction 76 117 - -
Blo03g01237 826 PANTHER U BOX DOMAIN-CONTAINING 165 809 - -
Blo03g01237 826 Pfam Armadillo/beta-catenin-like repeat 717 756 IPR000225 GO:0005515
Blo03g01237 826 Pfam Armadillo/beta-catenin-like repeat 636 673 IPR000225 GO:0005515
Blo03g01237 826 Pfam Armadillo/beta-catenin-like repeat 552 591 IPR000225 GO:0005515
Blo03g01237 826 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 563 605 IPR000225 GO:0005515
Blo03g01237 826 Coils Coil 31 51 - -
Blo03g01237 826 SUPERFAMILY RING/U-box 427 507 - -
Blo03g01237 826 SMART arm_5 716 756 IPR000225 GO:0005515
Blo03g01237 826 SMART arm_5 634 674 IPR000225 GO:0005515
Blo03g01237 826 SMART arm_5 758 798 IPR000225 GO:0005515
Blo03g01237 826 SMART arm_5 552 592 IPR000225 GO:0005515
Blo03g01237 826 SMART arm_5 675 715 IPR000225 GO:0005515
Blo03g01237 826 SMART arm_5 593 633 IPR000225 GO:0005515
Blo03g01237 826 Gene3D - 510 701 IPR011989 -
Blo03g01237 826 Gene3D - 702 812 IPR011989 -
Blo03g01237 826 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 165 809 - -
Blo03g01237 826 SMART Ubox_2 434 497 IPR003613 GO:0004842|GO:0016567
Blo03g01237 826 MobiDBLite consensus disorder prediction 23 55 - -
Blo03g01237 826 ProSiteProfiles U-box domain profile. 430 504 IPR003613 GO:0004842|GO:0016567
Blo03g01237 826 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 686 728 IPR000225 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01237 Blo14g00121 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01237 Blo-Chr3:38604917 Blo04g00330 Blo-Chr4:2614351 0 dispersed
Blo04g01074 Blo-Chr4:15620449 Blo03g01237 Blo-Chr3:38604917 6.72E-24 dispersed
Blo14g00121 Blo-Chr14:881191 Blo03g01237 Blo-Chr3:38604917 0 wgd
Blo03g01130 Blo-Chr3:37761378 Blo03g01237 Blo-Chr3:38604917 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01237 - - mnt:21407917 937.562