Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01240 ATGGCGAAAATCCTGATTTCTTCGCCACAATTTTGCGGGCCTCAGCTTCCCTCTTTCTCTAGACGTGGCTTTCACACCTTCCCTCACCGTGTCGCCACCAGAGTCAAGTTCAGCCTCCATGAGATACCTCCGATTCATTCGCTAGACTCAACCTTTGATTTTAACTCAGTTTTCACCAGGGCAGAAAGCCTGCTTTATACTCTCGCTGATGCAGCTGTCGCGATTGACCCTGCAGCAACAGGAGCCGCAGCTTCCAGCCCTGCTGATGCCGCTGTACAGAAGAATGGTGGATGGTTCGGATTTATCTCGGAGGGCATGGAAATCGTTCTAAAAGTGCTGAAGGATGGGCTTAGTGCAGTACACATACCATATGCATATGGATTTGCAATCATATTGCTGACAGTTATTGTTAAAGTTGCAACATTGCCTTTAACTAAGAAACAGGTGGAATCAACATTGGCAATGCAAAACCTCCAGCCAAAGATTAAAGCTATTCAACAAAGATATGCTGGAAATCAGGAAAGGATACAACTAGAGACATCTCGACTTTACAAGCAAGCTGGCGTCAATCCATTAGCGGGTTGTTTCCCCACTTTGGCCACCATACCAGTTTGGATAGGACTATATCAAGCTCTTTCGAACGTGGCAAATGAGGGTTTGTTCACTGAAGGTTTCTTTTGGATCCCTTCGCTTGGTGGCCCGACTACAATTGCCGCCCGACAAAGTGGTTCTGGAATCTCCTGGCTGATACCTTTTGTGGATGGTCATCCTCCATTAGGCTGGCATGACACTTTGGCATACCTTGTTTTACCTGTCCTTCTTGTAGTCTCACAGTTTGTGTCAATGGAAATTATGAAGCCTCCACAGTCCGATGATCCGTCCCAAAAGAATTCACTTCTAGCTTTGAAGTTTCTTCCTCTCATGATCGGATACTTCTCTTTGTCTGTTCCGTCGGGATTATCGATTTACTGGTTCACAAACAACGTTTTAAGCACAGCACAACAAGTATGGTTGCGAAAATTGGGAGGGGCAAAGCCCGCTGTGAGCGAGGATGGTGGTGCAATAATAACGGCAGGTCGAGCAAAACGGACGTCTGAATCAGGCCGGTCGGGCAACAGATTTAAGCAGTTAAGAGAAGAAGAGAGGAAGAACAAGCCAAGCAAATCAGTGGAGGCCGGGGAAATTCAGATTCTTGCTTCCGAATCCGATGCCGAAGAAGGTTCAGCCGAAGAGATTAAGGAGAAGGGGGAGGAAGTACTAGAAGAGGCACTTGCTTCCAGTGTTGGCAAAGAGGTTCCAGATTACACCCGGCCGAAAAGAAGTAAGCGATCGAAGCGGAAGCGAGGCGCTTGA 1353 47.3 MAKILISSPQFCGPQLPSFSRRGFHTFPHRVATRVKFSLHEIPPIHSLDSTFDFNSVFTRAESLLYTLADAAVAIDPAATGAAASSPADAAVQKNGGWFGFISEGMEIVLKVLKDGLSAVHIPYAYGFAIILLTVIVKVATLPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTTIAARQSGSGISWLIPFVDGHPPLGWHDTLAYLVLPVLLVVSQFVSMEIMKPPQSDDPSQKNSLLALKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPAVSEDGGAIITAGRAKRTSESGRSGNRFKQLREEERKNKPSKSVEAGEIQILASESDAEEGSAEEIKEKGEEVLEEALASSVGKEVPDYTRPKRSKRSKRKRGA 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 38624201 38627841 + BLOR12421 Blo03g01240 58704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01240 450 Pfam 60Kd inner membrane protein 126 340 IPR001708 GO:0016021|GO:0032977
Blo03g01240 450 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 444 - -
Blo03g01240 450 MobiDBLite consensus disorder prediction 406 421 - -
Blo03g01240 450 PANTHER OXA1 1 444 IPR001708 GO:0016021|GO:0032977
Blo03g01240 450 MobiDBLite consensus disorder prediction 366 389 - -
Blo03g01240 450 MobiDBLite consensus disorder prediction 358 450 - -
Blo03g01240 450 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 126 339 IPR028055 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01240 Blo-Chr3:38624201 Blo16g01179 Blo-Chr16:40336976 3.77E-151 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01240 K03217 - vvi:100260431 640.188