Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01259 ATGGGTTGCTTCCGCTGCAACGAAAAATCGAGAAAAAGATCAGGTAAACCCCAGAAAATCAATCGTAATAACCATAACAATTTGGGAAACAAGCCGAATGATCAAACTGCTTCAGACACAGTGAAAGCTAATTCCAAATCGAAAGTAAAGAAAGATTCAGATGTAAAGGAGATAATCAAGGATGATCAATTAACTTTAGATTTAAAGGGTTTGAATTTAAAGGATGGAGATTCTAATGATTTAATAGCCAATGGCATACGGGAAAAGACATTTACATTCGATGAACTTGCTGCAATAACTGGAAATTTCCGATCAGATTGCTTCTTGGGAGAAGGAGGGTTTGGTAGAGTCTACAAAGGGTACTTGGAAAAAATCAACCAGGATGTAGCTATCAAGCGACTTGATCGCAATGGAGTTCAAGGGATTAGAGAGTTTGTCGTGGAAGTCTTGACTTTAAGTATGGCCGACCACCCTAACCTCGTTAAACTAATTGGCTTTTGTGCCGAAGGGGATCAAAGGTTGTTGGTTTATGAATATATGTCACTTGGATCATTGGAAGATCACTTACACGACCTTCAACCTGATGGAAAAGTTCTTGATTGGAATACAAGAATGAAAATAGCGGCAGGGGCGGCCAGGGGATTGGAGTACTTGCACGATAAAATGAAGCCCCCCGTTATATATCGTGATTTGAAATGTTCAAATATTTTGATTGGCGAAGGGTATCATCCAAAGCTATCTGATTTTGGATTGGCTAAAGTCGGACCCAGTGGGGATAAAACCCATGTTTCGACCAGGGTCATGGGCACTTATGGGTACTGCGCACCGGACTATGCAATGACGGGTCAGCTTACTTTCAAATCGGATATTTACAGCTTTGGAGTCGTACTATTGGAGCTCATTACTGGTAGGAAAGCCATTGATCATTCAAAAGCTCACAAGGAGCAAAATTTGGTAGCTTGGGCACGACCCTTGTTCAGAGACCGGAAGAAATTCTCACAAATGGTTGATCCGAGGCTGCAAGGTCAATATCCTGTGAGAGGATTGTACCAAGCTCTTGCCATTGCAGCCATGTGTGTCCAAGAGCAGCCTAACATGAGACCTGTAATTTCCGATGTAGTTACTGCTTTAAACTACCTTGCTTCTCAGAAATACGAGTCCCCGACAAAACTCGCCCAAAGTTCTCGATGA 1191 42.07 MGCFRCNEKSRKRSGKPQKINRNNHNNLGNKPNDQTASDTVKANSKSKVKKDSDVKEIIKDDQLTLDLKGLNLKDGDSNDLIANGIREKTFTFDELAAITGNFRSDCFLGEGGFGRVYKGYLEKINQDVAIKRLDRNGVQGIREFVVEVLTLSMADHPNLVKLIGFCAEGDQRLLVYEYMSLGSLEDHLHDLQPDGKVLDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILIGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHSKAHKEQNLVAWARPLFRDRKKFSQMVDPRLQGQYPVRGLYQALAIAAMCVQEQPNMRPVISDVVTALNYLASQKYESPTKLAQSSR 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 38815338 38817711 - BLOR12440 Blo03g01259 58723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01259 396 SMART serkin_6 103 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g01259 396 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 1 393 - -
Blo03g01259 396 CDD STKc_IRAK 109 378 - -
Blo03g01259 396 Gene3D Phosphorylase Kinase; domain 1 88 179 - -
Blo03g01259 396 ProSiteProfiles Protein kinase domain profile. 103 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g01259 396 Gene3D Transferase(Phosphotransferase) domain 1 180 394 - -
Blo03g01259 396 SUPERFAMILY Protein kinase-like (PK-like) 89 384 IPR011009 -
Blo03g01259 396 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524
Blo03g01259 396 PANTHER OS07G0668900 PROTEIN 1 393 - -
Blo03g01259 396 Pfam Protein kinase domain 108 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g01259 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Blo03g01259 396 MobiDBLite consensus disorder prediction 20 43 - -
Blo03g01259 396 MobiDBLite consensus disorder prediction 1 49 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01259 Blo14g00145 CCT
Blo03g01259 Blo14g00145 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01259 Blo-Chr3:38815338 Blo12g00288 Blo-Chr12:17085939 2.08E-173 dispersed
Blo01g01149 Blo-Chr1:41796945 Blo03g01259 Blo-Chr3:38815338 3.61E-179 wgd
Blo12g00452 Blo-Chr12:22053100 Blo03g01259 Blo-Chr3:38815338 1.30E-07 wgd
Blo14g00145 Blo-Chr14:1084249 Blo03g01259 Blo-Chr3:38815338 0 wgd
Blo03g01259 Blo-Chr3:38815338 Blo04g00302 Blo-Chr4:2356696 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84205 PF00069 Pkinase 1.50E-45 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01259 - - bhj:120083806 625.55