Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01266 ATGGAGAGCAGTGAAGTAAATACATCTGCTTCATCAAACCCTGCATTTTCTTCGTCTCCGGTTTCAGCCTCTTCTCCTTTTCCTCAGGGAGTGTCTTTGCATGTAATTGTCAGTCCTTGCGCGGCGTGCAAGATTTTGCGGCGGAGATGCGCTGAGAAATGTGTGCTGGCGCCGTACTTTCCTCCCACTGAACCGGCGAAATTCACCATAGCTCATCGGGTTTTTGGTGCCAGTAATATCATCAAACCATTGACGCTGAAAAATGAAAATTTTCAGGAGCTACCGGAGAGTCAAAGAGCCGACGCAGTAAGCAGCATGGTGTACGAAGCAAGTGCGAGAATAAGAGATCCAGTTTACGGATGTGCAGGCGCCATTTGCCAGCTTCAAAAGCAAGTGAACGAGCTTCAAGCTGAACTAGCCAAAGCCCAGGCCGAGCTAGTCAACATGCAGTTTCAGCAGACCAACCTCGTCTCTCTAATTTGCAGAGAGTTTTCAGAGTCTTCTCAACCATGTCCGAATCATCACCACCGTCAATCTCTTGATGATTTCATTCAGAACGACCCTCATTCTTACCTCACGAGCAACTCTGGTTTCTTCGAAGACGGCTCCATGTGGGAGCCTCTTTGGACT 630 48.41 MESSEVNTSASSNPAFSSSPVSASSPFPQGVSLHVIVSPCAACKILRRRCAEKCVLAPYFPPTEPAKFTIAHRVFGASNIIKPLTLKNENFQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVNELQAELAKAQAELVNMQFQQTNLVSLICREFSESSQPCPNHHHRQSLDDFIQNDPHSYLTSNSGFFEDGSMWEPLWT 210
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 38972906 38973859 + BLOR12447 Blo03g01266 58730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01266 210 Coils Coil 125 152 - -
Blo03g01266 210 Pfam Lateral organ boundaries (LOB) domain 39 143 IPR004883 -
Blo03g01266 210 ProSiteProfiles LOB domain profile. 38 146 IPR004883 -
Blo03g01266 210 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 25 209 - -
Blo03g01266 210 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 25 209 - -
Blo03g01266 210 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01266 Blo-Chr3:38972906 Blo13g00804 Blo-Chr13:30805934 1.91E-49 dispersed
Blo03g01103 Blo-Chr3:37501099 Blo03g01266 Blo-Chr3:38972906 4.74E-64 wgd
Blo03g01266 Blo-Chr3:38972906 Blo04g00307 Blo-Chr4:2409645 4.00E-35 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12174 PF03195 LOB 1.80E-37 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01266 - - jre:108989605 256.144