Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01291 ATGGCGGGCGTTGAGGGTTCTCCTGGAAGCTCAATGCATGGAGTCACTGGAAGAGAACAGACCTTCGCCTTTTCTGTTGCTTCTCCTATCGTGCACAGCGACCCGACGGCGAAGTTCGATCTTCCCGTTGATTCTGAACACAAGGCTACTGTTTTCAAGCTCTTCTCCTTCGCTAATCCCCATATGAGAACGTTCCACCTCTCGTGGATTTCATTCTTCACCTGCTTCATTTCCACCTTCGCCGCCGCTCCTCTCGTCCCGATCATCAGAGACAACCTTAACCTTACGAAAGGAGACATCGGAAACGCCGGCGTCGCCTCGGTTTCAGGCAGTATTTTCTCGAGGCTTGTGATGGGGGCAGTCTGCGACCTCCTCGGTCCTCGCTACGGCTGTGCCTTTCTCATCATGCTCTCCGCTCCGACCGTCTTCTGCATGTCTTTTGTATCATCGGCGTCTGGCTACATAGCGGTGCGGTTCATGATCGGATTCTCTTTGGCTACTTTCGTCTCATGCCAGTACTGGATGAGCACCATGTTCAACAGCAAGATCATAGGGCTGGTCAATGGAACGGCAGCGGGATGGGGGAACATGGGAGGAGGAGCGACTCAGCTGTTGATGCCTCTTCTTTATGAGCTTATCAAAAAAATTGGTTCTACTCCTTTTACTGCCTGGAGAATCGCCTTCTTCATCCCCGGTTGGATGCATGTGATGATGGGTATCTTGGTTTTAACCCTAGGCCAAGATTTGCCTGATGGAAATCTAAGCACTCTTCAGAAAAAGGGTGATGTTGCTAAAGACAAGTTCTCCAAGGTTCTTTGGAATGCGGTTACGAATTACAGAACTTGGATCTTTGCCCTCCTCTATGGCTACTCCATGGGAGTCGAGCTTTCTACTGACAACGTCATTGCTGAGTATTTCTACGACAGGTTTGACCTAAATCTTCACACAGCCGGTATCATAGCAGCGACCTTCGGAATGGCTAACATAGTGGCTCGTCCTTCCGGTGGGTACGCTTCCGACTTTGCGGCTCGTTATTTTGGAATGAGAGGAAGGCTATGGACCCTCTGGATCCTCCAAACCCTAGGTGGAGTTTTCTGCATTTGGCTGGGACGGGCAAACTCCCTCCCCATCGCCGTCTTCGCCATGATCCTCTTCTCCATCGGAGCTCAGGCCGCTTGCGGCGCCACTTTTGGCATCATCCCCTTCATCTCTCGCCGCTCCCTGGGAATTATCTCGGGTTTAACCGGCGCTGGAGGGAACTTCGGTACAGAAGAATTCTATTACGGGTCGGAATGGACTGAGGATGAGAAGAAGAAGGGGCTTCACCAGCAGAGTATCAAATTTGCTGAAAACAGTCGATCTGAACGAGGAAGACGGGTTGCTTCTGCTCCTTCCCCGCCAAATACAACACCTGCTCATGTTTAA 1425 51.23 MAGVEGSPGSSMHGVTGREQTFAFSVASPIVHSDPTAKFDLPVDSEHKATVFKLFSFANPHMRTFHLSWISFFTCFISTFAAAPLVPIIRDNLNLTKGDIGNAGVASVSGSIFSRLVMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVSSASGYIAVRFMIGFSLATFVSCQYWMSTMFNSKIIGLVNGTAAGWGNMGGGATQLLMPLLYELIKKIGSTPFTAWRIAFFIPGWMHVMMGILVLTLGQDLPDGNLSTLQKKGDVAKDKFSKVLWNAVTNYRTWIFALLYGYSMGVELSTDNVIAEYFYDRFDLNLHTAGIIAATFGMANIVARPSGGYASDFAARYFGMRGRLWTLWILQTLGGVFCIWLGRANSLPIAVFAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGTEEFYYGSEWTEDEKKKGLHQQSIKFAENSRSERGRRVASAPSPPNTTPAHV 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 39251588 39253345 + BLOR12472 Blo03g01291 58755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01291 474 Pfam Major Facilitator Superfamily 69 422 IPR011701 GO:0022857|GO:0055085
Blo03g01291 474 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 423 IPR044772 GO:0015112
Blo03g01291 474 MobiDBLite consensus disorder prediction 449 474 - -
Blo03g01291 474 Gene3D MFS general substrate transporter like domains 57 254 IPR036259 -
Blo03g01291 474 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 423 471 - -
Blo03g01291 474 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 1 423 - -
Blo03g01291 474 Gene3D MFS general substrate transporter like domains 264 427 IPR036259 -
Blo03g01291 474 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 423 471 IPR044772 GO:0015112
Blo03g01291 474 CDD MFS_NRT2_like 65 422 IPR044772 GO:0015112
Blo03g01291 474 SUPERFAMILY MFS general substrate transporter 59 422 IPR036259 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01291 Blo14g00190 CCT
Blo03g01291 Blo14g00190 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00889 Blo-Chr6:32112531 Blo03g01291 Blo-Chr3:39251588 0 transposed
Blo10g00450 Blo-Chr10:8523939 Blo03g01291 Blo-Chr3:39251588 3.28E-156 transposed
Blo14g00190 Blo-Chr14:1574244 Blo03g01291 Blo-Chr3:39251588 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01291 K02575 - twl:119992031 836.254