Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01294 ATGGAGAAATCTGGGTATGGCCGCGATGGTGTTTTCAGGTCTCTCAGACCCCCACTTGTCCTTCCCCAAGATCCTGATCTCTCTATGGTTTCCTTCCTCTTCAGAAACTCTTCCTCTTACTCGCACAAACCTGCCCTCATCGACGCCGATTCTTCTGAGACCCTGTCGTTTTCCCAGCTCAAATCCATGGTGATTAAGGTCTCCCATGGCTTACTTCATCTGGGTATCAAGAAGAACGACGTTGTACTGATCTTGGCCCCCAATTCCATCCAATTTCCTATCTGTTTCCTCGGAATTATAGCCGTCGGAGCTATTGCGACTACTTGTAACCCGATTTACACTCTCTCTGAACTGACAAAGCAAGTTAGAGATTCGAAACCGAACCTTGTAATTACAGTTGCTGAGTTATGGGACAAAGTGATGAATTTCAATCTCCCGACAGTGTTACTCGGACCAGAAGGATCATTTCCGTCCATATCATCGAATTCGAAGATCCTAACCTTCCATGATTTGGTCCAATTAGGAAGGTCGGAGTCCCATTTTCCGGCTGTAAAAATCAAGCAGACAGACACAGCTGTGCTTTTGTACTCATCGGGAACAACAGGTACTAGTAAGGGGGTGATTCTATCTCACAGAAATTTCATATCGGCGTCTCAAATGATTGTATTGGACCAAATAATGGCTGGAGAAATGCACAATGTTTTCGTCAACGTTTTGCCTCTATTTCATGTTTTTGGACTGTGTTGTATTACATTTGCACAGCTTCAGAAAGGCAATGCTGTTGTGATCATGTCTAAATTCGAATTCGAAAAGTTGCTATCGGCGGTGGAGAAGTATAAGGTCACTGATATGTGGATTGTGCCTCCAATCGTGCTGGCTTTGGCCAAGCAAAGTGTGGTTAAGAAGTATAATCTTTCCTCATTGAGGAATATAGGTTCTGGGGCGGCACCTTTGGGCAAAGATTTAATGGAGGAGTGTGCTAAGAACATTCCCACTGCTAAAGTTTCTCAGGGATATGGTATGACCGAAACTTGTGGAATCATCGCTTTGGAGAACCTGGATGTGGGACTTCGAAATACCGGTACTGCTGGAACACTTGCCGGAGGAGTCGAGGCTCAAATAGTCAGTGTTGATACTCTGAAGCCTCTCCCTCCTAATCAAATGGGAGAGATTTGGGTTCGAGGACCTAATATGATGCAAGATCTTATTGCACTCTGTGTTCACGTTAACATGCTTCATTCAGGTTATTTCAACAATCCTCAGGCCACAAGGCAGACCATCGATCGGAACGGCTGGGTACATACAGGAGATCTCGGATATTTTGATGACGATGGCCGTCTTTTTGTTGTCGATCGAATTAAAGAGCTTATCAAGTACAAAGGTTTTCAGATTGCACCGGCCGAGCTCGAAGGGCTACTAGTATCTCACCCGGAAATATTAGATTCCGTTGTTATCCCATTCCCGGATGCCAAAGCCGGAGAGGTACCGATTGCATACGTTGTCCGCTCTCCCAACAGCACACTCACAGAAGAAGACATCATGGAATTCATTGCCAAACAGGTGGCATCGTTCAAGAGATTACGAAGGGTGACGTTCGTGAACAACGTACCAAAGTCGGCCTCCGGGAAAATCCTGAGGCGAGAGCTGATCGAGAAAGTTCGAGCCAAAATTTGA 1674 45.52 MEKSGYGRDGVFRSLRPPLVLPQDPDLSMVSFLFRNSSSYSHKPALIDADSSETLSFSQLKSMVIKVSHGLLHLGIKKNDVVLILAPNSIQFPICFLGIIAVGAIATTCNPIYTLSELTKQVRDSKPNLVITVAELWDKVMNFNLPTVLLGPEGSFPSISSNSKILTFHDLVQLGRSESHFPAVKIKQTDTAVLLYSSGTTGTSKGVILSHRNFISASQMIVLDQIMAGEMHNVFVNVLPLFHVFGLCCITFAQLQKGNAVVIMSKFEFEKLLSAVEKYKVTDMWIVPPIVLALAKQSVVKKYNLSSLRNIGSGAAPLGKDLMEECAKNIPTAKVSQGYGMTETCGIIALENLDVGLRNTGTAGTLAGGVEAQIVSVDTLKPLPPNQMGEIWVRGPNMMQDLIALCVHVNMLHSGYFNNPQATRQTIDRNGWVHTGDLGYFDDDGRLFVVDRIKELIKYKGFQIAPAELEGLLVSHPEILDSVVIPFPDAKAGEVPIAYVVRSPNSTLTEEDIMEFIAKQVASFKRLRRVTFVNNVPKSASGKILRRELIEKVRAKI 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 39269528 39272557 - BLOR12475 Blo03g01294 58758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01294 557 Gene3D - 455 556 IPR045851 -
Blo03g01294 557 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 556 - -
Blo03g01294 557 Pfam AMP-binding enzyme C-terminal domain 468 543 IPR025110 -
Blo03g01294 557 ProSitePatterns Putative AMP-binding domain signature. 194 205 IPR020845 -
Blo03g01294 557 Gene3D - 10 454 IPR042099 -
Blo03g01294 557 SUPERFAMILY Acetyl-CoA synthetase-like 23 555 - -
Blo03g01294 557 Pfam AMP-binding enzyme 35 459 IPR000873 -
Blo03g01294 557 CDD 4CL 21 549 - -
Blo03g01294 557 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 556 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01294 Blo03g01079 ECH
Blo03g01079 Blo03g01294 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01294 Blo-Chr3:39269528 Blo09g00224 Blo-Chr9:10083214 1.02E-136 dispersed
Blo03g01361 Blo-Chr3:40058570 Blo03g01294 Blo-Chr3:39269528 6.25E-14 transposed
Blo14g00444 Blo-Chr14:5227190 Blo03g01294 Blo-Chr3:39269528 2.85E-21 transposed
Blo17g00714 Blo-Chr17:20865662 Blo03g01294 Blo-Chr3:39269528 1.79E-157 transposed
Blo03g01079 Blo-Chr3:37191931 Blo03g01294 Blo-Chr3:39269528 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01294 K01904 - fve:101299638 850.121