Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01300 ATGGGTCAAATTCAGTATTCGGATAAGTACTTTGATGACACAAATGAATACAGGCATGTTGTGCTTCCGCCTGATGTAGCCAAATTGCTCCCAAAGAATCGTCTTCTGACTGAAAATGAATGGCGAGCAATCGGGGTTCAACAGAGCCGTGGGTGGGTACATTACGCGATACATCGTCCAGAGCCACACATCATGTTATTCAGGAGGCCATTGAACTATCAACAACAGCAGGAAAATCAGTCCCAGCAAGCTAAG 255 45.49 MGQIQYSDKYFDDTNEYRHVVLPPDVAKLLPKNRLLTENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQSQQAK 85
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 39330699 39331443 - BLOR12481 Blo03g01300 58764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01300 85 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 84 - -
Blo03g01300 85 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Blo03g01300 85 Gene3D - 1 84 IPR036858 GO:0016538
Blo03g01300 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Blo03g01300 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Blo03g01300 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Blo03g01300 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Blo03g01300 85 SUPERFAMILY Cell cycle regulatory proteins 1 82 IPR036858 GO:0016538
Blo03g01300 85 SMART CKS_2 3 72 IPR000789 GO:0016538
Blo03g01300 85 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 84 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01072 Blo03g01300 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01072 Blo-Chr3:37121528 Blo03g01300 Blo-Chr3:39330699 3.64E-44 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01300 K02219 - atr:18436534 156.377