Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01303 ATGGCTTTGACTCCATGGCCGCATTTCCTTCAAGTTCCAGTTCACTCGATCTATCCATCGTTTCATTGTCTACTTTACGCCGATGCTGTCTCTGTATCAAGCTTCTTTTCTCAATATGCATGTCTTCCTTCTCTGACTGCTGCGCGGAGCGGGGTCTCGTTGGTCCCAACTGTAGTGAAGGCCCCGTCCAGAGTGAAGCGTTTTGCGAAGTCCACAGAGGAGGAGCAGTTAAGTGGTTCGGAAATTCTAGCTGCCGAAGTTGGCGGAAGGAGTGAGCTTGATGATGAGAGTACCGCTCAATATCCAAGTTCGGAATCCGTTACTGGTCCTGCGCGGAGGATTCTTCCGTCATCGTCGAGTGATTCACTTTTGCTTGGGATTCGAGAGCCGGTTTATGAGGTGGTAGAAGTGAAATCAAATGGATCGGTATCCACTCAAAAGATTAACAGGCGTCAGTTGTTGAAGTTGAGTGGTCTTCGCCCACGTGATATCCGGAGTGTAGATCCTTCTTTGTTTTTGACGAACTCGATGCCTTCATTGTTGGTTCGTGAGCATGCTATTTTACTTAATCTGGGATCTTTGCGAGCGATAGCAATGAAGGAGTGTGTCCTCATATTTGACTATAACGGTAAAGGAGGGCAAGCTTTTATCGAGTCACTATTGCCTCGGTTGAACCTTAAAGGCATGAATGGGGGGCCATCAATGCCATTTGAACTTGAGGTTGTTGAAGCGGCATTGCTGTCCCGAACACAGAGGTTAGAGCAGAGACTAATGAATGTAGAACCTCGTGTTCAAGCTCTACTTGAGGTTTTGCCTACCAAATTAACTGCTGATGTATTGGAACAACTTCGCATTAGCAAGCAGACCTTGGTTGAACTGGGATCCAGAGCTGGGGCACTCAGACAAATGTTGCTTGATCTTCTGGAGGATCCTCATGAAATCCGTCGCATTTGCATTATGGGGAGAAATTGTACATTGAAGAAAGGAAGTGACGATGTTGAATGTTCTGTCCCTTCAGAAAAGCAAATTGCTGAGGAAGAAGAGGAAGAAATTGAGATGCTTCTGGAAAATTATCTTCAAAGATGCGAATCTTGTCATGGTCAGGCTGAAAGACTTCTGGACTCTGCAAAAGAAATGGAAGATTCTATTGCTGTCAATTTGAGCTCGAGGAGGTTGGAGGTCAGCAAAGTCGAACTACTTCTTCAAGTAGGGACGTTTTGTGTGGCAGTTGGTGCTTTAGTTGCAGAGACAAAATTAGAGTTCAATCGAATGACTGTGTTTCCGTCTTTGGAGGAGAAGTCTTTGAAAGCCATAGTCAACGAGAGTTTAATTACTGAATCCCATGTCAATGTCTTTGCCTTTCCTGTTTGCAGGAACGCTCAAGCTGCGAAGTTTGCCGTCTTCGTCATCTCCTCGATGACAGTGGCGATCAGAGTGGTGTCTTGCGCTGTGAGACACTGCGTGTTCGCGCCGAATTTCTCTTCTCTCGGCAGTATTCTTGGAAATTCATTTTTACTCCATGGTGATCTGAGTGAGGGCTTTGAGAGCTCCAGGATATTCTTTTTGGTCCCGTTTTTGCTGTCCCAAGGTGGTGCAATGGATTTGTCCAAGGTCGGGGAAAAGATTTTGAGTTCGGTGAGGTCTGCCAGATCGCTCGGCCTTCTTCCTTCTACATCCGATCGGCCTGAGGTACCGGCACGGGCTGCCGCAGCAGCCGCCGTCGCCCGTGCACTTGCAGGATTGCCTCCTCATCAAAGGTTTAACATTGCTTCTAGCTCAGAGGAATTAAGTTCGATATATGGAAGTAGAAATCACAGTGAAGTGGTGGAGGAACTTGAGGAATCTTTCTATGAGGAGGACTTTGATCCAGTTGGTCATATTTTAGAGCAAATCGAATCAGAAGAGAATGAACTAGCTTATTTTGAGCAACAGGCTGCTATCAGATTAGCGCAACTGGATAGAGTGACAGAACAGTTATCCTGCCATGTGATGGAGCATTATGAAGTGATGGTGAAGGGGATGGATTTGGTAAGGGAATTGGAGAAAGACTTGAAGGTTGCAAATGTCATCTGCAGGAATGGAAGAAGACACCTAACCTCATCCGTACATGAAGTTTCGAGAGATCTCATAATAAACTCTAATTCAAAAAGGAAGCAAGCACTATTGGACATGCTTCCTGTTTTAGCCGAGCTGCGTCATGCAATGGACATGCAAGCATCCCTTGAATCTCTTGTTGAGGAAGGAAACTACTTCGGGGCTTTCCAAGTCTTATCCGAATACTTACAGCTCTTAGATAGTTTTTCAGAGTTCTCGGCAATACAAGAGATGAGCCGTGGTGTAGAGATATGGCTGGGAAGGACGCTGCAGAAGTTGGATTCGTTGTTGTTAGGAGTGTGTCAGGAATTCAAGGAGGAGAGCTACTTAGTTGTGATTGATGCATATGCACTCATTGGGGATGTCTCTGGTCTAGCTGAAAAGATACAAAGCTTCTTTATGCAGGAAGTGATATCAGAAAGCTACTCTGTGTTGAAGAGTATTATGCTAGAGGATTCAACAGCCCAAACTTCAATTGCGATTCCCAAAGGGGATTCAGACAAAAAAACTCCTGATTTTCAAGGAGTTAACTTCTCTTCTTCTGAGCGGAAGGAAACAGTAAGTACATCTTCAGTTGAGACGGCATCCATTTGCTCTTTGGTTGGAACTACTCAAACGACTGATGAGACTCAGACGGATAGCACTACAGCATCAACTAGTGGATCCCCTTGGTACTATTTGCGCAAAGATGCTATTGCTTTTGTTTCACAAACCCTTCAAAGAGGATGTAAAAATTTTTGGCAACTCACAACTAGCCGTGTGTCAGTACTTCTTTCTTCTGCGGCTGTTTGTTCTACCAGTATGCACCAATTCTTGAAAATTTATGAAGATCTGAATCTCTTCATCTTGGCTGGGGAGGCCTTCTGTGGAGTAGAAGCATTTGAGTTTAGGCAAAAGTTGAAGGTTGTTTGTGAAAACTATTTTGTAGCATTTCATAAGCAGAATATACATGCACTTCAAATGGTTTTGGAGAAAGAGAGTTGGATGATATTGCCACCAGATACAGTTCATATTATTAGTTTTGCAGGCCTAGTTGGTGATGGAGCACCCTTAATTGTTCCATCTGATAGTGACTCCAACAATGTCAGGGTTCTTCGTTCAGATAAATCAACAAGCTCCACAAATGCTTATGCTAAAAAGAGTGGATTTGCTTACTGGCTTAAAAGTGGAAATCCATTTTTGCTAAAAGTAACACATATTTCAAAAGAAAGTCATCTTTCAGCCATTGTTAATGGAGAAGCTTATGGTGAGGTTGATGGTAATTTTAGCCCAAACTCTCATAATAATCATTCTATGCAAAATAGTGATAGAAATCATGTGAACAACAAGACATCAGTTTTGGAGGATGAAAATGAAGATCTTTTAGCCGACTTCATCGATGAGGACAGTCAGCTCCCTAGCCGAACTTCAGAACTCAAGCTTTCCAAAAATCAATCTTTACATTTGAATGGGGATGAAATCGCTGCACAAACAGGATCATCACTTTGTCTGTTAAAGTCAATGGATAAATACGCAAGGTTTATGCAGAAATTAGACATAATTAATGTTGAGTTCTTCAAGGGCATATGTCAGTTGTTCGAGGTGTTCTTTTATTTCACATATGAGGCGTTTGGCCAGCAAAATATTAATTCCAGTGGAAAAGGCTTTAGTGATCCACTAAGTTATAGGCTGACTACGGCATTGACTAGAATTACACAAGATTGTGAGCAGTGGATAAAATCCCACCAGTCATTGTCAACATCTTCAAATGTGTCACTTACTCTTGCTGAAGTCACCCCTAGTCCTCCAGTCATAAATTTTGGTCACATGCAAGGAACATCTTTTGGTCTGAAGGAAAGGTGTGCAGCTGCTGATACTTTATTTCTTATACGGCAAATGATGCTGAGGTCCAAAGCTCATATCCAGTCCATGCTTCTGCAAAAGAATGCATCTGTAATTGAAGATTTCTTTGTGCATATGGTGGATGCTGTGCTGGATCTCACCGAGCACATTCATAGGACCACTGCAAGAATGCTTCTCCATATAAATGGCTATGTTGATCGGATAGCTAATGCCAAATGGGAAGTAAAAGAGCTTGGGCTGGAGCATAATGGGTATGTTGACTTGTTGTTGGGAGAATTTAAGCACTACAAAACAAGGCTTGCTCGTGGAGAAATTCGCAAGGAGTTGCAAGATATCCTCTCGGATTATGGACTTGAAACTGTAGCTGAAACACTTATTGAGGGACTATCACGTGTAAGGAGATGCTCTGATGAAGGACGAGCTCTTATGTCATTGGATCTTCAGGTTTTAATCAACGGGCTGCAACATTTTGTTCCCATGAATGTCAAGCCTAAGTTACAAATAGTTGAAGCCTTCATCAAGGCTTACTACCTCCCGGAAACTGAGTATGTTCACTGGGCTCGTGCTCACCCGGAATACACCAAGAATCAGATTCTGGGCCTGGTTAACCTGGTTGCCACGATGAAAGGGTGGAAGAGAAAAACCAGACCTCCACAAGCTAGTAGAGATGACGAAGAAGAAGAAGAAAAGAAAGGTGTAATAATGGAGGCCTTGCAATATGAACTGGTAAAGAGACCTTCGAGATCAGATGTGGCCTCGCATCATCGTCTCCGTGGGATGGACGACAGTCAGGGGTGGGAAGAATTTGGCCCAGAGCAATGA 4758 43.48 MALTPWPHFLQVPVHSIYPSFHCLLYADAVSVSSFFSQYACLPSLTAARSGVSLVPTVVKAPSRVKRFAKSTEEEQLSGSEILAAEVGGRSELDDESTAQYPSSESVTGPARRILPSSSSDSLLLGIREPVYEVVEVKSNGSVSTQKINRRQLLKLSGLRPRDIRSVDPSLFLTNSMPSLLVREHAILLNLGSLRAIAMKECVLIFDYNGKGGQAFIESLLPRLNLKGMNGGPSMPFELEVVEAALLSRTQRLEQRLMNVEPRVQALLEVLPTKLTADVLEQLRISKQTLVELGSRAGALRQMLLDLLEDPHEIRRICIMGRNCTLKKGSDDVECSVPSEKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSKVELLLQVGTFCVAVGALVAETKLEFNRMTVFPSLEEKSLKAIVNESLITESHVNVFAFPVCRNAQAAKFAVFVISSMTVAIRVVSCAVRHCVFAPNFSSLGSILGNSFLLHGDLSEGFESSRIFFLVPFLLSQGGAMDLSKVGEKILSSVRSARSLGLLPSTSDRPEVPARAAAAAAVARALAGLPPHQRFNIASSSEELSSIYGSRNHSEVVEELEESFYEEDFDPVGHILEQIESEENELAYFEQQAAIRLAQLDRVTEQLSCHVMEHYEVMVKGMDLVRELEKDLKVANVICRNGRRHLTSSVHEVSRDLIINSNSKRKQALLDMLPVLAELRHAMDMQASLESLVEEGNYFGAFQVLSEYLQLLDSFSEFSAIQEMSRGVEIWLGRTLQKLDSLLLGVCQEFKEESYLVVIDAYALIGDVSGLAEKIQSFFMQEVISESYSVLKSIMLEDSTAQTSIAIPKGDSDKKTPDFQGVNFSSSERKETVSTSSVETASICSLVGTTQTTDETQTDSTTASTSGSPWYYLRKDAIAFVSQTLQRGCKNFWQLTTSRVSVLLSSAAVCSTSMHQFLKIYEDLNLFILAGEAFCGVEAFEFRQKLKVVCENYFVAFHKQNIHALQMVLEKESWMILPPDTVHIISFAGLVGDGAPLIVPSDSDSNNVRVLRSDKSTSSTNAYAKKSGFAYWLKSGNPFLLKVTHISKESHLSAIVNGEAYGEVDGNFSPNSHNNHSMQNSDRNHVNNKTSVLEDENEDLLADFIDEDSQLPSRTSELKLSKNQSLHLNGDEIAAQTGSSLCLLKSMDKYARFMQKLDIINVEFFKGICQLFEVFFYFTYEAFGQQNINSSGKGFSDPLSYRLTTALTRITQDCEQWIKSHQSLSTSSNVSLTLAEVTPSPPVINFGHMQGTSFGLKERCAAADTLFLIRQMMLRSKAHIQSMLLQKNASVIEDFFVHMVDAVLDLTEHIHRTTARMLLHINGYVDRIANAKWEVKELGLEHNGYVDLLLGEFKHYKTRLARGEIRKELQDILSDYGLETVAETLIEGLSRVRRCSDEGRALMSLDLQVLINGLQHFVPMNVKPKLQIVEAFIKAYYLPETEYVHWARAHPEYTKNQILGLVNLVATMKGWKRKTRPPQASRDDEEEEEKKGVIMEALQYELVKRPSRSDVASHHRLRGMDDSQGWEEFGPEQ 1585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 39345765 39374096 - BLOR12484 Blo03g01303 58767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01303 1585 Coils Coil 337 361 - -
Blo03g01303 1585 MobiDBLite consensus disorder prediction 1558 1585 - -
Blo03g01303 1585 Gene3D Magnesium transport protein CorA, transmembrane region 209 392 - -
Blo03g01303 1585 MobiDBLite consensus disorder prediction 1559 1577 - -
Blo03g01303 1585 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 899 1528 - -
Blo03g01303 1585 MobiDBLite consensus disorder prediction 858 883 - -
Blo03g01303 1585 Pfam Protein of unknown function C-terminus (DUF2451) 1306 1527 IPR019514 -
Blo03g01303 1585 Gene3D - 127 208 - -
Blo03g01303 1585 PANTHER UNCHARACTERIZED 899 1528 IPR040047 GO:0032456|GO:0042147|GO:1990745
Blo03g01303 1585 PANTHER UNCHARACTERIZED 503 852 IPR040047 GO:0032456|GO:0042147|GO:1990745
Blo03g01303 1585 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 503 852 - -
Blo03g01303 1585 CDD Mrs2_Mfm1p-like 134 415 IPR039204 -
Blo03g01303 1585 MobiDBLite consensus disorder prediction 96 114 - -
Blo03g01303 1585 Pfam Vacuolar-sorting protein 54, of GARP complex 609 855 IPR019515 -
Blo03g01303 1585 MobiDBLite consensus disorder prediction 90 114 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01303 Blo-Chr3:39345765 Blo10g00506 Blo-Chr10:11257200 1.32E-11 dispersed
Blo03g01303 Blo-Chr3:39345765 Blo03g01242 Blo-Chr3:38647699 2.35E-06 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01303 K23288 - csv:101206276 1380.16