Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01315 ATGGAGCCGTCGGTCGAGGACCTCGCCGACGACCTTCAGAGCATTAGCTTCACATCTACAAACACCAATCGTAGCACCAGTTCCGGCTCCGAAACCACTCTCACGGCTTCCTCTTCCGCTCACCTTGGCTCTCTTCCCTCTCTCGTGAACAAACCACACGCCCCCTCCTCCGATCCTTGCTGGTCCGCCATTAATCTGATCCACTCGGAATGCCCCACCCGACACATCGCACTTTCCGACCTCAAGTTCTCCTATCGTCTCGGCTCTGGTGACATCGGCTCCGTCTACTTAACAGAACTGAAGTGCTCCGGTGCGGATGGTTGCGTTTTCGCAGCTAAGGTAATGGATAAGAAGGAATTAGTAAGCCGGAGCAAAGAAGGGCGAGCAAGGACAGAGATGGAAATACTGGAGATGTTGGACCACCCGTTTTTGCCCACGCTCTACGCGAGTATAGACACGTCTAGGTGGCTCTGCCTCTTGACAGAGTTCTGCCCCGGCGGTGACCTTCACGTGCTCCGGCAACGCCAGCCTAACAAACGCTTCGATGAGCCTGCTGTCAGGTTTTATGCATCAGAGGTGTTGGTTGCTTTGGAGTACCTCCACATGAAGGGGATAGTTTATCGCGATCTTAAGCCGGAAAATGTGCTTGTTTGGTCGGACGGTCATATCATGCTCACGGATTTCGATCTCTCGTTAAAGTGCGAAGATTCTACCTCAACACCACAGGTGATTACAGACCAAAACCCAGCGAATTCAGCCCCACAGAGAGGCTACTTTGCTGATCGTCCTCCGTTTGCATCATCTTCGTGTATTATTCCAAGCTGCATGTTACCTGCCGTTTCTTGCTTTAACCCAAAAGCCAAGCGAAAGAAGAAACAGAGCAATCGGAGCCGGCCCGAGTTTGTTGCCGAGCCGGTCGATGTCCGTTCGATGTCGTTCGTCGGGACCCACGAGTATTTGGCACCGGAAATTGTCTCCGGCGAAGGCCATGGTGGAGCTGTCGACTGGTGGACGCTGGGAATCTTTATGTTTGAACTGTTCTACGGGTTGACTCCATTTAGAGGCGTGGACAATGAGCTGACCTTGGCCAACATAGTTGCCAGAGCCCTCGATTTTCCTAAAGAGCCTACCATTCCGGCATCGGCCAAGGACCTAATTTCTCAGCTGCTCATCAAAGACCCTCCCCGGCGGCTGGGGTCCACGATGGGATCATCCGCGATCAAGCACCACCCATTTTTCCAAGGGGTCAATTGGGCATTGCTGAGATGCACACCACCACCCTTCATTCCATCACCATTTACCAGAGAAGTTGCTGCAGATGAGACCTGCCCCGAGACCCCAATGGACTACTACTAA 1356 53.02 MEPSVEDLADDLQSISFTSTNTNRSTSSGSETTLTASSSAHLGSLPSLVNKPHAPSSDPCWSAINLIHSECPTRHIALSDLKFSYRLGSGDIGSVYLTELKCSGADGCVFAAKVMDKKELVSRSKEGRARTEMEILEMLDHPFLPTLYASIDTSRWLCLLTEFCPGGDLHVLRQRQPNKRFDEPAVRFYASEVLVALEYLHMKGIVYRDLKPENVLVWSDGHIMLTDFDLSLKCEDSTSTPQVITDQNPANSAPQRGYFADRPPFASSSCIIPSCMLPAVSCFNPKAKRKKKQSNRSRPEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGGAVDWWTLGIFMFELFYGLTPFRGVDNELTLANIVARALDFPKEPTIPASAKDLISQLLIKDPPRRLGSTMGSSAIKHHPFFQGVNWALLRCTPPPFIPSPFTREVAADETCPETPMDYY 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 39488366 39491304 + BLOR12496 Blo03g01315 58779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01315 451 SMART serkin_6 81 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g01315 451 CDD STKc_phototropin_like 79 432 - -
Blo03g01315 451 SUPERFAMILY Protein kinase-like (PK-like) 58 438 IPR011009 -
Blo03g01315 451 Gene3D Transferase(Phosphotransferase) domain 1 168 239 - -
Blo03g01315 451 Gene3D Phosphorylase Kinase; domain 1 79 167 - -
Blo03g01315 451 ProSiteProfiles Protein kinase domain profile. 81 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g01315 451 PANTHER FLIPPASE KINASE 1-RELATED 1 451 - -
Blo03g01315 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Blo03g01315 451 Pfam Protein kinase domain 310 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g01315 451 Pfam Protein kinase domain 85 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g01315 451 PANTHER OS11G0150700 PROTEIN 1 451 - -
Blo03g01315 451 Gene3D Transferase(Phosphotransferase) domain 1 309 431 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01315 Blo14g00222 CCT
Blo03g01315 Blo03g01058 ECH
Blo03g01315 Blo14g00222 ECH
Blo03g01058 Blo03g01315 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01315 Blo-Chr3:39488366 Blo11g00163 Blo-Chr11:1283245 6.07E-146 dispersed
Blo01g01202 Blo-Chr1:45013736 Blo03g01315 Blo-Chr3:39488366 1.25E-134 wgd
Blo13g00690 Blo-Chr13:29641237 Blo03g01315 Blo-Chr3:39488366 5.39E-11 wgd
Blo03g01058 Blo-Chr3:36962781 Blo03g01315 Blo-Chr3:39488366 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84207 PF00069 Pkinase 2.20E-34 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01315 K08286 - csv:101207262 723.776