Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01344 ATGGCAGCACAGGCTTTGGTATCTTCGTCTCTAACCTCTTCCGTTGGAGCAGGAAGGCGTGAACTTGGAGGGAGACCTTCGTTTCAGTCGAGAAAATCGGCTTCTTTTGTAGTCAGAGCCGAAGCTACTCCCCCTGTTAAGCAAGGAGCCGATCGACAGTTATGGTTTGCATCGAAACAGAGCCTTTCATACTTGGACGGCAGTCTTCCCGGGGACTATGGATTTGATCCGTTGGGACTCTCCGATCCAGAAGGAACTGGAGGATTCATCGAACCAAAATGGCTAGCCTACGGAGAAGTAATCAACGGCCGCTACGCAATGCTAGGCGCTTTTGGAGCCATAGCGCCAGAAATTTTAGGAAAACTCGGCCTCATCCCACCGGAAACCGCCCTTCCATGGTTCAAAACTGGTGTAATCCCCCCGGCCGGAACCTACAACTACTGGGCTGATTCTTACACGCTCTTCGTCTTCGAAATGGCACTAATGGGATTCGCCGAGCACAGAAGATTCCAAGACTGGGCGAATCCAGGATCAATGGGAAAACAATACTTCCTAGGGTTGGAAAAATACTTGGGAGGATCGGGAAACCCAATCTATCCAGGAGGGCCATTGTTCAACCCTCTAGGGTTTGGGAAAGACGAGAAATCTATGAAGGACTTGAAACTGAAAGAGGTGAAAAACGGGAGACTGGCGATGCTAGCAATTTTGGGTTACTTCGTCCAGGCTCTGGTGACCGGAGTTGGACCATTCCAGAACCTGCTGGATCATTTGGCTGACCCTGTCAACAACAATATCTTGACCAGTCTCAAGTTCCAC 816 50.12 MAAQALVSSSLTSSVGAGRRELGGRPSFQSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAFGAIAPEILGKLGLIPPETALPWFKTGVIPPAGTYNYWADSYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKYLGGSGNPIYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPFQNLLDHLADPVNNNILTSLKFH 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 39802686 39803700 - BLOR12525 Blo03g01344 58808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01344 272 Pfam Chlorophyll A-B binding protein 63 242 IPR022796 -
Blo03g01344 272 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 271 - -
Blo03g01344 272 Gene3D Chlorophyll a/b binding protein domain 53 271 - -
Blo03g01344 272 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 271 IPR001344 GO:0009765|GO:0016020
Blo03g01344 272 SUPERFAMILY Chlorophyll a-b binding protein 51 268 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01344 Blo-Chr3:39802686 Blo09g00381 Blo-Chr9:14647042 5.45E-51 dispersed
Blo03g01011 Blo-Chr3:36411646 Blo03g01344 Blo-Chr3:39802686 2.94E-160 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01344 K08909 - csv:101202993 505.368